FC930905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STIAU (Elongation factor Tu OS=Stigmatella aurantiaca GN=tuf PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 42/105 (40.00%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASN 411 L+ A+D I P+R +DKP +P++DV+ I G GTV GRVE G +K G +V P+ T + VEM + L E + GDN+G ++ + +DL+RG V +N Sbjct: 194 LMAAVDEYIPTPQRATDKPFLMPVEDVFSIAGRGTVATGRVERGKIKVGEEVEIVGIRPTQKTV-ITGVEMFRKLLDEGMAGDNIGALLRGLKREDLERGQVLAN 297
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_SALAI (Elongation factor Tu OS=Salinispora arenicola (strain CNS-205) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 48/164 (29.27%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 109 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+ A+D +I +P+R ++KP +P++DV+ I G GTV GR E G+LKP +V T +EM + L EA G+NVG ++ V +D++RG V K A F + V I++ + G + P + + +++ + G E+ Sbjct: 194 LMTAVDTSIPQPERETEKPFLMPIEDVFTITGRGTVVTGRAERGILKPNEEVELVGIREKSTKTTCTGIEMFRKLLDEARAGENVGLLLRGVKREDVERGMVV--IKPGTATPHTEFEATVYILSK--EEGGRHTPFFQNYRPQFYFRTTDVTGVVTLPEGTEM 353
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_RHDSA (Elongation factor Tu, chloroplastic OS=Rhodomonas salina GN=tufA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 106 TLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 T+ + +D I+E P+R +DK + ++DV+ I G GTV GR+E G +K G + GL TT + +EM ++L+EAL GDNVG V+ + D++RG V Sbjct: 198 TIFELMDKIDEYIPTPERETDKSFLMAVEDVFSITGRGTVATGRIERGQVKVGDTIEI--IGLRETRTTTITGLEMFQKSLEEALAGDNVGILVRGIQKTDIERGMV 302
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_PSYIN (Elongation factor Tu OS=Psychromonas ingrahamii (strain 37) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 53/165 (32.12%), Postives = 80/165 (48.48%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L DALD I P+R DKP LP++DV+ I G GTV GRVE G++K G V GL VK+ VEM + L E G+NVG ++ D++RG V +K + F +V I++ G + P + + +++ ++ G E+ Sbjct: 192 LADALDTYIPLPERDIDKPFILPIEDVFSIAGRGTVVTGRVERGIIKVGQEVEI--IGLRPTVKTTCTGVEMFRKLLDEGRAGENVGILLRGTKRDDVERGQVL--AKPGSIKPHTKFEGEVYILSK--DEGGRHTPFFKGYRPQFFFRTTDITGAVELPEGVEM 350
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_PSEA6 (Elongation factor Tu OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF-GPSGLTTE-VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L +ALD+ I EP+R DKP LP++DV+ I G GTV GRVE G++ G V G TT V VEM + L E G+N+G ++ +D++RG V +K F ++V +++ G + P + + +++ ++ G E+ Sbjct: 192 LAEALDSYIPEPERDIDKPFLLPIEDVFSISGRGTVVTGRVERGIVNTGDAVEIVGMKDTTTSTVTGVEMFRKLLDEGRAGENIGALLRGTKREDVERGQVL--AKPGSINPHTQFEAEVYVLSK--DEGGRHTPFFKGYRPQFYFRTTDVTGAVELPEGVEM 350
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_ODOSI (Elongation factor Tu, chloroplastic OS=Odontella sinensis GN=tufA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/146 (33.56%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 40 ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG--LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 468 I + I+R N K L+DA+D I P+R +K + ++DV+ I G GTV GR+E GV+K G V G TT + +EM + L E GDNVG ++ V +D++ G V S+ NF S+V ++ Sbjct: 179 IEAISSNPAIKRGDNPWVDKIFALMDAVDEYIPTPERDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGDTVEIVGVGDTQTTTITGIEMFQKTLDEGFAGDNVGILLRGVTREDIEAGMVL--SEPGTITPHTNFESEVYVL 322
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_METCA (Elongation factor Tu OS=Methylococcus capsulatus GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 48/150 (32.00%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN-----HPGQIGNGYAPVLDCHTSHI 531 L+ ALD+ I EP+R D+P +P++DV+ I G GTV GRVE G++K G +V P+ TT VEM + L + GDN+G ++ +D++RG V +K +F +++ +++ NGY P T+ + Sbjct: 194 LVQALDDYIPEPERAIDRPFLMPIEDVFSISGRGTVVTGRVERGIIKVGEEIEIVGIRPTAKTT-CTGVEMFRKLLDQGQAGDNIGVLLRGTKREDVERGQVL--AKPGSITPHTHFEAEIYVLSKEEGGRHTPFFNGYRPQFYFRTTDV 340
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_LACF3 (Elongation factor Tu OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 LLD +D I PKRP+DKP +P++DV+ I G GTV GR++ G +K G +V + + V VEM H+ L GDNVG ++ V+ ++RG V ++ + F +V +M + G + P + +++ I+ G E+ Sbjct: 193 LLDVVDEYIPTPKRPTDKPFMMPVEDVFTITGRGTVASGRIDRGTVKIGDEVEIVGLKEDVIKSTVTGVEMFHKTLDLGEAGDNVGILLRGVSHDQIERGQVL--AEPGSIQTHKQFKGEVYVMTK--EEGGRHTPFFSNYRPQFYFHTTDVTGTIELPDGVEM 352
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_HUMAN (Elongation factor Tu, mitochondrial OS=Homo sapiens GN=TUFM PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 61/192 (31.77%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFS---ELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVE 666 LLDA+D I P R +KP LP++ VY + G GTV G +E G+LK G + + T V +EM H++L+ A GDN+G V+ + +DL+RG V K + +QV I++ + G + P + + + V FS ++ +I KEL + LK +I QPM++E Sbjct: 239 LLDAVDTYIPVPARDLEKPFLLPVEAVYSVPGRGTVVTGTLERGILKKGDECELLGHSKNIRTVVTGIEMFHKSLERAEAGDNLGALVRGLKREDLRRGLVM--VKPGSIKPHQKVEAQVYILSK--EEGGRHKPFV---SHFMPVMFSLTWDMACRIILPPEKELAMPGEDLK------FNLILRQPMILE 417
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_DEISP (Elongation factor Tu OS=Deinonema sp. GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 54/152 (35.53%), Postives = 78/152 (51.32%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN------HPGQIGNGYAPVLDCHTSHI 531 LLDA+D+ I P+R +DK +P++DV+ I G GTV GRVE GV+K V GL T V +EMH + L + GDNVG ++ VA D++RG V +K + F + V +++ H G GY P T+ + Sbjct: 203 LLDAVDSYIPTPERATDKTFLMPVEDVFTITGRGTVATGRVERGVVKVQDEVEI--IGLRDTKKTTVTGIEMHRKLLDSGMAGDNVGVLLRGVARDDVERGQVL--AKPGSIKPHTKFEASVYVLSKDEGGRHSAFFG-GYRPQFYFRTTDV 349 The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bpback to top |