FC930922

Overview
NameFC930922
Unique NameFC930922
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15236 contig Ccv1_Contig15236:1..765. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930922 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 4.729e-33
Identity = 66/182 (36.26%), Postives = 85/182 (46.70%), Query Frame = 2
Query:   98 LATITFT---------NNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCT 616
            LA +T+T         NNC  T+W  A    GG +L E G      A      P     R W RT C+ D +G+  C T DCG G + C G G  PP +L E+ +      DF+D+S++DGFN+P+S  P       C    C AN+N  CP  L V G       C + C  F   QYCCT
Sbjct:   13 LAFVTYTYASGVFEVHNNCPYTVWAAATPVGGGRRL-ERGQSWWFWAP-----PGTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLECKGWGK-PPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG------GCNNPCTTFGGQQYCCT 180          

HSP 2 Score: 48.9062 bits (115), Expect = 4.729e-33
Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  640 CPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCT 735
            C PT+ S+ FK +CP AYSY  DD TSTF+CT
Sbjct:  184 CGPTELSRWFKQRCPDAYSYPQDDPTSTFTCT 215          
BLAST of FC930922 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.024e-33
Identity = 71/194 (36.60%), Postives = 90/194 (46.39%), Query Frame = 2
Query:   62 CLTFSFLISGAHLATITFTN---------NCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCT 616
            CL F FL     LA +T+TN         NC  T+W  A    GG +L E G      A      P     R W RT C+ D +G+  C T DCG G + C G G  PP +L E+ +      DF+D+S++DGFN+P+S  P       C    C AN+N  CP  L V G       C + C  F   QYCCT
Sbjct:    7 CLVF-FL-----LAFVTYTNASGVFEVHNNCPYTVWAAATPIGGGRRL-ERGQSWWFWAP-----PGTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLECKGWGK-PPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPG------GCNNPCTTFGGQQYCCT 180          

HSP 2 Score: 47.3654 bits (111), Expect = 8.024e-33
Identity = 19/31 (61.29%), Postives = 22/31 (70.97%), Query Frame = 1
Query:  640 CPPTKYSKIFKDQCPQAYSYAYDDRTSTFSC 732
            C PT  S+ FK +CP AYSY  DD TSTF+C
Sbjct:  184 CGPTDLSRFFKQRCPDAYSYPQDDPTSTFTC 214          
BLAST of FC930922 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.654e-32
Identity = 63/181 (34.81%), Postives = 90/181 (49.72%), Query Frame = 2
Query:   77 FLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDV-PSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCT 616
            + ++  H AT    N C  T+W  A +  GG QL+       S    +++V P   + R W RT C+ D SG+  C T DC +G + C G G  PP +L EF +     QDF D+SLVDGFN+P+  +P  G    C    C A +N  CP++L  +G       C + C      ++CCT
Sbjct:   18 YFVAVTHAATFDIVNQCTYTVWAAA-SPGGGRQLN-------SGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDC-NGMLECQGYGK-PPNTLAEFALN-QPNQDFVDISLVDGFNIPMEFSPTNGG---CRNLRCTAPINEQCPAQLKTQG------GCNNPCTVIKTNEFCCT 178          

HSP 2 Score: 46.9802 bits (110), Expect = 6.654e-32
Identity = 21/44 (47.73%), Postives = 25/44 (56.82%), Query Frame = 1
Query:  631 PETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGP*LRYTF 762
            P +C PT  S+ FK +CP AYSY  DD  S F+C  G   R  F
Sbjct:  181 PGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVF 224          
BLAST of FC930922 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 6.654e-32
Identity = 66/185 (35.68%), Postives = 89/185 (48.11%), Query Frame = 2
Query:   65 LTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKG-RFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTS-SCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCC 613
            L  +FL + A  AT    NNC  T+W  A+   GG +L      + +    T       KG R W RT C+ D +G+  C T DC +G + C   G  PP +L E+ +      DFFD+SLVDGFN+ +  +P  G    CT    C A++N  CP+EL   G       C + C  F   QYCC
Sbjct:   13 LFIAFLFTCARGATFNIINNCPFTVWAAAVPG-GGKRLDRGQNWIINPGAGT-------KGARVWPRTGCNFDGAGRGKCQTGDC-NGLLQCQAFGQ-PPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGG---CTRGIKCTADINGQCPNELRAPG------GCNNPCTVFKTDQYCC 178          

