Homology
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match:
RS3A_BRARA (40S ribosomal protein S3a OS=Brassica rapa GN=RPS3A PE=2 SV=2)
HSP 1 Score: 309.301 bits (791), Expect = 1.234e-83
Identity = 155/191 (81.15%), Postives = 170/191 (89.01%), Query Frame = 3
Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMV-AQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683
DWYDIKAPS F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E+ AYRKIRLRAEDVQG+NVLT FWGM+FTTDKLRSLV+KW TLIE++VDVKTTDN+TLRLFCI FTKR NQVKRTCYAQ+SQIRQIR KMREIM+ +A+SCDLK LV KFI E IG++IEKAT IYPLQNVFIRKVKI
Sbjct: 28 DWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPESIGKDIEKATQGIYPLQNVFIRKVKI 218
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match:
RS3A_CHLRE (40S ribosomal protein S3a OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_168484 PE=3 SV=1)
HSP 1 Score: 290.426 bits (742), Expect = 5.930e-78
Identity = 141/190 (74.21%), Postives = 161/190 (84.74%), Query Frame = 3
Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683
DWYDIKAP+ F VRNVGKTLVTRTQGTKIASE LK RVFEVSL DL E+ A+RK+RLR EDVQG+N LTNFWGM+FTTDKLRSLVRKW TLIEA+VDVKTTD +TLR+FCI FTK+ Q+KRTCYAQ++QIRQIR+KM EI+ +A SCDLK LV KFI E IG++IEK+ IYPLQN FIRKVK+
Sbjct: 28 DWYDIKAPTMFTVRNVGKTLVTRTQGTKIASEALKGRVFEVSLADLQKNEDDAFRKMRLRVEDVQGRNCLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDGYTLRVFCISFTKKRQGQIKRTCYAQSAQIRQIRKKMMEIITREATSCDLKELVAKFIPESIGKDIEKSCQGIYPLQNTFIRKVKV 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match:
RS3A_OSTLU (40S ribosomal protein S3a OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_28528 PE=3 SV=1)
HSP 1 Score: 283.493 bits (724), Expect = 7.249e-76
Identity = 136/190 (71.58%), Postives = 165/190 (86.84%), Query Frame = 3
Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683
DWYDIKAPS F VRN+GKTLV+RTQGTKIAS+GLK R+FE+SL DL N+E+ ++RK++L+ EDVQGKNVLTNF GM+FTTDK+RSLVRKW +LIE +VDVKTTD +TLR+FCIGFTKR +Q KRTCYAQ++QIR+IR KM EI+ + +CDLK LV KFI EVIG+EIEK+ + IYPLQNV+IRKVKI
Sbjct: 28 DWYDIKAPSMFSVRNIGKTLVSRTQGTKIASDGLKGRIFEISLADLNNDEDQSFRKMKLKCEDVQGKNVLTNFAGMDFTTDKIRSLVRKWFSLIECFVDVKTTDGYTLRVFCIGFTKRRMDQAKRTCYAQSAQIRKIRAKMVEIITRECTTCDLKELVLKFIPEVIGKEIEKSCAGIYPLQNVYIRKVKI 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match:
RS3A_LENED (40S ribosomal protein S1 OS=Lentinula edodes GN=RPS1 PE=2 SV=1)
HSP 1 Score: 275.018 bits (702), Expect = 2.578e-73
Identity = 134/190 (70.53%), Postives = 160/190 (84.21%), Query Frame = 3
Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683
DWYDIKAPS F VRNVGKTLV R+QG K A++ LK R+ EVSLGDL EEE ++RKI+LR ++VQGKN LTNF GM+FT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF IGFTKR P QV++T YAQ+SQ+R+IR+KM EIM +A +CDLK LV+KF+ E IGREIEKA+ SIYPLQNV++RK KI
Sbjct: 28 DWYDIKAPSIFDVRNVGKTLVNRSQGLKNANDSLKGRIIEVSLGDLNKEEEQSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIGFTKRRPTQVRKTTYAQSSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYVRKAKI 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match:
