FC930905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_BREBN (Elongation factor Tu OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 42/125 (33.60%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 471 L++A+D+ I P+R +DKP +P++DV+ I G GTV GRVE G++K G ++ T V VEM + L +A GDN+G ++ V D++RG +K + F ++V +++ Sbjct: 193 LMEAVDSYIPTPERATDKPFLMPVEDVFTITGRGTVATGRVERGIVKVGDQVEIIGLAEETKNTTVTGVEMFRKLLDQAQAGDNIGALLRGVDRNDIERG--QCLAKPGSVKPYTKFKAEVYVLS 315
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_BORHD (Elongation factor Tu OS=Borrelia hermsii (strain DAH) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/144 (34.03%), Postives = 71/144 (49.31%), Query Frame = 1 Query: 10 INPEKVPFVPISGFEGDNMIERSTNLDWYKGPT----------LLDALDNINE-PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 + E + V GF GD I + + P LL+ +D+ + P+R DKP L ++DV+ I G GTV GR+E G++K G V T T V VEM + L++ GDNVG ++ V KD++RG V Sbjct: 150 VEVEVLELVEKYGFPGDTPIVKGSAFGAMSNPDDPEATKCIKELLETMDSYFDLPERDIDKPFLLAIEDVFSISGRGTVATGRIERGIIKVGQEVEIVGIRETRKTTVTGVEMFQKILEQGEAGDNVGLLLRGVDKKDVERGQV 293
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_ANOFW (Elongation factor Tu OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/164 (29.88%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++A+D I P+R DKP +P++DV+ I G GTV GRVE G+LK G ++ T V VEM + L +A GDN+G ++ V+ +++RG V +K F +QV ++ + G + P + + +++ I G E+ Sbjct: 192 LMNAVDEYIPTPQREVDKPFMMPVEDVFSITGRGTVATGRVERGILKVGDQVEIIGLSEEPKATTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVQRGQVL--AKPGTITPHTKFKAQVYVLTK--EEGGRHTPFFSNYRPQFYFRTTDVTGIIQLPEGVEM 351
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_AERS4 (Elongation factor Tu OS=Aeromonas salmonicida (strain A449) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 53/190 (27.89%), Postives = 89/190 (46.84%), Query Frame = 1 Query: 40 ISGFEGD-----NMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 + EGD +IE + +LD Y I EP+R D P +P++DV+ I G GTV GRVE G++K G V ++T VEM + L E G+N+G ++ V +D++RG V +K + F S+V +++ + G + P + + +++ I+ G E+ Sbjct: 176 LKALEGDAAWEEKIIELANHLDTY-----------IPEPERAIDLPFLMPIEDVFSIAGRGTVVTGRVERGIVKVGETVEIVGIKDTVSTTCTGVEMFRKLLDEGRAGENIGALLRGVKREDVERGQVL--AKPGSIKPHTKFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_ACTPJ (Elongation factor Tu OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 52/179 (29.05%), Postives = 87/179 (48.60%), Query Frame = 1 Query: 58 DNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 + ++E + +LD Y I EP+R DKP LP++DV+ I G GTV GRVE G++K G V TT+ V VEM + L E G+NVG ++ ++++RG V +K +F S+V +++ + G + P + + +++ I+ G E+ Sbjct: 187 EKILELAHHLDTY-----------IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKSGEEVEIVGIKETTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVL--AKPGTITPHTDFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_ACTP2 (Elongation factor Tu OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 52/179 (29.05%), Postives = 87/179 (48.60%), Query Frame = 1 Query: 58 DNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 + ++E + +LD Y I EP+R DKP LP++DV+ I G GTV GRVE G++K G V TT+ V VEM + L E G+NVG ++ ++++RG V +K +F S+V +++ + G + P + + +++ I+ G E+ Sbjct: 187 EKILELAHHLDTY-----------IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKSGEEVEIVGIKETTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVL--AKPGTITPHTDFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU2_PELTS (Elongation factor Tu 2 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=tuf2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 57/194 (29.38%), Postives = 91/194 (46.91%), Query Frame = 1 Query: 19 EKVPFVPISGFEGDNMIERSTNLDWYKGP-TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM-----NHPGQIGNGYAPVLDCHTSHI--AVKFSELVTKI 564 +++P + S + +W K L+DA+D I P+R DKP +P++DV+ I G GTV GR+E G +K G +V T V VEM + L + GDNVG ++ V K+++RG V +K + +F+++V ++ NGY P T+ + VK E V + Sbjct: 166 DEIPIITGSALKAMECACGKRECEWCKSIWELMDAVDEYIPTPQRAVDKPFLMPVEDVFSITGRGTVATGRIERGQVKVGDEVEIVGLQDKPRKTVVTGVEMFRKILDVGVAGDNVGCLLRGVDRKEIERGQVL--AKPGSIKPHKSFSAEVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGVVKLPEGVEMV 357
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU1_STRCO (Elongation factor Tu-1 OS=Streptomyces coelicolor GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVE 666 L+ A+D I EP+R DKP +P++DV+ I G GTV GR+E GVLK ++ TT V +EM + L E G+NVG ++ + +D++RG V K F +Q I++ G + P + + + +++ + G E+ + GD +K+ QP+ +E Sbjct: 194 LMKAVDEAIPEPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLKVNETVDIIGIKTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERGQVI--IKPGSVTPHTEFEAQAYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTEMKVELIQPVAME 373
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU1_PELTS (Elongation factor Tu 1 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 57/194 (29.38%), Postives = 91/194 (46.91%), Query Frame = 1 Query: 19 EKVPFVPISGFEGDNMIERSTNLDWYKGP-TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM-----NHPGQIGNGYAPVLDCHTSHI--AVKFSELVTKI 564 +++P + S + +W K L+DA+D I P+R DKP +P++DV+ I G GTV GR+E G +K G +V T V VEM + L + GDNVG ++ V K+++RG V +K + +F+++V ++ NGY P T+ + VK E V + Sbjct: 166 DEIPIITGSALKAMECACGKRECEWCKSIWELMDAVDEYIPTPQRAVDKPFLMPVEDVFSITGRGTVATGRIERGQVKVGDEVEIVGLQDKPRKTVVTGVEMFRKILDVGVAGDNVGCLLRGVDRKEIERGQVL--AKPGSIKPHKSFSAEVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGVVKLPEGVEMV 357
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: CYSN_SALNS (Sulfate adenylyltransferase subunit 1 OS=Salmonella newport (strain SL254) GN=cysN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 57/216 (26.39%), Postives = 102/216 (47.22%), Query Frame = 1 Query: 25 VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG--FVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVE 666 + FVP+S EGDN+ +S N+ W+ GPTLL+ L+ ++ + +P+R P+Q V + G + +G +K G + PSG+ + V + +EA G+ + + + D+ RG +A+N PAR AA V + P G Y L + ++ I+ + +++E P NG G+V+M +P+ ++ Sbjct: 200 IRFVPLSALEGDNVAAQSANMRWHSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDI--DISRGDLLLAANETLAPARHAA--IDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLP---LNG-IGLVEMTFDEPLALD 407 The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bpback to top |