HSP 2 Score: 51.9878 bits (123), Expect = 6.654e-32
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 1
Query:  640 CPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGP*LRYTF 762
            C  T +SK FKD+CP AYSY  DD+TSTF+C  G   +  F
Sbjct:  183 CGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVF 223          
BLAST of FC930922 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.545e-30
Identity = 65/187 (34.76%), Postives = 92/187 (49.20%), Query Frame = 2
Query:   59 FCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDV-PSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCT 616
            F   F  L++ +  AT    N C  T+W  A  + G A L   G +L S    T++V P    G+ WART C  D SG+  C T DCG G + C   G  PP +L EF++    G+D+ D+S + GFN+P+  +P   +   C    C A++   CP++L   G       C  AC  F   +YCCT
Sbjct:    9 FLFPFLLLLTLSRAATFEIVNRCSYTVWAAA--SKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCG-GLLQCKRFG-RPPTTLAEFSL-NQYGKDYIDISNIKGFNVPMDFSP---TTRGCRGVRCAADIVGQCPAKLKAPGG-----GCNDACTVFQTSEYCCT 182          

HSP 2 Score: 41.9726 bits (97), Expect = 4.545e-30
Identity = 19/41 (46.34%), Postives = 25/41 (60.98%), Query Frame = 1
Query:  640 CPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGP*LRYTF 762
            C PT+YS+ FK  CP A+SY   D+ +T +C G    R TF
Sbjct:  186 CGPTEYSRFFKRLCPDAFSYVL-DKPTTVTCPGSSNYRVTF 225          
BLAST of FC930922 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.233e-29
Identity = 77/213 (36.15%), Postives = 106/213 (49.77%), Query Frame = 2
Query:   38 MMNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSEN-GFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFINLRLAHRLNILRFSK 673
            M  + AI  +  + L      A  T  N C  T+W  ++   GG QL+    + + + A  T         R WART C  D+SG+ +C T DCG G + C G G AP  +L E+ +      DFFD+SL+DGFN+P+S  P GGSG +     C  +VNA CP+EL   G       C +AC  F + +YCC G+  N    H  N  R+ K
Sbjct:    1 MAGSVAIVGIFVALLAVAGEAAVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTA-------ARIWARTGCKFDASGRGSCRTGDCG-GVLQCTGYGRAPN-TLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCS-RGPRCAVDVNARCPAELRQDG------VCNNACPVFKKDEYCCVGSAAN--DCHPTNYSRYFK 195          
BLAST of FC930922 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.363e-28
Identity = 73/192 (38.02%), Postives = 98/192 (51.04%), Query Frame = 2
Query:  101 ATITFTNNCQNTIWPGALTADGGAQLSEN-GFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFINLRLAHRLNILRFSK 673
            A  T  N C  T+W  ++   GG QL+    + + + A  T         R WART C  D+SG+ +C T DCG G V C G G AP  +L E+ +      DFFD+S++DGFN+P S  P GGSG +     C  +VNA CP+EL   G       C +AC  F + +YCC G+  N    H  N  R+ K
Sbjct:    1 AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTA-------ARIWARTGCQFDASGRGSCRTGDCG-GVVQCTGYGRAPN-TLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCS-RGPRCAVDVNARCPAELRQDG------VCNNACPVFKKDEYCCVGSAAN--NCHPTNYSRYFK 174          
BLAST of FC930922 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.409e-28
Identity = 62/173 (35.84%), Postives = 86/173 (49.71%), Query Frame = 2
Query:  101 ATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDV-PSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCT 616
            AT    N C  T+W  A  + G A L   G +L S    T++V P    G+ WART C  D SG   C T DCG G + C   G  PP +L EF++    G+D+ D+S + GFN+P++ +P   +   C    C A++   CP++L   G       C  AC  F   +YCCT
Sbjct:    1 ATFEIVNRCSYTVWAAA--SKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCG-GLLRCKRFG-RPPTTLAEFSL-NQYGKDYIDISNIKGFNVPMNFSP---TTRGCRGVRCAADIVGQCPAKLKAPGG-----GCNDACTVFQTSEYCCT 160          

