FC930910

Overview
NameFC930910
Unique NameFC930910
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930910 vs. ExPASy Swiss-Prot
Match: EIF3L_CULQU (Eukaryotic translation initiation factor 3 subunit L OS=Culex quinquefasciatus GN=CPIJ009242 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.052e-42
Identity = 83/184 (45.11%), Postives = 127/184 (69.02%), Query Frame = 2
Query:  110 DLGYDPNFVP--DSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSWDNYCSLFQVVLHG--VVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEI-ALLRQYDQAWNVYGVLNFLQALVEKSMI 640
            D GYD +F P  + VK F+V+    I+   VYEI  +YE +F  LS++ F+   WPS D VAH VDND++F +LY+E+++RHL+AR+   P+L+QR++S+ NYC+ F  +L     V ++LP+ WLW+++DEFVYQFQ+F QYRA++ +K+++E+  LL    + WN+  +LN L +LV  S I
Sbjct:   22 DDGYDRSFYPMHEDVKKFLVYFCSVIKGGVVYEIQNLYENTFPKLSEQHFEKKAWPSEDEVAHLVDNDNLFMILYKELYYRHLHARIQGGPSLEQRLNSFYNYCNFFNYILPSKEPVQLELPDIWLWELIDEFVYQFQNFAQYRARLTDKSDEEMDMLLNNNSKVWNILCILNVLHSLVSMSKI 205          
BLAST of FC930910 vs. ExPASy Swiss-Prot
Match: EIF3L_DROYA (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila yakuba GN=GE20146 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.374e-41
Identity = 85/206 (41.26%), Postives = 132/206 (64.08%), Query Frame = 2
Query:   50 DYEDAPADYDGSADARASSQDLGYDPNF----VPDSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLS--PTLKQRIDSWDNYCSLFQVVL--HGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEI-ALLRQYDQAWNVYGVLNFLQALVEKSMI 640
            +Y +    YD  A       D+ Y+ N+    +PD+VK F+++  + I+E N+Y+I  MYE +F  +SD  F  T WP    VA  VDND VF +LY+E+++RH++AR+S  P L+QRI+S+ NYC  F +++     V ++LP+ WLW++VDEFVYQFQ+F QYRA++ +K++ EI  L   +   W++  +LN L +LV+ S I
Sbjct:    6 EYANNSEYYDDYAHTGDPQLDMEYERNYYAARMPDNVKYFLINFCQAIKEGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLILYKELYYRHIHARISGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLTDKSQDEIQQLCVNHSNEWSILCILNVLHSLVDISNI 211          
BLAST of FC930910 vs. ExPASy Swiss-Prot
Match: EIF3L_DROER (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila erecta GN=GG13851 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.374e-41
Identity = 85/206 (41.26%), Postives = 132/206 (64.08%), Query Frame = 2
Query:   50 DYEDAPADYDGSADARASSQDLGYDPNF----VPDSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLS--PTLKQRIDSWDNYCSLFQVVL--HGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEI-ALLRQYDQAWNVYGVLNFLQALVEKSMI 640
            +Y +    YD  A       D+ Y+ N+    +PD+VK F+++  + I+E N+Y+I  MYE +F  +SD  F  T WP    VA  VDND VF +LY+E+++RH++AR+S  P L+QRI+S+ NYC  F +++     V ++LP+ WLW++VDEFVYQFQ+F QYRA++ +K++ EI  L   +   W++  +LN L +LV+ S I
Sbjct:    6 EYANNSEYYDDYAHTGDPQLDMEYERNYYAARMPDNVKYFLINFCQAIKEGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLILYKELYYRHIHARISGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLTDKSQDEIQQLCVNHSNEWSILCILNVLHSLVDISNI 211          
BLAST of FC930910 vs. ExPASy Swiss-Prot
Match: EIF3L_AEDAE (Eukaryotic translation initiation factor 3 subunit L OS=Aedes aegypti GN=AAEL009617 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.060e-41
Identity = 82/184 (44.57%), Postives = 126/184 (68.48%), Query Frame = 2
Query:  110 DLGYDPNFVP--DSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSWDNYCSLFQVVLHG--VVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEI-ALLRQYDQAWNVYGVLNFLQALVEKSMI 640
            D GYD ++ P  + VK F+V+    I+   VYEI  +YE +F  LS++ F+   WPS + VAH VDND +F +LY+E+++RHL+AR+   P+L+QR++S+ NYC+ F  +L     V ++LP+ WLW+++DEFVYQFQ+F QYRA++ +K+E+E+  LL    + WN+  +LN L +LV  S I
Sbjct:   23 DDGYDRSYYPMHEDVKKFLVYFSSVIKNGVVYEIQNLYENTFPKLSEQHFEKKAWPSEEEVAHLVDNDSLFMILYKELYYRHLHARIQKGPSLEQRLNSFYNYCNFFNHILPSKEPVQLELPDIWLWELIDEFVYQFQNFAQYRARLSDKSEEEMDMLLNNNSKVWNILCILNVLHSLVSMSKI 206          
