FC930905

Overview
NameFC930905
Unique NameFC930905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU2_ORITB (Elongation factor Tu 2 OS=Orientia tsutsugamushi (strain Boryong) GN=tuf2 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 50/165 (30.30%), Postives = 87/165 (52.73%), Query Frame = 1
Query:  109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588
            L+D++D+ I +P R  D+P  +P++DV+ I G GTV  GR+E GV+K G  V     GL +  K+    VEM  + L +   GDNVG  ++ +  +D++RG V   +K        +F ++V ++    + G  + P    +      + +++  +I   SGKE+
Sbjct:  192 LMDSIDDYIPQPTRVLDQPFLMPIEDVFSILGRGTVVTGRIERGVIKVGDEVEI--VGLRSTQKTICTGVEMFKKELDQGQAGDNVGILLRGIKREDVERGQVL--AKPGTITPHCSFEAEVYVLTK--EEGGRHTPFFQNYRPQFYCRTTDVTGEIALLSGKEM 350          
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU2_DESPS (Elongation factor Tu 2 OS=Desulfotalea psychrophila GN=tuf2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402
            L++A+D+ I EP+R  D+P  +P++DV+ I G GTV  GRVE G++K G  + +      + T    VEM  + L E   GDN+G  ++ V  +D++RG V
Sbjct:  194 LMEAIDSYIPEPERDVDQPFLMPVEDVFSISGRGTVATGRVERGIIKVGEEVAIVGVKDTVKTTCTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQV 294          
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU2_BARQU (Elongation factor Tu 2 OS=Bartonella quintana GN=tuf2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 1
Query:  109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402
            L+  +DN I  P+RP D+P  LP++DV+ I G GTV  GRVE GV+K G    ++   P+  TT V  VEM  + L +   GDN+G  ++ V  + ++RG V
Sbjct:  189 LMSEVDNYIPTPERPIDQPFLLPIEDVFSISGRGTVVTGRVERGVIKVGEEIEIIGIRPTSKTT-VTGVEMFRKLLDQGQAGDNIGALLRGVDREGIERGQV 289          
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU1_PHOPR (Elongation factor Tu 1 OS=Photobacterium profundum GN=tuf1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 50/163 (30.67%), Postives = 80/163 (49.08%), Query Frame = 1
Query:  109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588
            L +ALDN I EP+R  D P  LP++DV+ I G GTV  GRVE G+++ G  + +       TT    VEM  + L E   G+NVG  ++     D++RG V   +K         FTS++ +++     G  + P    +      + +++   I+   G E+
Sbjct:  192 LAEALDNYIPEPERAIDLPFILPIEDVFSIQGRGTVVTGRVEQGIVRVGEEVAIIGIKETTTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVL--AKPGSITPHTTFTSEIYVLSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350          
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU1_BARQU (Elongation factor Tu 1 OS=Bartonella quintana GN=tuf1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 1
Query:  109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402
            L+  +DN I  P+RP D+P  LP++DV+ I G GTV  GRVE GV+K G    ++   P+  TT V  VEM  + L +   GDN+G  ++ V  + ++RG V
Sbjct:  189 LMSEVDNYIPTPERPVDQPFLLPIEDVFSISGRGTVVTGRVERGVIKVGEEIEIIGIRPTSKTT-VTGVEMFRKLLDQGQAGDNIGALLRGVDREGIERGQV 289          
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: CYSN_YERPS (Sulfate adenylyltransferase subunit 1 OS=Yersinia pseudotuberculosis GN=cysN PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 56/215 (26.05%), Postives = 103/215 (47.91%), Query Frame = 1
Query:   25 VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM-NHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVE 666
            + FVP+S  +GDN+   S  +DWY GPTLL+ L++++       +PLR P+Q V +         G +  GV+  G  V   PSG+ + V  +      L EA PG+ +   + +    D+ RG +  ++  +  + A N    V+ M   P  +G  Y   +    +   V+  +   +I+  + + +E  P    NG  G+V++   +P++++
Sbjct:  203 IKFVPLSALDGDNVASPSEKMDWYSGPTLLEILESVDVVNARRQQPLRFPVQYVNRPNLDFRGYAGTLSAGVVWVGQKVKVLPSGVESTVARIVTFDGDLTEANPGEAITLVLADEV--DISRGDLLVDA-SETLKAARNALVDVVWMAEQPLVVGQSYDIKVAGKKTRARVENIQYQVEINSLTQRVVENLP---LNG-IGLVELAFDEPLLLD 410          
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: CYSN_YERPE (Sulfate adenylyltransferase subunit 1 OS=Yersinia pestis GN=cysN PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 56/215 (26.05%), Postives = 103/215 (47.91%), Query Frame = 1
Query:   25 VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM-NHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVE 666
            + FVP+S  +GDN+   S  +DWY GPTLL+ L++++       +PLR P+Q V +         G +  GV+  G  V   PSG+ + V  +      L EA PG+ +   + +    D+ RG +  ++  +  + A N    V+ M   P  +G  Y   +    +   V+  +   +I+  + + +E  P    NG  G+V++   +P++++
Sbjct:  203 IKFVPLSALDGDNVASPSEKMDWYSGPTLLEILESVDVVNARRQQPLRFPVQYVNRPNLDFRGYAGTLSAGVVWVGQKVKVLPSGVESTVARIVTFDGDLTEANPGEAITLVLADEV--DISRGDLLVDA-SETLKAARNALVDVVWMAEQPLVVGQSYDIKVAGKKTRARVENIQYQVEINSLTQRVVENLP---LNG-IGLVELAFDEPLLLD 410          
