FC930908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930908 vs. ExPASy Swiss-Prot
Match: EFTU_RICMO (Elongation factor Tu OS=Rickettsia montana GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 62/192 (32.29%), Postives = 93/192 (48.44%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 656 + K H+NI IGHVD GK++ T + + K GG ++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ +++P + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DSDLLELVEMEVRELLSKYGFPGDEIPII 171
BLAST of FC930908 vs. ExPASy Swiss-Prot
Match: EFTU_RAT (Elongation factor Tu, mitochondrial OS=Rattus norvegicus GN=Tufm PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 64/190 (33.68%), Postives = 93/190 (48.95%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 656 ++K H+N+ IGHVD GK+T T + K AE FK +D ER RGITI+ A ++ T + D PGH D++KNMITGT+ D +L++ + G QTREH LLA +GV+ ++ NK DA + E+V+ E+ L + GY E+ P + Sbjct: 53 RDKPHVNVGTIGHVDHGKTTLTAAIT---------------KILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLAKQIGVEHVVVYVNKADAV----QDSEMVELVELEIRELLTEFGYKGEETPVI 216
BLAST of FC930908 vs. ExPASy Swiss-Prot
Match: EFTU_MOUSE (Elongation factor Tu, mitochondrial OS=Mus musculus GN=Tufm PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 64/190 (33.68%), Postives = 93/190 (48.95%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 656 ++K H+N+ IGHVD GK+T T + K AE FK +D ER RGITI+ A ++ T + D PGH D++KNMITGT+ D +L++ + G QTREH LLA +GV+ ++ NK DA + E+V+ E+ L + GY E+ P + Sbjct: 53 RDKPHVNVGTIGHVDHGKTTLTAAIT---------------KILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLAKQIGVEHVVVYVNKADAV----QDSEMVELVELEIRELLTEFGYKGEETPVI 216
BLAST of FC930908 vs. ExPASy Swiss-Prot
Match: EFTU_LACJO (Elongation factor Tu OS=Lactobacillus johnsonii GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 65/189 (34.39%), Postives = 93/189 (49.21%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 656 + K H+NI IGHVD GK+T T + L E + + +D E+ERGITI+ A ++ET + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK+D D + EV L + Y + VP + Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQ---------------IDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVQYIVVFLNKVDLVD---DPELIDLVEMEVRDLLSEYDYPGDDVPVI 172
BLAST of FC930908 vs. ExPASy Swiss-Prot
Match: EFTU_LACAC (Elongation factor Tu OS=Lactobacillus acidophilus GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 68/189 (35.98%), Postives = 93/189 (49.21%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 656 + K H+NI IGHVD GK+T T + L EK A+ S +D E+ERGITI+ A ++ET + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P V Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLA----------EKGLAKAEDYS-----QIDAAPEEKERGITINTAHVEYETENRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNYIVVFLNKCDLVD---DPELIDLVEMEVRDLLTEYDYPGDDIPVV 172
BLAST of FC930908 vs. ExPASy Swiss-Prot
Match: EFTU_KOSOT (Elongation factor Tu OS=Kosmotoga olearia (strain TBF 19.5.1) GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 64/189 (33.86%), Postives = 93/189 (49.21%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 656 + K H+NI IGH+D GK+T T + K A F +DK E+ RGITI++ ++ET K + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V M+ NK+D + + + +EV L K + ++VP + Sbjct: 8 RTKPHLNIGTIGHIDHGKTTLTAAIT---------------KALAYKGFADFTPFDAIDKAPEEKARGITINVTHVEYETEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGVMP-------QTREHVLLARQVNVPAMVVFINKVDMVD---DEELVELVEEEVRDLLSKYEFPGDEVPVI 171
BLAST of FC930908 vs. ExPASy Swiss-Prot
Match: EFTU_HUMAN (Elongation factor Tu, mitochondrial OS=Homo sapiens GN=TUFM PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 64/190 (33.68%), Postives = 93/190 (48.95%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 656 ++K H+N+ IGHVD GK+T T + K AE FK +D ER RGITI+ A ++ T + D PGH D++KNMITGT+ D +L++ + G QTREH LLA +GV+ ++ NK DA + E+V+ E+ L + GY E+ P + Sbjct: 53 RDKPHVNVGTIGHVDHGKTTLTAAIT---------------KILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLARQIGVEHVVVYVNKADAV----QDSEMVELVELEIRELLTEFGYKGEETPVI 216
BLAST of FC930908 vs. ExPASy Swiss-Prot
Match: EFTU_EUBE2 (Elongation factor Tu OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 66/189 (34.92%), Postives = 92/189 (48.68%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 656 + K H NI IGHVD GK+T T I K + ER A + +DK ERERGITI A ++ET K + +D PGH D++KNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK D D ++E+ L + G+ + P + Sbjct: 8 RTKPHCNIGTIGHVDHGKTTLTA-------AITKTLHERLGTGEAVAFEN-------IDKAPEERERGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVAATDGVM-------AQTREHILLARQVGVPYIVVFMNKCDMVDDPELLELVDMEIREL---LNEYGFPGDDTPII 172
BLAST of FC930908 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPD (Elongation factor Tu OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 64/189 (33.86%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 656 ++K H+NI IGHVD GK+T T + L + +R F +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P + Sbjct: 8 RDKPHVNIGTIGHVDHGKTTLTAAITSVLA------------KQGLAQQRDFGS---IDKAPEERERGITISTAHVEYQTKKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVYLNKVDIADPEL----IELVELELRELLTEYNFPGDDIPII 170
BLAST of FC930908 vs. ExPASy Swiss-Prot
Match: EFTU_CHLL2 (Elongation factor Tu OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 65/189 (34.39%), Postives = 96/189 (50.79%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 656 ++K H+NI IGHVD GK+T T + L K+ + +R F +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P + Sbjct: 8 RDKPHVNIGTIGHVDHGKTTLTAAITSVLA-----------KQGLAL-QRDFGS---IDKAPEERERGITISTAHVEYQTKKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPEL----LELVELELRELLTEYNFPGDDIPII 170 The following BLAST results are available for this feature:
BLAST of FC930908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930908 ID=FC930908; Name=FC930908; organism=Citrus clementina; type=EST; length=669bpback to top |