FC930905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_TAXOC (Elongation factor Tu OS=Taxeobacter ocellatus GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 52/193 (26.94%), Postives = 93/193 (48.19%), Query Frame = 1 Query: 49 FEGDNM-IERSTNLDWYKGPT--------LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL---KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 F+GDN+ + + + L G L+D++DN I P R +D+P +P++DV+ I G GTV GR+E GV+ +P ++ G L + V VEM + L GDNVG ++ + + ++RG V K F ++V +++ + G + P + + + +++ I G E+ Sbjct: 163 FDGDNIPVVQGSALGGLNGDAKWVGTIEQLMDSVDNWIPIPPRLTDQPFLMPVEDVFSITGRGTVATGRIERGVINSGEPVEILGMGAENLKSTVTGVEMFRKILDRGEAGDNVGLLLRGIEKEAIRRGMVI--CKPGSVTPHKKFKAEVYVLSK--EEGGRHTPFFNNYRPQFYFRTTDVTGIISLAEGVEM 351
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRCJ (Elongation factor Tu OS=Streptomyces cinnamoneus GN=tuf PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 109 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG 396 L+ A+D NI +P+R DKP +P++DV+ I G GTV GR+E GVLK ++ TT V +EM + L E G+NVG ++ + +D++RG Sbjct: 194 LMKAVDENIPQPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLKVNETVDIIGIKTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERG 293
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_PROMM (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9313) GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 19 EKVPFVPISGFEG-DNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 + +P V +SG + + E +D L++A+D +I EP+R +KP + ++DV+ I G GTV GR+E G +K G +V S TT V VEM + L E L GDN G ++ + +D++RG V Sbjct: 166 DDIPIVQVSGLKAIEGEAEWEAKID-----ELMEAVDASIPEPEREIEKPFLMAVEDVFSITGRGTVATGRIERGKVKKGEEIEIVGIRDSRKTT-VTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMV 292
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_OCHA4 (Elongation factor Tu OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 106 TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 +L+ A+D+ I P+RP D+P +P++DV+ I G GTV GRVE G++K G V T T V VEM + L + GDN+G ++ V +D++RG V Sbjct: 188 SLMAAVDDYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKATAKTTVTGVEMFRKLLDQGQAGDNIGALIRGVGREDVERGQV 289
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_MYCGI (Elongation factor Tu OS=Mycobacterium gilvum (strain PYR-GCK) GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 19 EKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 E P V +S EGD +S L+ A+D +I +P R +DKP +P++DV+ I G GTV GRVE GV+ +V P+ T V VEM + L + GDNVG V+ + +D++RG V Sbjct: 167 EDAPVVKVSALKALEGDEKWVKSVQ-------ELMAAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPTVTKTTVTGVEMFRKLLDQGQAGDNVGLLVRGIKREDVERGQV 294
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSW (Elongation factor Tu OS=Geobacillus sp. (strain WCH70) GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 468 L++A+D I P+R DKP +P++DV+ I G GTV GRVE G LK G +V +T V VEM + L +A GDN+G ++ V+ +++RG V +K F +QV ++ Sbjct: 192 LMNAVDEYIPTPQREIDKPFMMPIEDVFSITGRGTVATGRVERGTLKVGDAVEIVGLADEPKSTTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVERGQVL--AKPGSITPHTKFKAQVYVL 313
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_FLAFE (Elongation factor Tu OS=Flavobacterium ferrugineum GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 56/194 (28.87%), Postives = 92/194 (47.42%), Query Frame = 1 Query: 46 GFEGDN--MIERSTN------LDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK---PGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 GF+GDN +I+ S W K L+DA+D+ I P RP D P + ++DV+ I G GTV GR+E G +K P +V S L + V VEM + L E GDN G ++ V ++RG V K +F +V +++ G + P + + + +++ +++ +G E+ Sbjct: 162 GFDGDNTPIIKGSATGALAGEEKWVKEIENLMDAVDSYIPLPPRPVDLPFLMSVEDVFSITGRGTVATGRIERGRIKVGEPVEIVGLQESPLNSTVTGVEMFRKLLDEGEAGDNAGLLLRGVEKTQIRRGMVI--VKPGSITPHTDFKGEVYVLSK--DEGGRHTPFFNKYRPQFYFRTTDVTGEVELNAGTEM 351
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_EUBE2 (Elongation factor Tu OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 54/159 (33.96%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 46 GFEGDN--MIERST-------NLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSV-----EMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 468 GF GD+ +I+ S N +W G +L+ + I+E P+R +DKP +P++DV+ I G GTV GRVE GVL V G+ +++ V EM + L EA PGDN+G ++ V +++RG V K FT+QV ++ Sbjct: 163 GFPGDDTPIIQGSALKALEDPNSEW--GDKILELMHTIDEYVPDPERDTDKPFLMPVEDVFSITGRGTVATGRVERGVLHVNEEVEI--VGIHEDIRKVVVTGIEMFRKLLDEAQPGDNIGALLRGVQRDEIQRGQVL--CKPGSITPHHKFTAQVYVL 315
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_EHRRW (Elongation factor Tu OS=Ehrlichia ruminantium (strain Welgevonden) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 109 LLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++AL+ I+ P R DKP + ++DV+ I G GTV GR+E GV+K G + GL +T VEM H+AL GDN G ++ + +D++RG V S F ++V ++ + G + P + V+ +++ I G E+ Sbjct: 194 LMNALEKIDLPIREKDKPFLMSIEDVFSIPGRGTVVTGRIERGVIKVGDKIDI--VGLRDIQSTVCTGVEMFHKALDAGEAGDNAGILLRGIKKEDVERGQVL--SAPGQIHSYKGFKAEVYVLKK--EEGGRHTPFFSNYQPQFYVRTTDVTGNIKLPDGVEM 351
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_EHRRG (Elongation factor Tu OS=Ehrlichia ruminantium (strain Gardel) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 109 LLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++AL+ I+ P R DKP + ++DV+ I G GTV GR+E GV+K G + GL +T VEM H+AL GDN G ++ + +D++RG V S F ++V ++ + G + P + V+ +++ I G E+ Sbjct: 194 LMNALEKIDLPIREKDKPFLMSIEDVFSIPGRGTVVTGRIERGVIKVGDKIDI--VGLRDIQSTVCTGVEMFHKALDAGEAGDNAGILLRGIKKEDVERGQVL--SAPGQIHSYKGFKAEVYVLKK--EEGGRHTPFFSNYQPQFYVRTTDVTGNIKLPDGVEM 351 The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bpback to top |