BLAST of FC930910 vs. ExPASy Swiss-Prot
Match: EIF3L_DROME (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila melanogaster GN=CG5642 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.817e-41
Identity = 87/210 (41.43%), Postives = 134/210 (63.81%), Query Frame = 2
Query:   38 AASYDYEDAPADYDGSADARASSQDLGYDPNF----VPDSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSWDNYCSLFQVVL--HGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEI-ALLRQYDQAWNVYGVLNFLQALVEKSMI 640
            A + DY D   DY  + D +    D+ Y+ N+    +PD+VK F+++  + I+E N+Y+I  MYE +F  +SD  F  T WP    VA  VDND VF +LY+E+++RH++AR+   P L+QRI+S+ NYC  F +++     V ++LP+ WLW++VDEFVYQFQ+F QYRA++  K++ EI  L   +   W++  +LN L +LV+ S I
Sbjct:    8 ATNSDYYD---DYAHTGDPQL---DMEYERNYYAARMPDNVKYFLINFCQAIKEGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLILYKELYYRHIHARIPGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLTEKSQDEIQQLCVNHSNEWSILCILNVLHSLVDISNI 211          
BLAST of FC930910 vs. ExPASy Swiss-Prot
Match: EIF3L_ANOGA (Eukaryotic translation initiation factor 3 subunit L OS=Anopheles gambiae GN=AGAP006130 PE=3 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 6.817e-41
Identity = 82/196 (41.84%), Postives = 129/196 (65.82%), Query Frame = 2
Query:   74 YDGSADARASSQDLGYDPNFVP--DSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSWDNYCSLFQVVLHG--VVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEI-ALLRQYDQAWNVYGVLNFLQALVEKSMI 640
            YD         +D  YD  + P  + VK F+++    I++  VYEI  +YE +F  LS++ F+   WPS + VAH VDND++F +LY+E+++RHL+AR+   P+L+QR++S+ NYC+ F  +L     V ++LP+ WLW+++DEFVYQFQ+F QYRA++ +KT++E+  LL    + WN+  +LN L +LV  S I
Sbjct:   12 YDEYGYEMGMPEDGMYDRGYFPMHEDVKKFLMYFCTVIKDGVVYEIQNLYENTFPKLSEQHFEKKAWPSEEEVAHLVDNDNLFLILYKELYYRHLHARIQGGPSLEQRLNSFYNYCNFFNYILPSKEPVQLELPDIWLWELIDEFVYQFQNFAQYRARLTDKTDEEMDMLLNNNSKVWNILCILNVLHSLVSMSKI 207          
BLAST of FC930910 vs. ExPASy Swiss-Prot
Match: EIF3L_DROSI (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila simulans GN=GD12745 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.903e-41
Identity = 83/198 (41.92%), Postives = 127/198 (64.14%), Query Frame = 2
Query:   74 YDGSADARASSQDLGYDPNF----VPDSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSWDNYCSLFQVVL--HGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEI-ALLRQYDQAWNVYGVLNFLQALVEKSMI 640
            YD  A       D+ Y+ N+    +PD+VK F+++  + I+E N+Y+I  MYE +F  +SD  F  T WP    VA  VDND VF +LY+E+++RH++AR+   P L+QRI+S+ NYC  F +++     V ++LP+ WLW++VDEFVYQFQ+F QYRA++  K++ EI  L   +   W++  +LN L +LV+ S I
Sbjct:   14 YDDYAHTGDPQLDMEYERNYYAARMPDNVKYFLINFCQAIKEGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLILYKELYYRHIHARIPGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLTEKSQDEIQQLCVNHSNEWSILCILNVLHSLVDISNI 211          
BLAST of FC930910 vs. ExPASy Swiss-Prot
Match: EIF3L_DROSE (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila sechellia GN=GM24677 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.903e-41
Identity = 83/198 (41.92%), Postives = 127/198 (64.14%), Query Frame = 2
Query:   74 YDGSADARASSQDLGYDPNF----VPDSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSWDNYCSLFQVVL--HGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEI-ALLRQYDQAWNVYGVLNFLQALVEKSMI 640
            YD  A       D+ Y+ N+    +PD+VK F+++  + I+E N+Y+I  MYE +F  +SD  F  T WP    VA  VDND VF +LY+E+++RH++AR+   P L+QRI+S+ NYC  F +++     V ++LP+ WLW++VDEFVYQFQ+F QYRA++  K++ EI  L   +   W++  +LN L +LV+ S I
Sbjct:   14 YDDYAHTGDPQLDMEYERNYYAARMPDNVKYFLINFCQAIKEGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLILYKELYYRHIHARIPGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLTEKSQDEIQQLCVNHSNEWSILCILNVLHSLVDISNI 211          
