FC930905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_EHRCR (Elongation factor Tu OS=Ehrlichia chaffeensis (strain Arkansas) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 109 LLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++AL+ I+ P R DKP + ++DV+ I G GTV GR+E GV++ G + GL +T VEM H+AL GDN G ++ + +D++RG V S F ++V I+ + G + P + V+ +++ I G E+ Sbjct: 194 LMNALEKISLPTREKDKPFLMSIEDVFSIPGRGTVVTGRIERGVIRVGDKIEI--VGLRDIQSTVCTGVEMFHKALDAGEAGDNAGILLRGIKKEDVERGQVL--SAPGQIHSYKKFKAEVYILKK--EEGGRHTPFFSNYQPQFYVRTTDVTGSIKLPEGVEM 351
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_DESVV (Elongation factor Tu OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 54/166 (32.53%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKD-DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 LL A D+ I EP+R DKP +P++DV+ I G GTV GRVE GV+K G V G+ KS VEM + L + GDN+G ++ V D++RG V + K P R+ F ++V +++ + G + P + + +++ I G E+ Sbjct: 195 LLAACDSYIPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEVEI--VGIKDTTKSTCTGVEMFRKLLDQGQAGDNIGALLRGVKRDDVERGQVLAAPKSITPHRK---FKAEVYVLSK--EEGGRHTPFFSGYRPQFYFRTTDITGVITLEEGVEM 353
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_DESVH (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 54/166 (32.53%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKD-DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 LL A D+ I EP+R DKP +P++DV+ I G GTV GRVE GV+K G V G+ KS VEM + L + GDN+G ++ V D++RG V + K P R+ F ++V +++ + G + P + + +++ I G E+ Sbjct: 195 LLAACDSYIPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEVEI--VGIKDTTKSTCTGVEMFRKLLDQGQAGDNIGALLRGVKRDDVERGQVLAAPKSITPHRK---FKAEVYVLSK--EEGGRHTPFFSGYRPQFYFRTTDITGVITLEEGVEM 353
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_DESDA (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 52/164 (31.71%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 LLDA D+ I EP R DKP +P++DV+ I G GTV GRVE GV+K G +V P+ TT VEM + L + GDN+G ++ D++RG V + K + F ++V +++ + G + P + + +++ I G E+ Sbjct: 195 LLDACDSFIPEPVRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEVEIVGIKPTVKTT-CTGVEMFRKLLDQGEAGDNIGALLRGTKRDDVERGQVLAAPKSITPHK--KFKAEVYVLSK--EEGGRHTPFFTGYRPQFYFRTTDITGVISLPEGVEM 353
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_CODFR (Elongation factor Tu, chloroplastic OS=Codium fragile GN=tufA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 50/190 (26.32%), Postives = 96/190 (50.53%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVET 669 L++ +D I PKR ++KP + +++V I G GTV GRVE G+++ G V T E + +EM H+ L++++ GDNVG ++ + ++++RG V +K +F +QV I+ + G + + V+ +++ I GK + + + GD +++ +P+ +ET Sbjct: 201 LMETVDEYIPTPKRDTEKPFLMAIENVVSITGRGTVATGRVERGMIEVGQTVELVGLKNTKEAIITGLEMFHKTLEKSVAGDNVGILLRRIQKEEIQRGMVL--AKPSSILPHQHFKAQVYILKK--EEGGRHTSFFAGYRPQFYVRTTDVTGHIKTFQGKIDNTQIQMVMPGDRIQMEVELIRPIAIET 386
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_CHLFF (Elongation factor Tu OS=Chlamydophila felis (strain Fe/C-56) GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 124 DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 DNI P+R DKP +P++DV+ I G GTV GR+E GV+K G V T E V VEM + L E G+NVG ++ + D++RG V Sbjct: 198 DNIPTPEREIDKPFLMPIEDVFSISGRGTVVTGRIERGVVKVGDKVQIVGLRDTRESIVTGVEMFRKELPEGQAGENVGLLLRGIGKNDVERGMV 292
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_CHLAB (Elongation factor Tu OS=Chlamydophila abortus GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 124 DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 DNI P+R DKP +P++DV+ I G GTV GR+E GV+K G V T E V VEM + L E G+NVG ++ + D++RG V Sbjct: 198 DNIPTPEREVDKPFLMPIEDVFSISGRGTVVTGRIERGVVKVGDKVQIVGLRDTRETIVTGVEMFRKELPEGQAGENVGLLLRGIGKNDVERGMV 292
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_BACTN (Elongation factor Tu OS=Bacteroides thetaiotaomicron GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 52/165 (31.52%), Postives = 83/165 (50.30%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+DA+DN I P R DKP +P++DV+ I G GTV GR+E+G++ G V GL + KS VEM + L + GDNVG ++ V ++KRG V K + + F ++V I+ + G + P + + ++ + +I G E+ Sbjct: 192 LMDAVDNWIPLPPRDVDKPFLMPVEDVFSITGRGTVATGRIESGIIHVGDEVEI--LGLGEDKKSVVTGVEMFRKLLDQGEAGDNVGLLLRGVDKNEIKRGMVL--CKPGQIKPHSRFKAEVYILKK--EEGGRHTPFHNKYRPQFYLRTMDCTGEITLPEGTEM 350
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_ANAVT (Elongation factor Tu OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 45/137 (32.85%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 19 EKVPFVPISGFEGDNMIERSTNLDWYKGP------TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 + +P V SG + +++ ++ + P L+DA+D+ I +P+R DKP + ++DV+ I G GTV GR+E G +K G VV T T V +EM ++L E + GDN G ++ + D++RG V Sbjct: 166 DDIPIVRGSGLQALDVMTKNPKTQRGENPWVDKIYELMDAVDSYIPDPERDIDKPFLMAVEDVFSITGRGTVATGRIERGKVKVGDVVELVGIRDTRNTTVTGIEMFKKSLDEGMAGDNAGVLLRGIQKTDIERGMV 302
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_ACIBL (Elongation factor Tu OS=Acidobacteria bacterium (strain Ellin345) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 48/131 (36.64%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 46 GFEGDNM-IERSTNLDWYKGPT--------LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 GF GD++ + R + L G L++A+D NI P R DKP +P++D++ I G GTV GR+E G +K G V T T V VEM + L E L GDN G ++ + D++RG V Sbjct: 163 GFPGDDLPVVRGSALGALNGEAQWEAKIDELMEAVDKNIPLPARDIDKPFLMPIEDIFSISGRGTVVTGRIERGKVKVGEEVEIVGFRETRKTVVTGVEMFKKQLDEGLAGDNAGLLLRGIGKDDVERGMV 293 The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bpback to top |