FC930933

Overview
NameFC930933
Unique NameFC930933
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length610
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.169e-14
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            E+ S +F +A  AEF+AT  F++  + + +         +   +  I+ AFG  I  +      +SGGH+NPA+TL L +  ++SL RA+FY+V Q +GAI GA ++ G         LA   N + +  T G  + AE+I TF
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNLA--VNALNNNTTAGQAVVAEMILTF 140          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.241e-14
Identity = 49/143 (34.27%), Postives = 71/143 (49.65%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            E +S+SF+RA  AEF  T  +++  +   +             +  IA AFG ++  +V     +SG HINPAVT    +  ++SL RA+FY+  Q LGA+ GA V+ G   A   G LA   N +  G + G     EI  T
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASL-----KWAAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLA--LNTLHPGVSLGQATTVEIFLT 138          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 76.6406 bits (187), Expect = 1.076e-13
Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  184 SFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            + +R  +AEF+ TF  + I + +  G    +   +      IA+ FG ++  L      +SG HINPAVT+GL +   +S+ +  FY+V QC+GAI GA V+K    +   G L  G   +A G + G G+  E + TF
Sbjct:   21 NIWRMLVAEFLGTFFLVAIGIGSTTGWTDYSPTLTQ-----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVGGL--GVTGIAPGLSTGQGVLIEALITF 152          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.132e-13
Identity = 52/151 (34.44%), Postives = 77/151 (50.99%), Query Frame = 1
Query:  166 GELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTF 600
            G+  S S  +A ++EFIAT  F++  V + +   K  S+      G+  IA A    +FV V   A ISGGH+NPAVTLGL +   ++L    FY + QCLG+I    ++           +  G +V  HG + G    +G+  EI+ TF
Sbjct:   10 GDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLV---------FVTNGKSVPTHGVSAGLGAVEGVVMEIVVTF 151          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.090e-13
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 1
Query:  184 SFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            + +R  +AEF+ TF  + I + + MG         T     IA+ FG ++  L      +SG HINPAVT+GL +   +S+ +  FY+V QC+GAI GA ++K    +   G L  G   +    T G G+  E + TF
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPTMTQ----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIGGL--GVTGIDPRLTAGQGVMIEALITF 153          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.342e-13
Identity = 51/151 (33.77%), Postives = 76/151 (50.33%), Query Frame = 1
Query:  166 GELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTF 600
            G+  S +  +A +AEFIAT  F++  V + +   K  S+      G+  +A A    +FV V   A +SGGH+NPAVTLGL +   +++   LFY + QCLG+     ++K          +  G +V  HG   G     G+  EII TF
Sbjct:   10 GDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLK---------FVTNGLSVPTHGVAAGMDAIQGVVMEIIITF 151          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.342e-13
Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 1
Query:  193 RAGIAEFIATFPFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            RA +AEFI+T  F++  V + +   K  S+    T G+  IA   G  +FV V   A ISGGH+NPAVT GL +  ++++   +FY + Q LG+     ++K   G      LA   + VA G    +G+  EII TF
Sbjct:   19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGG-----LAVPTHSVAAGLGSIEGVVMEIIITF 151          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.342e-13
Identity = 51/143 (35.66%), Postives = 74/143 (51.75%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            EL+S +F RA  AEF+AT  F++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT+   +   +S+ RA FY+  Q LGA+ GA ++     A   G LA   N +++  T G  +  E+  T
Sbjct:    3 ELRSIAFSRAVFAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLA--VNALSNSTTAGQAVTVELFLT 138          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.976e-13
Identity = 50/143 (34.97%), Postives = 70/143 (48.95%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            EL+S SF+RA  AEF AT  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA+ YM  Q LGA+ GA V+     A   G LA   N +  G + G     EI  T
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLA--LNTLHPGVSLGQATTVEIFLT 138          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.190e-12
Identity = 49/143 (34.27%), Postives = 73/143 (51.05%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGT 597
            EL+S +F RA +AEF+AT  F++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA+FY+  Q LGA+ GA ++         G LA   N + +  T G  +  E+  T
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLA--VNALNNNSTAGQAVTVELFLT 138          
The following BLAST results are available for this feature:
BLAST of FC930933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
AQP5_SHEEP2.169e-1434.03Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
MIP_RANPI8.241e-1434.27Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP_ANOGA1.076e-1333.81Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIP23_ARATH3.132e-1334.44Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
AQP_AEDAE4.090e-1333.81Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
TIP_ANTMA5.342e-1333.77Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP21_ARATH5.342e-1336.23Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQP2_HUMAN5.342e-1335.66Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
MIP_RABIT6.976e-1334.97Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
AQP2_SHEEP1.190e-1234.27Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34110F02EF PostHarvP1 Citrus clementina cDNA clone C34110F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930933 ID=FC930933; Name=FC930933; organism=Citrus clementina; type=EST; length=610bp
TGACTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTAAAGAAGA
GGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGA
CGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCG
CCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGG
TATAGCCGAGTTCATAGCCACTTTTCCTTTCTTGTACATCTCCGTACTGA
CAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGCATT
CAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTG
CACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCC
TGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTG
ATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCAT
GGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTC
ATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTT
TGTTCTTGTC
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