FC930924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_TORRU (40S ribosomal protein S3a OS=Tortula ruralis GN=RPS3A PE=2 SV=3) HSP 1 Score: 248.054 bits (632), Expect = 3.375e-65 Identity = 131/191 (68.59%), Postives = 153/191 (80.10%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK-ATSSIYPLQNVFIRKVKI 683 DWYDIKAP R G+ RT GTKIAS+GL RVFEVSL DL N+E+ A+RKI+LRAEDVQGKNVLTNFWGM+FTTDKLRSLVRKW +LI+A+VDVKTTDN+ +R+FCI FTK+ PN R YAQ+SQI IRRKMREIMV +A +CDLK LV KFI EVIG+EI++ + IYPLQ+ FIRKVKI Sbjct: 28 DWYDIKAPPRSRRARSGRRC-HRTAGTKIASDGLNFRVFEVSLADLQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCIAFTKKRPNHT-RNFYAQSSQI-AIRRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEWRSQGIYPLQSTFIRKVKI 215
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_OPHHA (40S ribosomal protein S3a OS=Ophiophagus hannah GN=RPS3A PE=2 SV=3) HSP 1 Score: 247.669 bits (631), Expect = 4.408e-65 Identity = 119/190 (62.63%), Postives = 152/190 (80.00%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN L NF GM+ T DK+ S+V+KW T+IEA++DVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +V++RKVK+ Sbjct: 29 DWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKM 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3AB_XENLA (40S ribosomal protein S3a-B OS=Xenopus laevis GN=rps3a-B PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.408e-65 Identity = 121/190 (63.68%), Postives = 152/190 (80.00%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GM+ T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +V+ RKVK+ Sbjct: 29 DWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMSREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYARKVKM 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_CALJA (40S ribosomal protein S3a OS=Callithrix jacchus GN=RPS3A PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.519e-65 Identity = 120/190 (63.16%), Postives = 151/190 (79.47%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL D N+E A+RK +L EDVQGKN LTNF GM+ T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+ QIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+ Sbjct: 29 DWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADFQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKHNNQIRKTSYAQHQQVCQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKM 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_NEMVE (40S ribosomal protein S3a OS=Nematostella vectensis GN=v1g242621 PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.283e-64 Identity = 121/190 (63.68%), Postives = 152/190 (80.00%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAPS F +R +GKT+VTRT GTKIAS+GLK RVFEVSL DL N+E A+RK +L E+VQG+N LTNF GMN TTDKLRSLV+KW TLIEA VDVKTTD + LR+FCIGFTKR NQ+K+T YA+ +QI+ IR+KM +I+ + ++ DLK +V K I + IG++IEK+ SIYPL +V IRKVK+ Sbjct: 28 DWYDVKAPSMFNIRQIGKTVVTRTAGTKIASDGLKGRVFEVSLADLQNDEI-AFRKFKLMCEEVQGRNCLTNFHGMNMTTDKLRSLVKKWQTLIEAAVDVKTTDGYLLRMFCIGFTKRRQNQIKKTAYAKHTQIKAIRKKMVDIITREVSTNDLKEVVNKLIPDSIGKDIEKSCQSIYPLHDVHIRKVKV 216
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_CANTT (40S ribosomal protein S1 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=RPS1 PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.857e-64 Identity = 117/190 (61.58%), Postives = 152/190 (80.00%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DW+DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR NQ+K+T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T +I+PLQNV IRKVK+ Sbjct: 28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQIKKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKL 217
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_PERAM (40S ribosomal protein S3a OS=Periplaneta americana GN=Parcxpwex01 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 3.732e-64 Identity = 121/192 (63.02%), Postives = 148/192 (77.08%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAPS F R +GKTLV RTQGTKIASEGLK+RVFEVSL DL N+ E ++RK RL AEDVQG+NVLTNF GM+ TTDKLRS+V+KW TLIEA VDVKTTD + LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ S DLK +V K + + I ++IEKA IYPL +V+IRKVK+ Sbjct: 29 DWYDVKAPSMFATRQIGKTLVNRTQGTKIASEGLKYRVFEVSLADLQNDNDAERSFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFCIGFTNKDQMSQRKTCYAQHTQVRAIRKKMVEIITRDVTSSDLKEVVNKLLPDSIAKDIEKACQGIYPLHDVYIRKVKV 220
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_TRIAD (40S ribosomal protein S3a OS=Trichoplax adhaerens GN=TRIADDRAFT_36460 PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 4.874e-64 Identity = 120/190 (63.16%), Postives = 152/190 (80.00%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 DWYD+KAPS F VRN+GKTLV RT GTKIAS+GLK RVFEVSL DL N E A+RK RL AE+V GK+VLTNF GM+ T+DKL+SLV+KW TLIEA++D KTTD + LR F IGFTK+ PNQ+K+T YA+TSQ R IR+KM +I+ + ++ DLK +V + I + IG++IEK+ SIYPL +V+IRKVK+ Sbjct: 28 DWYDVKAPSQFAVRNIGKTLVNRTSGTKIASDGLKGRVFEVSLADLQNGEI-AFRKFRLIAEEVLGKSVLTNFHGMSMTSDKLKSLVKKWQTLIEAHIDAKTTDGYLLRFFAIGFTKKRPNQIKKTAYAKTSQCRSIRKKMTDIITREVSAIDLKEVVNRLIPDSIGKDIEKSCQSIYPLHDVYIRKVKV 216
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_PARBP (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain Pb03) GN=RPS1 PE=3 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 4.874e-64 Identity = 125/190 (65.79%), Postives = 151/190 (79.47%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 D Y +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I FTKR PNQ+K+T YAQ+SQIR IR+KM EI+ +A + L L K I EVIGREIEKAT IYPLQNV IRKVK+ Sbjct: 28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAQSSQIRAIRKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKL 216
BLAST of FC930924 vs. ExPASy Swiss-Prot
Match: RS3A_PARBD (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain Pb18) GN=RPS1 PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 4.874e-64 Identity = 125/190 (65.79%), Postives = 151/190 (79.47%), Query Frame = 3 Query: 114 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 683 D Y +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I FTKR PNQ+K+T YAQ+SQIR IR+KM EI+ +A + L L K I EVIGREIEKAT IYPLQNV IRKVK+ Sbjct: 28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAQSSQIRAIRKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKL 216 The following BLAST results are available for this feature:
BLAST of FC930924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930924 ID=FC930924; Name=FC930924; organism=Citrus clementina; type=EST; length=689bpback to top |