FC930911

Overview
NameFC930911
Unique NameFC930911
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14394 contig Ccv1_Contig14394:297..1012. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.130e-45
Identity = 93/181 (51.38%), Postives = 116/181 (64.09%), Query Frame = 3
Query:   12 APASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            A  +   R W RT C+ D++GK +C TGDCGG+L C+ SGA  PATLAE+       QD+YDVSLVDG+N+P+ + P       CT+  C  D+NA CPSELKV  DGG     C SAC  F+  QYCC  A+   D C  + YS+IFK+ CP AYSYA DD ++TF C SG DY+I FCP
Sbjct:   62 AAGTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCTVSGAV-PATLAEYT---QSDQDYYDVSLVDGFNIPLAINPTNA---QCTAPACKADINAVCPSELKV--DGG-----CNSACNVFKTDQYCCRNAY--VDNCPATNYSKIFKNQCPQAYSYAKDD-TATFACASGTDYSIVFCP 225          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.566e-44
Identity = 86/184 (46.74%), Postives = 109/184 (59.24%), Query Frame = 3
Query:    6 LNAPASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLD-GYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            L  PA W GR+W R  CS DS G+ +C TGDCGG L C+G+  A PAT+ E  L        FYDVSLVDG+N P+ +   GG G  C +  C  D+N  CPS L+V    G     C+SAC A    +YCC G +++P  C+P+ +S +FK+ CP AYSYAYDD +S   C     Y ITFCP
Sbjct:   69 LEVPAGWSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGG-GVGCGTAACGADVNVCCPSALEVRDREGRVA-GCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC-HAKRYLITFCP 249          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 7.788e-44
Identity = 87/184 (47.28%), Postives = 119/184 (64.67%), Query Frame = 3
Query:    6 LNAPA-SWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            + APA +   R+WART C  D++G+ +C TGDCGG L+C+G G AP  TLAE+ L  +   DF+D+SL+DG+N+PM  +P GG G +     C VD+NA CP+EL+   DG      C +AC  F++ +YCC G  S  + C P+ YS+ FK  CP AYSY  DD +STFTC +G +Y + FCP
Sbjct:   55 ITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRAPN-TLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCS-RGPRCAVDVNARCPAELR--QDG-----VCNNACPVFKKDEYCCVG--SAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 227          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.960e-43
Identity = 91/193 (47.15%), Postives = 110/193 (56.99%), Query Frame = 3
Query:    6 LNAPASW---------GGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCT-STGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            LN   SW         G R+WART C+ D +G+  C TGDCGG L+C   GA PP TLAE+ L+G+   DF+D+SLVDG+N+PM   P       CT    C  D+N  CPSELK  T GG     C + C  F+  QYCCN       +C P+ YS+ FK  CP AYSY  DD  STFTC  G DY + FCP
Sbjct:   26 LNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYGA-PPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSN---GCTRGISCTADINGQCPSELK--TQGG-----CNNPCTVFKTDQYCCNSG-----SCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.918e-42
Identity = 84/184 (45.65%), Postives = 118/184 (64.13%), Query Frame = 3
Query:    6 LNAPA-SWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            + APA +   R+WART C  D++G+ +C TGDCGG ++C+G G AP  TLAE+ L  +   DF+D+S++DG+N+P   +P GG G +     C VD+NA CP+EL+   DG      C +AC  F++ +YCC G  S  + C P+ YS+ FK  CP AYSY  DD +STFTC +G +Y + FCP
Sbjct:   34 ITAPAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRAPN-TLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCS-RGPRCAVDVNARCPAELR--QDG-----VCNNACPVFKKDEYCCVG--SAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 6.171e-41
Identity = 84/186 (45.16%), Postives = 110/186 (59.14%), Query Frame = 3
Query:    6 LNAPASWG-GRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTC-GSGPDYTITFCPS 557
            +NAP      R+W RT C+ ++ G+ TC TGDCGG L+C+G G  PP TLAE+ LD + G DF+D+SLVDG+N+PM   P    G  C +  C  ++N  CP EL+V   GG     C + C  F   QYCC     T   C P+ +S+ FK  CP AYSY  DD +STFTC G   +Y + FCP+
Sbjct:   55 INAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRV--PGG-----CNNPCTTFGGQQYCC-----TQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFCPN 227          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.823e-40
Identity = 86/192 (44.79%), Postives = 109/192 (56.77%), Query Frame = 3
Query:    6 LNAPASWG-GRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSG-PDYTITFCP----SPN 563