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: CYSN_YERP3 (Sulfate adenylyltransferase subunit 1 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=cysN PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 56/215 (26.05%), Postives = 103/215 (47.91%), Query Frame = 1
Query:   25 VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM-NHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVE 666
            + FVP+S  +GDN+   S  +DWY GPTLL+ L++++       +PLR P+Q V +         G +  GV+  G  V   PSG+ + V  +      L EA PG+ +   + +    D+ RG +  ++  +  + A N    V+ M   P  +G  Y   +    +   V+  +   +I+  + + +E  P    NG  G+V++   +P++++
Sbjct:  203 IKFVPLSALDGDNVASPSEKMDWYSGPTLLEILESVDVVNARRQQPLRFPVQYVNRPNLDFRGYAGTLSAGVVWVGQKVKVLPSGVESTVARIVTFDGDLTEANPGEAITLVLADEV--DISRGDLLVDA-SETLKAARNALVDVVWMAEQPLVVGQSYDIKVAGKKTRARVENIQYQVEINSLTQRVVENLP---LNG-IGLVELAFDEPLLLD 410          
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: CYSN_SALTI (Sulfate adenylyltransferase subunit 1 OS=Salmonella typhi GN=cysN PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 57/216 (26.39%), Postives = 101/216 (46.76%), Query Frame = 1
Query:   25 VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG--FVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVE 666
            + FVP+S  EGDN+  +S N+ WY GPTLL+ L+ ++  +    +P+R P+Q V +         G + +G +K G  +   PSG+ + V  +       +E   G+ +   + +    D+ RG   +A+N    PAR AA     V +   P   G  Y   L    +   ++       I+  + +++E  P    NG  G+V+M   +P+ ++
Sbjct:  200 IRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNPDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEVCAGEAITLVLNDDI--DISRGDLLLAANETLAPARHAA--IDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAICYQIDINNLTQRDVESLP---LNG-IGLVEMTFDEPLALD 407          
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_XYLFT (Elongation factor Tu OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=tufA PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12
Identity = 48/164 (29.27%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  109 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588
            L +ALD +I  P+R  D+P  +P++DV+ I G GTV  GR+E GV+K G    +V   P+  T  V  VEM  + L +   GDN G  ++     +++RG V   +K    +    F ++V +++   + G  + P  + +T    ++ +++  K+    G E+
Sbjct:  194 LAEALDTHIPNPERAIDRPFLMPVEDVFSISGRGTVVTGRIECGVIKVGDEVEIVGIRPTSKTI-VTGVEMFRKLLDQGQAGDNAGLLLRGTKRDEVERGQVL--AKPGCIKAHKEFEAEVYVLSK--EEGGRHTPFFNGYTPQFYMRTTDITGKVCLPEGVEM 352          
The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU2_ORITB5.362e-1230.30Elongation factor Tu 2 OS=Orientia tsutsugamushi (... [more]
EFTU2_DESPS5.362e-1238.61Elongation factor Tu 2 OS=Desulfotalea psychrophil... [more]
EFTU2_BARQU5.362e-1241.18Elongation factor Tu 2 OS=Bartonella quintana GN=t... [more]
EFTU1_PHOPR5.362e-1230.67Elongation factor Tu 1 OS=Photobacterium profundum... [more]
EFTU1_BARQU5.362e-1241.18Elongation factor Tu 1 OS=Bartonella quintana GN=t... [more]
CYSN_YERPS5.362e-1226.05Sulfate adenylyltransferase subunit 1 OS=Yersinia ... [more]
CYSN_YERPE5.362e-1226.05Sulfate adenylyltransferase subunit 1 OS=Yersinia ... [more]
CYSN_YERP35.362e-1226.05Sulfate adenylyltransferase subunit 1 OS=Yersinia ... [more]
CYSN_SALTI5.362e-1226.39Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
EFTU_XYLFT7.003e-1229.27Elongation factor Tu OS=Xylella fastidiosa (strain... [more]

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Properties
Property NameValue
Genbank descriptionC34110C09EF PostHarvP1 Citrus clementina cDNA clone C34110C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bp
CGGGGTTGGATCAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTT
CGAGGGTGACAACATGATTGAGAGGTCTACAAACCTTGACTGGTACAAGG
GTCCAACCCTGCTGGACGCTCTTGACAATATCAATGAGCCGAAGAGGCCC
TCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGTGG
CATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCCTG
GTATGGTGGTGACATTTGGCCCCTCTGGATTGACAACTGAGGTTAAGTCT
GTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCTTCCGGGTGACAATGT
TGGCTTCAACGTGAAGAACGTTGCTGTCAAGGATCTCAAGCGTGGTTTTG
TTGCTTCCAACTCGAAGGATGATCCGGCCAGGGAAGCTGCCAACTTCACC
TCACAGGTCATCATCATGAACCACCCTGGCCAGATTGGAAATGGATATGC
CCCAGTGCTTGACTGCCACACCTCCCACATTGCCGTCAAGTTTTCTGAGC
TCGTGACGAAGATTGATAGGCGATCAGGCAAGGAGCTTGAGAAGGAGCCC
AAGTTCTTGAAGAATGGAGACGCCGGAATGGTTAAGATGATTCCCCACCA
GCCCATGGTTGTTGAGACCTT
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