FC930933

Overview
NameFC930933
Unique NameFC930933
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length610
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 2.645e-20
Identity = 59/147 (40.14%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMGV---VKSNTKCSTVGIQ-GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            E K   F+RA +AEF+A   F++IS+ + +G    +KSN     V     ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGT 148          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 4.512e-20
Identity = 59/147 (40.14%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMGV---VKSNTKCSTVGIQ-GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            E K   F+RA +AEF+A   F++IS+ + +G    +KSN     V     ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGT 148          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 5.892e-20
Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMG----------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            E+K   F+RA +AEF+A   F++IS+ + +G          +V+ N K S         AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +AHG   G GLG EIIGT
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSL--------AFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSL--GRNDLAHGVNSGQGLGIEIIGT 146          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 5.892e-20
Identity = 58/145 (40.00%), Postives = 82/145 (56.55%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            E K   F+RA +AEF+AT  F++IS+ + +G      N + +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RAL Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT
Sbjct:    4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSL--GRNDLADGVNSGQGLGIEIIGT 146          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19
Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMG----------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            E+K   F+RA +AEF+A   F++IS+ + +G          +V+ N K S         AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI  + ++ G   +     L  G N +A G   G GLG EIIGT
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSL--------AFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSL--GRNDLARGVNSGQGLGIEIIGT 146          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19
Identity = 57/145 (39.31%), Postives = 81/145 (55.86%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            E K   F+RA +AEF+A   F++IS+ + +G      N + +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RAL Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT
Sbjct:    4 EFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSL--GRNDLADGVNSGQGLGIEIIGT 146          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19
Identity = 57/147 (38.78%), Postives = 82/147 (55.78%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMG----VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            E K   F+RA +AEF+A   F++IS+ + +G    V  + T  +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSL--GRNELAPGVNSGQGLGIEIIGT 148          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 4.988e-19
Identity = 57/147 (38.78%), Postives = 82/147 (55.78%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMG----VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            E K   F+RA +AEF+A   F++IS+ + +G    V  + T  +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT
Sbjct:    4 EFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSL--GLNSLAPGVDSGQGLGIEIIGT 148          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.515e-18
Identity = 56/153 (36.60%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMGV-----VKSNTKCSTVG----IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            E K  +F+RA IAEF+A   F++IS+   +G       K+N    TVG    I  ++ AFG  I  +      +SG H+NPAVTLG  L+ ++S+ +A+ Y++ QCLGA+    ++ G     +   L  G N ++ G + G GLG EI+ TF
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKAN---QTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSL--GLNGLSPGVSAGQGLGVEILVTF 151          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16
Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            E+ S +F +A  AEF+AT  F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+V Q +GAI GAG++ G       G LA   N + +  T G  +  E+I TF
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLA--VNSLNNNTTPGQAVVVEMILTF 140          
The following BLAST results are available for this feature:
BLAST of FC930933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
AQP1_BOVIN2.645e-2040.14Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP4.512e-2040.14Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE5.892e-2039.22Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_HUMAN5.892e-2040.00Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_RAT2.924e-1938.56Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_PONAB2.924e-1939.31Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_CANFA2.924e-1938.78Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_PIG4.988e-1938.78Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQPA_RANES5.515e-1836.60Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP5_PIG1.774e-1637.50Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34110F02EF PostHarvP1 Citrus clementina cDNA clone C34110F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930933 ID=FC930933; Name=FC930933; organism=Citrus clementina; type=EST; length=610bp
TGACTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTAAAGAAGA
GGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGA
CGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCG
CCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGG
TATAGCCGAGTTCATAGCCACTTTTCCTTTCTTGTACATCTCCGTACTGA
CAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGCATT
CAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTG
CACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCC
TGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTG
ATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCAT
GGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTC
ATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTT
TGTTCTTGTC
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