FC930926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930926 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.928e-25 Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 1 Query: 253 EKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTCPVI 714 E+ +H + G AD+ +W+N++ +LG T +W LFE Y V + +LS+ +LFLW+ ++ N+ P++P + + E+FV A A+R IN LAV REI GR+ K+ V LW +S VGN+ NF+T+ Y+ VL P + Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFL 155
BLAST of FC930926 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.546e-24 Identity = 60/160 (37.50%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 250 REKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS--NASTFINKSPPEIPVVTLPE---KFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTCPVI 714 R + ++H LG G+ ADI W+NKK S +LG T +W LFE++EY IT +C I +L + + +WS +S I PP I + + E +F+ +IN + L +I+SG+D + + LW+LS+VGN+ + +TL YIVFV L T P++ Sbjct: 18 RRRSLYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLIQSKPPSINDLRISESNWRFLFN-------KINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPML 170
BLAST of FC930926 vs. ExPASy Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.190e-23 Identity = 54/151 (35.76%), Postives = 89/151 (58.94%), Query Frame = 1 Query: 262 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTCPVI 714 +H LGAG AD+ LWRN+ + +L +T W LFE Y+L++ V ++ +L +A+ FLW+ ++T +N+ P +P + +PE+F + A LR IN L++ +I R+ + L V LW +S VG N +TL YI +L + P++ Sbjct: 13 VHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIV 163
BLAST of FC930926 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.383e-22 Identity = 50/163 (30.67%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 226 SKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTCPVI 714 S +RL GR+ +H +G GK AD+ LWR + +S GV+ +T W++FE +++ + ++ + + F+ + S F N+ +P + L E+ V A++ R ++N L + ++ G D + F V+ LWLLS +G++ + TL YI +L T P + Sbjct: 20 SSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPAL 182
BLAST of FC930926 vs. ExPASy Swiss-Prot
Match: RTNLO_ARATH (Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.821e-15 Identity = 50/152 (32.89%), Postives = 79/152 (51.97%), Query Frame = 1 Query: 262 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSN-ASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTCPVI 714 + +LG G AD+ LW++K S L AT W L E +E L+ L+C I +L + +LFLW+ F + PP + P+ + AL + L +L EIA G+D K FL I + ++ +G++ + +T+ YI V T PV+ Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFLWAKFGEVFFTRRPPTPEELNQPDSPL----KALFSMMEGHLLMLYEIAYGKDNKTFLKTILYVAIIYNIGSYISLLTILYICLVCSMTIPVV 151
BLAST of FC930926 vs. ExPASy Swiss-Prot
Match: RTNLM_ARATH (Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.119e-14 Identity = 41/145 (28.28%), Postives = 75/145 (51.72%), Query Frame = 1 Query: 295 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTCPVIMRVRG 729 DI+LWR KK++ L +T+ W+L + IT+V I I ++++FLW + ++K PE+ + + E+FV+E + R + + + + + + F + G W+LS +GN +F T +I V+ T P + G Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNLLDFHTCLFIGLVMGLTVPKLWEEYG 162 The following BLAST results are available for this feature:
BLAST of FC930926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930926 ID=FC930926; Name=FC930926; organism=Citrus clementina; type=EST; length=744bpback to top |