BLAST of FC930910 vs. ExPASy Swiss-Prot
Match: EIF3L_DROVI (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila virilis GN=GJ13043 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.519e-40
Identity = 83/198 (41.92%), Postives = 128/198 (64.65%), Query Frame = 2
Query:   74 YDGSADARASSQDLGYDPNF----VPDSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSWDNYCSLFQVVL--HGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEI-ALLRQYDQAWNVYGVLNFLQALVEKSMI 640
            YD  A     + DL Y+ NF    +P++VK F+++  + I+E N+Y+I  MYE +F  +SD  F  T WP    V   VDND VF +LY+E+++RH++AR+   P L+QRI+S+ NYC  F +++     V ++LP+ WLW++VDEFVYQFQ+F QYRA++ +K++ EI  L   +   W++  +LN L +LV+ S I
Sbjct:   13 YDDYAHTGDPALDLEYERNFYANRMPENVKYFLMNFCQAIKEGNLYDIQNMYENTFPQISDHHFDKTAWPDEQEVGAIVDNDKVFLILYKELYYRHIHARIPGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLTDKSQDEIQQLCVNHSNVWSILCILNVLHSLVDISNI 210          
BLAST of FC930910 vs. ExPASy Swiss-Prot
Match: EIF3L_DROWI (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila willistoni GN=GK20774 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 82/198 (41.41%), Postives = 127/198 (64.14%), Query Frame = 2
Query:   74 YDGSADARASSQDLGYDPNF----VPDSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSWDNYCSLFQVVL--HGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEI-ALLRQYDQAWNVYGVLNFLQALVEKSMI 640
            YD  A       DL Y+ ++    +PD+VK F+++  + I++ N+Y+I  MYE +F  +SD  F  T WP    VA  VDN+ VF +LY+E++FRH++AR+   P L QRI+S+ NYC  F +++     V ++LP+ WLW++VDEFVYQFQ+F QYRA++ +K++ EI  L   +   W++  +LN L +LV+ S I
Sbjct:   14 YDDYAHTGDPQLDLEYERSYYTSRMPDNVKYFLMNFCQAIKDGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEVASIVDNEKVFLILYKELYFRHIHARIPGGPKLDQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLTDKSQDEIQQLCVNHSNVWSILCILNVLHSLVDISNI 211          
The following BLAST results are available for this feature:
BLAST of FC930910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
EIF3L_CULQU8.052e-4245.11Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROYA1.374e-4141.26Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROER1.374e-4141.26Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_AEDAE3.060e-4144.57Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROME6.817e-4141.43Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_ANOGA6.817e-4141.84Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROSI8.903e-4141.92Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROSE8.903e-4141.92Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROVI1.519e-4041.92Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROWI7.537e-4041.41Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionC34110D02EF PostHarvP1 Citrus clementina cDNA clone C34110D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930910 ID=FC930910; Name=FC930910; organism=Citrus clementina; type=EST; length=651bp
GAACGAATTAAACTCTGATCTATAAGCAATAATGGCGGCGGCTAGTTACG
ATTACGAAGACGCTCCGGCCGATTACGATGGTTCAGCGGATGCGCGCGCT
TCATCCCAAGACCTAGGCTACGACCCTAACTTCGTGCCTGACTCCGTAAA
GTCATTCGTTGTTCATCTTTACCGCCACATTCGCGAGAAGAATGTCTACG
AGATCCACCAGATGTACGAGACGTCGTTTCAGAGTCTCTCCGACCGCCTC
TTCAAGGATACTCCCTGGCCATCCGTTGACGCCGTCGCTCATTATGTTGA
CAATGATCATGTTTTCTGTCTTCTCTATCGCGAGATGTGGTTCCGCCACT
TGTACGCTAGATTGTCGCCTACTCTCAAGCAGAGGATTGATTCTTGGGAC
AATTATTGTAGCCTGTTTCAGGTGGTGCTGCATGGAGTGGTGAATATGCA
GTTGCCAAACCAGTGGTTGTGGGATATGGTGGATGAGTTTGTTTACCAGT
TCCAGAGTTTCTGTCAGTACAGAGCCAAGATGAAGAACAAGACAGAGCAG
GAGATTGCACTTTTGAGGCAGTATGATCAGGCTTGGAATGTTTATGGCGT
GCTCAATTTCTTGCAAGCACTCGTGGAGAAGTCGATGATCATTCAGATTT
T
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