FC930924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS1 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS1B PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.060e-58 Identity = 110/190 (57.89%), Postives = 142/190 (74.74%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT I+PLQN+ +RKVK+ Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKL 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMO (40S ribosomal protein S3a OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.816e-58 Identity = 114/192 (59.38%), Postives = 142/192 (73.96%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E ++RK RL AE VQG+NVL NF GM+ TTDKLR +V+KW TLIEA +DVKTTD + LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + I ++IEKA IYPL++V IRKVK+ Sbjct: 29 DWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 220
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_MONBE (40S ribosomal protein S3a OS=Monosiga brevicollis GN=34920 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57 Identity = 108/190 (56.84%), Postives = 147/190 (77.37%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 +WYD+KAPS F+ R VGKT V RT GTK++++GL+ RV+E+SL DL N++E +RK++L+ E++QG LTNF GM+ TTDKLRSLV+KW +LIEA+VDVKT D + LR+F IGFTK+ N ++TCYAQ++Q R +R KM EIM + A+CDLK V K + IG+EI+K SI+PLQ+V+IRKVK+ Sbjct: 28 EWYDVKAPSYFKKRQVGKTPVNRTAGTKLSADGLRGRVYEMSLADL-NDDESTFRKVKLQVEEIQGTECLTNFHGMSLTTDKLRSLVKKWRSLIEAFVDVKTNDGYVLRIFSIGFTKKQANSDRKTCYAQSAQKRALRAKMVEIM-QREATCDLKEFVSKLMPGTIGQEIQKKCQSIFPLQDVYIRKVKV 215
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_PLAYO (40S ribosomal protein S3a OS=Plasmodium yoelii yoelii GN=PY02291 PE=3 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.679e-56 Identity = 107/190 (56.32%), Postives = 143/190 (75.26%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 +WYD+ AP F VR GKTLVT+T G K+A++GLK R++EV+L DL N+E+ A++KI+L + + ++ T+F G++ T DKL SL+RK +TLIE DVKT DN+ LR+FCI FTK+ PNQ K TCYAQTSQI++IR+KM +IM A+A+ LK LV+K I E IG+E+EK I+PLQNV IRKVKI Sbjct: 28 EWYDLNAPKMFMVRKFGKTLVTKTIGKKLATDGLKGRIYEVNLADLNNDEDQAHKKIKLICDHIINRDCYTDFCGLSITRDKLCSLIRKGYTLIEGCTDVKTIDNYHLRMFCIAFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMHAEASKVLLKDLVKKIIPESIGKEVEKQCKKIFPLQNVLIRKVKI 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_LODEL (40S ribosomal protein S1 OS=Lodderomyces elongisporus GN=RPS1 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.679e-56 Identity = 110/189 (58.20%), Postives = 147/189 (77.78%), Query Frame = 3 Query: 117 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 +YDI+APS F VGKTLV ++ GT +++ LK RVFEV+LGDL E++AYRK++LRA++VQG +LTNF GM+FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR NQVK+T YAQ+S++R++R+KM EI+ + ++ L L K I EVI REIEK+T +I+PLQNV IRKVK+ Sbjct: 17 FYDIQAPSTFTNTYVGKTLVNKSAGTFSSTDALKGRVFEVNLGDL-TLEDNAYRKVKLRADEVQGNKILTNFHGMDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMVEILTREVSNSTLSQLTSKLIPEVISREIEKSTQTIFPLQNVHIRKVKL 204
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_DROGR (40S ribosomal protein S3a OS=Drosophila grimshawi GN=RpS3A PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.679e-56 Identity = 107/192 (55.73%), Postives = 141/192 (73.44%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT+D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+ Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTSDGYLLRIFCIGFTSKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGVDLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKV 220
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_DROVI (40S ribosomal protein S3a OS=Drosophila virilis GN=RpS3A PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.193e-56 Identity = 107/192 (55.73%), Postives = 140/192 (72.92%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+ Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTSKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKV 220
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_DROPS (40S ribosomal protein S3a OS=Drosophila pseudoobscura pseudoobscura GN=RpS3A PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.864e-56 Identity = 107/192 (55.73%), Postives = 140/192 (72.92%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+ Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKV 220
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_DROPE (40S ribosomal protein S3a OS=Drosophila persimilis GN=RpS3A PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.864e-56 Identity = 107/192 (55.73%), Postives = 140/192 (72.92%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+ Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKV 220
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_DROME (40S ribosomal protein S3a OS=Drosophila melanogaster GN=RpS3A PE=1 SV=3) HSP 1 Score: 218.394 bits (555), Expect = 2.864e-56 Identity = 107/192 (55.73%), Postives = 140/192 (72.92%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+ Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKV 220 The following BLAST results are available for this feature:
BLAST of FC930924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930924 ID=FC930924; Name=FC930924; organism=Citrus clementina; type=EST; length=689bpback to top |