HSP 2 Score: 41.9726 bits (97), Expect = 1.409e-28
Identity = 19/41 (46.34%), Postives = 25/41 (60.98%), Query Frame = 1
Query:  640 CPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGP*LRYTF 762
            C PT+YS+ FK  CP A+SY   D+ +T +C G    R TF
Sbjct:  164 CGPTEYSRFFKRLCPDAFSYVL-DKPTTVTCPGSSNYRVTF 203          
BLAST of FC930922 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.712e-26
Identity = 67/174 (38.51%), Postives = 94/174 (54.02%), Query Frame = 2
Query:   41 MNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWK-GRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGN 559
            M+T A+  L  +   +GA  AT    NNC +TIWP  +   GG       FEL S    +++VP+  + GR WART CS +  G  +C T DCG GQ++C+ +G  PPA+L EFTI     QDF+D+S++DGFNL +  +   G    C   SC        P+++A     GN
Sbjct:    1 MSTSAVLFLLLAVFAAGASAATFNIKNNCGSTIWPAGIPVGGG-------FELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCG-GQLSCSLSGR-PPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQCRDPSCPPPQAYQHPNDVATHACSGN 164          
BLAST of FC930922 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.712e-26
Identity = 67/174 (38.51%), Postives = 94/174 (54.02%), Query Frame = 2
Query:   41 MNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWK-GRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGN 559
            M+T A+  L  +   +GA  AT    NNC +TIWP  +   GG       FEL S    +++VP+  + GR WART CS +  G  +C T DCG GQ++C+ +G  PPA+L EFTI     QDF+D+S++DGFNL +  +   G    C   SC        P+++A     GN
Sbjct:    1 MSTSAVLFLLLAVFAAGASAATFNIKNNCGSTIWPAGIPVGGG-------FELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCG-GQLSCSLSGQ-PPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQCRDPSCPPPQAYQHPNDVATHACSGN 164          
The following BLAST results are available for this feature:
BLAST of FC930922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
OLPA_TOBAC4.729e-3336.26Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
OS35_SOLCO8.024e-3336.60Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
PRR2_TOBAC6.654e-3234.81Pathogenesis-related protein R minor form OS=Nicot... [more]
TLP_ACTDE6.654e-3235.68Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
THM2_THADA4.545e-3034.76Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
ZEAM_MAIZE1.233e-2936.15Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
IAAT_MAIZE1.363e-2838.02Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
THM1_THADA1.409e-2835.84Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PR1C_HORVU3.712e-2638.51Pathogenesis-related protein 1C OS=Hordeum vulgare... [more]
PR1A_HORVU3.712e-2638.51Pathogenesis-related protein 1A/1B OS=Hordeum vulg... [more]

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Properties
Property NameValue
Genbank descriptionC34110E03EF PostHarvP1 Citrus clementina cDNA clone C34110E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930922 ID=FC930922; Name=FC930922; organism=Citrus clementina; type=EST; length=764bp
GACAAATAAAAGTTAATCAAGCAAAGCCTCAGCTTTCATGATGAATACCC
GAGCAATATTTTGCCTTACCTTCTCCTTCCTCATCTCTGGGGCGCACTTG
GCAACGATTACGTTCACAAACAACTGCCAAAACACTATTTGGCCGGGAGC
CCTAACCGCAGATGGAGGTGCTCAGCTGTCAGAAAATGGGTTCGAGTTAG
CATCCAAAGCAAAAAAGACTCTCGATGTTCCTTCCCCTTGGAAAGGCCGT
TTCTGGGCTCGAACACAGTGCTCTAGAGATTCCTCCGGCAAGTTCACTTG
CGCCACTGCAGATTGTGGCTCAGGCCAAGTCACATGCAACGGTAATGGTG
CAGCCCCACCGGCATCTCTCGTGGAATTCACAATTGCTGCAGACAAAGGA
CAAGATTTCTTCGATCTTAGCCTCGTTGATGGCTTTAACTTGCCTCTTTC
AGTTGCCCCACAAGGCGGTTCTGGTGCTACTTGCACGACATCTAGCTGTA
AAGCCAACGTGAATGCTGTTTGTCCATCAGAGCTAGCAGTCAAAGGATCC
GATGGGAATGTTATTGCTTGCAAGAGTGCATGTGCAGCTTTTAATGAACC
ACAATATTGTTGCACTGGGGCATTCATAAACCTGAGACTTGCCCACCGAC
TAAATATTCTAAGATTTTCAAAGACCAGTGCCCTCAAGCTTATAGCTATG
CTTATGATGATCGCACTAGCACATTTTCTTGCACTGGTGGTCCCTAATTA
CGATATACTTTCTG
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