FC930911

Overview
NameFC930911
Unique NameFC930911
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14394 contig Ccv1_Contig14394:297..1012. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.423e-37
Identity = 80/180 (44.44%), Postives = 102/180 (56.67%), Query Frame = 3
Query:   15 PASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            P +   R+W RT C+ D +G+  C TGDC G LEC G G AP  TLAEF L+    QDF D+SLVDG+N+PM   P  G    C +  C   +N  CP++LK  T GG     C + C   +  +YCC      P +C P+  S+ FK  CP AYSY  DD +S FTC SG +Y + FCP
Sbjct:   62 PGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKAPN-TLAEFALN-QPNQDFVDISLVDGFNIPMEFSPTNG---GCRNLRCTAPINEQCPAQLK--TQGG-----CNNPCTVIKTNEYCCTNG---PGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFCP 226          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.406e-37
Identity = 80/185 (43.24%), Postives = 102/185 (55.14%), Query Frame = 3
Query:   15 PASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGS-GPDYTITFCPSPNT 566
            P +   R+W RT C+ D  G+  C TGDCGG LEC G G  PP TLAE+ L+ +   DF+D+S++DG+N+PM   P       C    CV ++N  CP  L+V   GG     C + C  F   QYCC     T   C P+  S+ FK  CP AYSY  DD +STFTC S   DY + FCP  +T
Sbjct:   60 PGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGK-PPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRV--PGG-----CNNPCTTFGGQQYCC-----TQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWTTDYKVMFCPYGST 231          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.061e-37
Identity = 77/177 (43.50%), Postives = 101/177 (57.06%), Query Frame = 3
Query:   27 GGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCT-STGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            G R+W RT C+ D  G+  C TGDC G L+C   G  PP TLAE+ L+ +   DF+D+SLVDG+N+ M   P  G    CT    C  D+N  CP+EL+       GG  C + C  F+  QYCCN        C  + +S+ FK  CP AYSY  DD++STFTC +G +Y + FCP
Sbjct:   65 GARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQ-PPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSG---GCTRGIKCTADINGQCPNELRA-----PGG--CNNPCTVFKTDQYCCNSG-----NCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.222e-37
Identity = 78/180 (43.33%), Postives = 101/180 (56.11%), Query Frame = 3
Query:   15 PASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            P +   R+W RT C+ D +G+  C TGDC G LEC G G  PP TLAEF L+    QDF D+SLVDG+N+PM   P  G    C +  C   +N  CP++LK  T GG     C + C   +  ++CC      P +C P+  S+ FK+ CP AYSY  DD  S FTC  G +Y + FCP
Sbjct:   62 PGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGK-PPNTLAEFALN-QPNQDFVDISLVDGFNIPMEFSPTNG---GCRNLRCTAPINEQCPAQLK--TQGG-----CNNPCTVIKTNEFCCTNG---PGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.204e-36
Identity = 77/174 (44.25%), Postives = 101/174 (58.05%), Query Frame = 3
Query:   33 RMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            R+W RT C+ DS+G+  C TGDC G L+C+G G  PP TLAE+ L+ +   DFYD+SLVDG+N+PM   P      NC    C  D+N  CP+ L+    GG     C + C  F+  QYCC        +C  + YS+ FK  CP AYSY  DD +STFTC +  +Y + FCP
Sbjct:   65 RIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWG-QPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSS---NCHRILCTADINGQCPNVLR--APGG-----CNNPCTVFQTNQYCCTNG---QGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTC-TNTNYRVVFCP 223          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.807e-36
Identity = 78/181 (43.09%), Postives = 99/181 (54.70%), Query Frame = 3
Query:   15 PASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGS-GPDYTITFCP 554
            P +   R+W RT C+ D  G+  C TGDCGG LEC G G  PP TLAE+ L+ +   DF+D+S++DG+N+PM   P       C    C  ++N  CP  L+V   GG     C + C  F   QYCC     T   C P+  S+ FK  CP AYSY  DD +STFTC S   DY + FCP
Sbjct:   60 PGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGK-PPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRV--PGG-----CNNPCTTFGGQQYCC-----TQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 227          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.284e-34
Identity = 77/186 (41.40%), Postives = 104/186 (55.91%), Query Frame = 3