RS3A_LACBS (40S ribosomal protein S1 OS=Laccaria bicolor (strain S238N-H82) GN=RPS1 PE=3 SV=2)
HSP 1 Score: 269.626 bits (688), Expect = 1.083e-71
Identity = 129/190 (67.89%), Postives = 158/190 (83.16%), Query Frame = 3
Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683
DWYDIKAPS F VRNVGKTL R+QG K A++ LK R+ EVSL DL +EE ++RKI+LR +++QGKN LTNF GM+FT+DKLRSLVRKW TL+EA+VDVKTTD + LRLF IGFTKR P+QV++T YAQ+SQ+R+IR+KM EIM +A +CDLK LV+KF+ E IGREIEKA SIYPLQNV++RK KI
Sbjct: 28 DWYDIKAPSIFEVRNVGKTLANRSQGLKNANDSLKGRIIEVSLADLNKDEEQSFRKIKLRIDEIQGKNCLTNFHGMDFTSDKLRSLVRKWQTLVEAHVDVKTTDGYLLRLFAIGFTKRRPSQVRKTTYAQSSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKAARSIYPLQNVYVRKAKI 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match:
RS3A_POSPM (40S ribosomal protein S1 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS1 PE=3 SV=1)
HSP 1 Score: 269.24 bits (687), Expect = 1.415e-71
Identity = 133/190 (70.00%), Postives = 156/190 (82.11%), Query Frame = 3
Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683
DWYDIKAPS F RNVGKTLV R+ G K A++ LK R+ E+SL DL N+EE A+RKI+LR ++VQGKN LTNF GM+F++DKLRSLVRKW TLIEA+VDVKTTD + LRLF IGFTKR P QV++T YAQ+SQIRQIR+KM EIM +A+SCDLK LV+KFI E IGREIEKA IYPLQNVF+ K KI
Sbjct: 28 DWYDIKAPSIFEKRNVGKTLVNRSSGLKNANDSLKGRIVEISLADLNNDEEQAFRKIKLRIDEVQGKNCLTNFHGMSFSSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIGFTKRRPTQVRKTTYAQSSQIRQIRQKMFEIMTREASSCDLKELVQKFIPEAIGREIEKAARGIYPLQNVFVHKAKI 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match:
RS3A_COPC7 (40S ribosomal protein S1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS1 PE=3 SV=1)
HSP 1 Score: 268.47 bits (685), Expect = 2.413e-71
Identity = 128/190 (67.37%), Postives = 158/190 (83.16%), Query Frame = 3
Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683
DWYDIKAPS F RNVGKTLV R+QG K A++ L+ R+ EVSL DL +EE ++RKI+LR +++QG+N LTNF GM+FT+DKLRSLVRKW TL+EA+VDVKTTD + LRLF IGFTKR P QVK+T YAQT+Q+R++R+KM EI+ +A SCDLK LV+KF+ E IGREIEKA+ SIYPLQNV+IRK KI
Sbjct: 28 DWYDIKAPSIFETRNVGKTLVNRSQGLKNANDSLRGRIIEVSLADLNKDEEQSFRKIKLRVDEIQGRNCLTNFHGMDFTSDKLRSLVRKWQTLVEAHVDVKTTDGYLLRLFAIGFTKRRPTQVKKTTYAQTAQVRELRKKMFEIITREATSCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYIRKAKI 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match:
RS3A_PYRTR (40S ribosomal protein S1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=rps1 PE=3 SV=1)
HSP 1 Score: 262.692 bits (670), Expect = 1.324e-69
Identity = 130/190 (68.42%), Postives = 154/190 (81.05%), Query Frame = 3
Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683
DWY+IKAP F VR+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V VKTTD++ LRLFCI FTKR PNQVK+T YAQ+SQIR IR+KM EIM A+SC L L +K I EVIGREIEKAT IYPLQNV +RKVK+
Sbjct: 27 DWYNIKAPGTFAVRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDDYLLRLFCIAFTKRRPNQVKKTTYAQSSQIRAIRKKMVEIMARDASSCTLAQLTQKLIPEVIGREIEKATQGIYPLQNVHVRKVKL 216
