FC930924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_THEAN (40S ribosomal protein S3a OS=Theileria annulata GN=TA17795 PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.767e-59 Identity = 109/190 (57.37%), Postives = 148/190 (77.89%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 +WY++KAP F VRN G+TLVT+T GTK+A++GLK RVFE+SL DL +E+ AYRKI+L EDVQG+N LT+F G + T DKL SL+RK ++LIEA+ DVKT D + LR+FC+G+TKR P Q+K TCY ++S++R I +KM +M +A++ LK LV+K I E IG+EIEKA SI+PLQNV +RK+K+ Sbjct: 28 EWYNLKAPVTFNVRNFGQTLVTKTIGTKLATDGLKGRVFEMSLADLNADEDQAYRKIKLSCEDVQGRNCLTDFHGTSVTRDKLCSLIRKNYSLIEAFADVKTLDGYNLRMFCVGYTKRRPGQLKSTCYVRSSKVRLIHKKMVAVMTNEASNSTLKELVKKVIPESIGKEIEKACKSIFPLQNVLVRKIKV 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_UNCRE (40S ribosomal protein S1 OS=Uncinocarpus reesii (strain UAMH 1704) GN=RPS1 PE=3 SV=2) HSP 1 Score: 227.639 bits (579), Expect = 4.721e-59 Identity = 119/190 (62.63%), Postives = 148/190 (77.89%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 D Y +KAPS F R+VGKT+V RT G K A++ LK R+FEVSL DL N++ H++RKI+LR ++VQGKN LTNF GM+FT+DKLRSLVRKW +LIEA V VKTTD++ +RLF I FTKR QVK+T YA++SQIR IR+KM EI+ +A++ L L K + EVIGREIEKAT IYPLQNV IRKVK+ Sbjct: 28 DEYLVKAPSTFATRDVGKTIVNRTVGLKNANDSLKGRIFEVSLADLQNDQAHSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLVRLFAIAFTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASTRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKL 216
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_ZYGRC (40S ribosomal protein S1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.165e-59 Identity = 110/190 (57.89%), Postives = 140/190 (73.68%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 +WYDIKAPS F+ RNVGKTLV R+ G K AS+ LK RV E L DL E+H++RKI+LR ++VQGKN+LTN GM+FTTDK RS+VRKW TLIEA V VKT+D + +R+F I FT++ PNQVK+TCYAQ+S IR IR+ EI+ + + L K I EVI +E+E AT I+PLQNV +RKVK+ Sbjct: 28 EWYDIKAPSTFKNRNVGKTLVNRSAGLKSASDTLKGRVVEACLADLQGSEDHSFRKIKLRVDEVQGKNLLTNIHGMDFTTDKYRSMVRKWQTLIEAQVTVKTSDEYVIRVFAIAFTRKQPNQVKKTCYAQSSHIRAIRKVFSEILTREVQNSTLAQFTSKLIPEVINKEMENATKDIFPLQNVHVRKVKL 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_LACTC (40S ribosomal protein S1 OS=Lachancea thermotolerans (strain CBS 6340) GN=RPS1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.165e-59 Identity = 112/190 (58.95%), Postives = 140/190 (73.68%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 +WYDIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF G++ TTDK RS+VRKW TLIEA V VKT D + LR+F I FT+R PNQVK+ CYAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT I+PLQNV IRKVK+ Sbjct: 28 EWYDIKAPSTFENRNVGKTLVNKSTGLKNASDYLKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGLDLTTDKYRSMVRKWQTLIEANVTVKTADEYVLRVFAIAFTRRQPNQVKKACYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKL 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMA (40S ribosomal protein S3a OS=Bombyx mandarina PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.165e-59 Identity = 115/192 (59.90%), Postives = 143/192 (74.48%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E ++RK RL AEDVQG+NVL NF GM+ TTDKLR +V+KW TLIEA +DVKTTD + LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + I ++IEKA IYPL++V IRKVK+ Sbjct: 29 DWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 220
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_ANODA (40S ribosomal protein S3a OS=Anopheles darlingi PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 8.052e-59 Identity = 113/192 (58.85%), Postives = 146/192 (76.04%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAP+ F+ R VGKTLV RTQGT+IAS+GLK RVFEVSL DL NE+ E ++RK +L AE V G++VL NF GM+ TTDKLRS+V+KW TLIE VDVKTTD + LR+FCIGFT + ++TCYAQ SQI+ IR++M I+ + + DLK +VEK + + I ++IEKA +YPL +VFIRKVK+ Sbjct: 29 DWYDVKAPNMFKNRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNEQDAERSFRKFKLIAESVNGRDVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDGYLLRVFCIGFTIKDSVSQRKTCYAQHSQIKNIRQRMTTIIKREIINSDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVFIRKVKV 220
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_SPOFR (40S ribosomal protein S3a OS=Spodoptera frugiperda PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.052e-58 Identity = 114/192 (59.38%), Postives = 143/192 (74.48%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E ++RK RL AEDVQG+NVL NF GM+ TTDKLR +V+KW TL+EA +DVKTTD + LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + I ++IEKA IYPL++V IRKVK+ Sbjct: 29 DWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLVEANIDVKTTDGYLLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 220
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_CANGA (40S ribosomal protein S1 OS=Candida glabrata GN=RPS1 PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.052e-58 Identity = 111/190 (58.42%), Postives = 141/190 (74.21%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 +WYDIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR +DVQGKN+LTNF GM+FT DKLRS+VRKW TLIEA V VKT+D + +R+F I FT++ NQVKRT YAQ+S IR IR+ + +I+ + ++ L K I EVI +EIE AT I+PLQNV IRKVK+ Sbjct: 28 EWYDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDDVQGKNLLTNFHGMDFTADKLRSMVRKWQTLIEANVTVKTSDEYIIRVFAIAFTRKQSNQVKRTAYAQSSHIRAIRKVISDILTREVSNSTLAQFTSKLIPEVINKEIENATKDIFPLQNVHIRKVKL 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_VANPO (40S ribosomal protein S1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS1 PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.794e-58 Identity = 112/190 (58.95%), Postives = 142/190 (74.74%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 +W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM+FTTDK+RS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKRT YAQ+S IR IR+ + EI+ + L L K I EVI +EIE AT I+PLQNV IRKVK+ Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKVRSMVRKWQTLIEANVTVKTSDDYVLRVFAIAFTRKQSNQVKRTSYAQSSHIRAIRKVISEILTREVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKL 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_ASHGO (40S ribosomal protein S1 OS=Ashbya gossypii GN=RPS1 PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.794e-58 Identity = 111/190 (58.42%), Postives = 142/190 (74.74%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 +WYDIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF G++FTTDKLRS+VRKW TLIEA V VKT D++ LR+F I FT+R NQ+K+T YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT I+PLQNV IRKVK+ Sbjct: 28 EWYDIKAPSTFENRNVGKTLVNKSTGLKNAADFLKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGLDFTTDKLRSMVRKWQTLIEANVTVKTADDYVLRVFAIAFTRRQSNQIKKTSYAQSSHIRAIRKVISEILTREVQNATLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKL 217 The following BLAST results are available for this feature:
BLAST of FC930924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930924 ID=FC930924; Name=FC930924; organism=Citrus clementina; type=EST; length=689bpback to top |