Query:    3 TLNA-PASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCPS 557
            T+N  P + GG++WART C  D +G+  C TGDCGG L+C   G  PP TLAEF L+ Y G+D+ D+S + G+N+PM   P       C    C  D+   CP++LK      + G  C  AC  F+  +YCC     T   C P+ YS+ FK  CP A+SY   DK +T TC    +Y +TFCP+
Sbjct:   60 TINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFG-RPPTTLAEFSLNQY-GKDYIDISNIKGFNVPMDFSP---TTRGCRGVRCAADIVGQCPAKLK------APGGGCNDACTVFQTSEYCC-----TTGKCGPTEYSRFFKRLCPDAFSYVL-DKPTTVTCPGSSNYRVTFCPT 228          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34
Identity = 77/186 (41.40%), Postives = 102/186 (54.84%), Query Frame = 3
Query:    3 TLNA-PASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCPS 557
            T+N  P + GG++WART C  D +G   C TGDCGG L C   G  PP TLAEF L+ Y G+D+ D+S + G+N+PM   P       C    C  D+   CP++LK      + G  C  AC  F+  +YCC     T   C P+ YS+ FK  CP A+SY   DK +T TC    +Y +TFCP+
Sbjct:   38 TINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFG-RPPTTLAEFSLNQY-GKDYIDISNIKGFNVPMNFSP---TTRGCRGVRCAADIVGQCPAKLK------APGGGCNDACTVFQTSEYCC-----TTGKCGPTEYSRFFKRLCPDAFSYVL-DKPTTVTCPGSSNYRVTFCPT 206          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18
Identity = 48/94 (51.06%), Postives = 60/94 (63.83%), Query Frame = 3
Query:    3 TLNAPA-SWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGC 281
            ++N PA +  GR+WART CS +  G  +C TGDCGG+L CS SG  PPATLAEF + G   QDFYD+S++DG+NL M      GD   C    C
Sbjct:   53 SINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGR-PPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQCRDPSC 144          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18
Identity = 48/94 (51.06%), Postives = 60/94 (63.83%), Query Frame = 3
Query:    3 TLNAPA-SWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGC 281
            ++N PA +  GR+WART CS +  G  +C TGDCGG+L CS SG  PPATLAEF + G   QDFYD+S++DG+NL M      GD   C    C
Sbjct:   53 SINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGQ-PPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQCRDPSC 144          
The following BLAST results are available for this feature:
BLAST of FC930911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
PRR1_TOBAC1.423e-3744.44Pathogenesis-related protein R major form OS=Nicot... [more]
OS35_SOLCO5.406e-3743.24Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
TLP_ACTDE7.061e-3743.50Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
PRR2_TOBAC9.222e-3743.33Pathogenesis-related protein R minor form OS=Nicot... [more]
OSL3_ARATH1.204e-3644.25Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
OLPA_TOBAC7.807e-3643.09Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
THM2_THADA4.284e-3441.40Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA9.543e-3441.40Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PR1C_HORVU5.621e-1851.06Pathogenesis-related protein 1C OS=Hordeum vulgare... [more]
PR1A_HORVU5.621e-1851.06Pathogenesis-related protein 1A/1B OS=Hordeum vulg... [more]

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Properties
Property NameValue
Genbank descriptionC34110D04EF PostHarvP1 Citrus clementina cDNA clone C34110D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930911 ID=FC930911; Name=FC930911; organism=Citrus clementina; type=EST; length=716bp
AGACCCTCAACGCACCCGCTTCGTGGGGCGGCCGCATGTGGGCCAGAACA
CTCTGCTCCCAGGACTCCACCGGTAAGTTCACCTGCGTCACAGGTGATTG
CGGCGGCAAGCTGGAATGCTCCGGCAGTGGTGCTGCCCCGCCCGCCACTC
TTGCTGAGTTCAAGCTCGATGGCTATGGTGGCCAAGACTTCTATGATGTC
AGTTTGGTCGACGGCTACAACCTCCCCATGCTTGTCGTTCCTCAGGGTGG
TGACGGACCCAATTGTACAAGCACGGGATGCGTTGTCGACTTGAACGCCG
CGTGTCCTTCGGAGCTTAAGGTTATGACCGACGGTGGCAGCGGAGGTGTT
GCTTGCAAGAGCGCGTGCGAAGCCTTTAGGCAGCCGCAGTACTGTTGTAA
TGGCGCGTTTAGTACTCCCGATACATGCAAGCCATCTACTTATTCTCAGA
TCTTCAAAAGCGCGTGTCCTCACGCTTACAGCTATGCGTACGATGACAAA
TCCAGCACCTTTACATGCGGTTCGGGGCCCGACTACACCATAACCTTCTG
TCCTTCCCCCAACACCAGCCAGAAATCCTCACAAGGTGGAAACAGTGGAA
GCAATGCGCCCAACACAGGGACCATCGATAGCACAATGGTGTACGAAGGT
GCGTTGGAACCAAGCAGCGCGTCACCTTCACGTATACTACGTGCTGGGAT
CGCATGGCAATGGCAT
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