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match:
RS3A_SUBDO (40S ribosomal protein S3a OS=Suberites domuncula PE=2 SV=1)
HSP 1 Score: 258.84 bits (660), Expect = 1.912e-68
Identity = 126/190 (66.32%), Postives = 154/190 (81.05%), Query Frame = 3
Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683
DWYD+KAPS F VRN+GKTLVTRTQG K+AS+GLK RVFEVSL DL N+E+ ++RK RL +ED+QGKNVLTNF GM TTDKLR+LV+KW TLIEA VDVKTTD + LRLFCIGFTKR PNQ+K+T YA++SQ R IR+KM ++M + + DLK V K I + IG++IEK SIYPL +VF+RKVK+
Sbjct: 28 DWYDVKAPSMFAVRNIGKTLVTRTQGKKLASDGLKGRVFEVSLADLQNDEQ-SFRKFRLISEDIQGKNVLTNFHGMTMTTDKLRALVKKWQTLIEANVDVKTTDGYLLRLFCIGFTKRQPNQIKKTSYAKSSQCRSIRKKMVDVMTREVSQIDLKETVNKLIPDSIGKDIEKKCQSIYPLHDVFVRKVKV 216
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match:
RS3A_ASPCL (40S ribosomal protein S1 OS=Aspergillus clavatus GN=rps1 PE=3 SV=1)
HSP 1 Score: 258.07 bits (658), Expect = 3.261e-68
Identity = 127/190 (66.84%), Postives = 154/190 (81.05%), Query Frame = 3
Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683
D Y +KAPS F++R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR +++QGKN LTNF G++FTTDKLRSLVRKW +LIEA V VKTTD++ LRLF I FTKR PNQ+K+T YA++SQIR IR+KM EIM +AASC L L K I EVIGREIEKAT IYPLQNV IRKVK+
Sbjct: 28 DEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREAASCSLAQLTHKLIPEVIGREIEKATQGIYPLQNVHIRKVKL 217
The following BLAST results are available for this feature:
BLAST of FC930924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 200
100 200 300 400 500 600 Expect = 1.23e-83 / Id = 81.15 Expect = 5.93e-78 / Id = 74.21 Expect = 7.25e-76 / Id = 71.58 Expect = 2.58e-73 / Id = 70.53 Expect = 1.08e-71 / Id = 67.89 Expect = 1.41e-71 / Id = 70.00 Expect = 2.41e-71 / Id = 67.37 Expect = 1.32e-69 / Id = 68.42 Expect = 1.91e-68 / Id = 66.32 Expect = 3.26e-68 / Id = 66.84 Sequence RS3A_BRARA RS3A_CHLRE RS3A_OSTLU RS3A_LENED RS3A_LACBS RS3A_POSPM RS3A_COPC7 RS3A_PYRTR RS3A_SUBDO RS3A_ASPCL
Match Name E-value Identity Description
RS3A_BRARA 1.234e-83 81.15 40S ribosomal protein S3a OS=Brassica rapa GN=RPS3... [more]
RS3A_CHLRE 5.930e-78 74.21 40S ribosomal protein S3a OS=Chlamydomonas reinhar... [more]
RS3A_OSTLU 7.249e-76 71.58 40S ribosomal protein S3a OS=Ostreococcus lucimari... [more]
RS3A_LENED 2.578e-73 70.53 40S ribosomal protein S1 OS=Lentinula edodes GN=RP... [more]
RS3A_LACBS 1.083e-71 67.89 40S ribosomal protein S1 OS=Laccaria bicolor (stra... [more]
RS3A_POSPM 1.415e-71 70.00 40S ribosomal protein S1 OS=Postia placenta (strai... [more]
RS3A_COPC7 2.413e-71 67.37 40S ribosomal protein S1 OS=Coprinopsis cinerea (s... [more]
RS3A_PYRTR 1.324e-69 68.42 40S ribosomal protein S1 OS=Pyrenophora tritici-re... [more]
RS3A_SUBDO 1.912e-68 66.32 40S ribosomal protein S3a OS=Suberites domuncula P... [more]
RS3A_ASPCL 3.261e-68 66.84 40S ribosomal protein S1 OS=Aspergillus clavatus G... [more]
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