            +NAP      R+W RT C+ D  G+ +C TGDCGG L+C+G G  PP TLAE+ LD +   DF+D+SLVDG+N+PM   P    G  C +  C  ++N  CP  L+V   GG     C + C  F   QYCC     T   C P+  S+ FK  CP AYSY  DD +STFTC SG  +Y + FCP    SPN
Sbjct:   55 INAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRV--PGG-----CNNPCTTFGGQQYCC-----TQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCPNGVTSPN 233          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.911e-40
Identity = 86/192 (44.79%), Postives = 109/192 (56.77%), Query Frame = 3
Query:    6 LNAPASWG-GRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSG-PDYTITFCP----SPN 563
            +NAP      R+W RT C+ D  G+ +C TGDCGG L+C+G G  PP TLAE+ LD +   DF+D+SLVDG+N+PM   P    G  C +  C  ++N  CP  L+V   GG     C + C  F   QYCC     T   C P+  S+ FK  CP AYSY  DD +STFTC SG  +Y + FCP    SPN
Sbjct:   47 INAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRV--PGG-----CNNPCTTFGGQQYCC-----TQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCPNGVTSPN 225          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.593e-39
Identity = 83/186 (44.62%), Postives = 107/186 (57.53%), Query Frame = 3
Query:    6 LNAPASWG-GRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTC-GSGPDYTITFCPS 557
            +NAP      R+W RT C+ ++ G+ TC TGDCGG L+C+G G  PP TLAE+ LD +   DF+D+SLVDG+N+PM   P    G  C +  C  ++N  CP  LKV   GG     C + C  F   QYCC     T   C P+  S+ FK  CP AYSY  DD +STFTC G   +Y + FCP+
Sbjct:   55 INAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKV--PGG-----CNNPCTTFGGQQYCC-----TQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCPN 227          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.195e-38
Identity = 82/186 (44.09%), Postives = 107/186 (57.53%), Query Frame = 3
Query:    6 LNAPASWG-GRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSG-PDYTITFCPS 557
            +NAP      R+W RT C+ ++ G+ +C TGDCGG L+C+G G  PP TLAE+ LD +   DF+D+SLVDG+N+PM   P       C +  C  ++N  CP  LKV   GG     C + C  F   QYCC     T   C P+  S+ FK  CP AYSY  DD +STFTC SG  +Y + FCP+
Sbjct:   55 INAPRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKV--PGG-----CNNPCTTFGGQQYCC-----TQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCPN 227          
The following BLAST results are available for this feature:
BLAST of FC930911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
PRR3_JUNAS4.130e-4551.38Pathogenesis-related protein OS=Juniperus ashei PE... [more]
TLPH_ORYSJ4.566e-4446.74Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
ZEAM_MAIZE7.788e-4447.28Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
P21_SOYBN2.960e-4347.15Protein P21 OS=Glycine max PE=1 SV=1[more]
IAAT_MAIZE1.918e-4245.65Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
OSMO_TOBAC6.171e-4145.16Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
OS13_SOLCO6.823e-4044.79Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
TPM1_SOLLC8.911e-4044.79Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
NP24_SOLLC2.593e-3944.62Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
OS81_SOLCO2.195e-3844.09Osmotin-like protein OSML81 OS=Solanum commersonii... [more]

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Properties
Property NameValue
Genbank descriptionC34110D04EF PostHarvP1 Citrus clementina cDNA clone C34110D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930911 ID=FC930911; Name=FC930911; organism=Citrus clementina; type=EST; length=716bp
AGACCCTCAACGCACCCGCTTCGTGGGGCGGCCGCATGTGGGCCAGAACA
CTCTGCTCCCAGGACTCCACCGGTAAGTTCACCTGCGTCACAGGTGATTG
CGGCGGCAAGCTGGAATGCTCCGGCAGTGGTGCTGCCCCGCCCGCCACTC
TTGCTGAGTTCAAGCTCGATGGCTATGGTGGCCAAGACTTCTATGATGTC
AGTTTGGTCGACGGCTACAACCTCCCCATGCTTGTCGTTCCTCAGGGTGG
TGACGGACCCAATTGTACAAGCACGGGATGCGTTGTCGACTTGAACGCCG
CGTGTCCTTCGGAGCTTAAGGTTATGACCGACGGTGGCAGCGGAGGTGTT
GCTTGCAAGAGCGCGTGCGAAGCCTTTAGGCAGCCGCAGTACTGTTGTAA
TGGCGCGTTTAGTACTCCCGATACATGCAAGCCATCTACTTATTCTCAGA
TCTTCAAAAGCGCGTGTCCTCACGCTTACAGCTATGCGTACGATGACAAA
TCCAGCACCTTTACATGCGGTTCGGGGCCCGACTACACCATAACCTTCTG
TCCTTCCCCCAACACCAGCCAGAAATCCTCACAAGGTGGAAACAGTGGAA
GCAATGCGCCCAACACAGGGACCATCGATAGCACAATGGTGTACGAAGGT
GCGTTGGAACCAAGCAGCGCGTCACCTTCACGTATACTACGTGCTGGGAT
CGCATGGCAATGGCAT
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