FC930930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS7 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1A PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.308e-53 Identity = 104/180 (57.78%), Postives = 131/180 (72.78%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EVI +EIE T I+PL Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPL 207
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS6 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1A PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.308e-53 Identity = 104/180 (57.78%), Postives = 131/180 (72.78%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EVI +EIE T I+PL Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPL 207
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS2 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain JAY291) GN=RPS1A PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.308e-53 Identity = 104/180 (57.78%), Postives = 131/180 (72.78%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EVI +EIE T I+PL Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPL 207
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS1 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS1A PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.308e-53 Identity = 104/180 (57.78%), Postives = 131/180 (72.78%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EVI +EIE T I+PL Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPL 207
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A_VANPO (40S ribosomal protein S1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS1 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.015e-53 Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM+FTTDK+RS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKRT YAQ+S IR IR+ + EI+ + L L K I EVI +EIE T I+PL Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKVRSMVRKWQTLIEANVTVKTSDDYVLRVFAIAFTRKQSNQVKRTSYAQSSHIRAIRKVISEILTREVQGSTLAQLTSKLIPEVINKEIENATKDIFPL 207
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A_ASHGO (40S ribosomal protein S1 OS=Ashbya gossypii GN=RPS1 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.015e-53 Identity = 102/180 (56.67%), Postives = 132/180 (73.33%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +WYDIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF G++FTTDKLRS+VRKW TLIEA V VKT D++ LR+F I FT+R NQ+K+T YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE T I+PL Sbjct: 28 EWYDIKAPSTFENRNVGKTLVNKSTGLKNAADFLKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGLDFTTDKLRSMVRKWQTLIEANVTVKTADDYVLRVFAIAFTRRQSNQIKKTSYAQSSHIRAIRKVISEILTREVQNATLAQLTSKLIPEVINKEIENATKDIFPL 207
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAST (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae GN=RPS1B PE=1 SV=3) HSP 1 Score: 208.379 bits (529), Expect = 3.015e-53 Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE T I+PL Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPL 207
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS7 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1B PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.015e-53 Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE T I+PL Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPL 207
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS6 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1B PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.015e-53 Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE T I+PL Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPL 207
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS2 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain JAY291) GN=RPS1B PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.015e-53 Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE T I+PL Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPL 207 The following BLAST results are available for this feature:
BLAST of FC930930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930930 ID=FC930930; Name=FC930930; organism=Citrus clementina; type=EST; length=696bpback to top |