FC930940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA_LACSA (Glutamine synthetase OS=Lactuca sativa PE=2 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 2.246e-55 Identity = 91/99 (91.92%), Postives = 95/99 (95.96%), Query Frame = 2 Query: 140 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAKNF 436 TDKIIAEYIWIGGSGMD+RSKARTL GPVSDPS+LPKWNYDGSSTGQAPGEDSEVI+YPQAIFKDPFRRGN+ILVMCDAYTPAGEPIPTNKR A AK F Sbjct: 16 TDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSELPKWNYDGSSTGQAPGEDSEVIIYPQAIFKDPFRRGNHILVMCDAYTPAGEPIPTNKRAAAAKIF 114 HSP 2 Score: 44.2838 bits (103), Expect = 2.246e-55 Identity = 19/30 (63.33%), Postives = 21/30 (70.00%), Query Frame = 3 Query: 429 KIFSHSQVVAEEPWYGIEQEYTLLHXDVKW 518 KIFS+ +V E WYGIEQEYTLL D W Sbjct: 112 KIFSNPEVEKEVTWYGIEQEYTLLQKDTNW 141
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA1_SOYBN (Glutamine synthetase cytosolic isozyme 1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.976e-55 Identity = 85/101 (84.16%), Postives = 93/101 (92.08%), Query Frame = 2 Query: 134 ESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAKNF 436 ++T+K+IAEYIWIGGSGMD+RSKARTLPGPVSDPS+LPKWNYDGSSTGQAPGEDSE I Y F+DPFRRGNNILV+CDAYTPAGEPIPTNKRHA AK F Sbjct: 14 DTTEKVIAEYIWIGGSGMDLRSKARTLPGPVSDPSELPKWNYDGSSTGQAPGEDSEAI-YTHKPFQDPFRRGNNILVICDAYTPAGEPIPTNKRHAAAKVF 113 HSP 2 Score: 54.6842 bits (130), Expect = 4.976e-55 Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 3 Query: 429 KIFSHSQVVAEEPWYGIEQEYTLLHXDVKW 518 K+FSH VVAE PWYGIEQEYTLL D++W Sbjct: 111 KVFSHPDVVAEVPWYGIEQEYTLLQKDIQW 140
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA1_ALNGL (Glutamine synthetase OS=Alnus glutinosa GN=GLN1 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.102e-54 Identity = 82/101 (81.19%), Postives = 89/101 (88.12%), Query Frame = 2 Query: 134 ESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAKNF 436 ++TDK+IAEYIWIGGSG D+RSKARTL GPV+ PSKLPKWNYDGSSTGQAPGEDSEVI + FKDPFRRGNNILV+CD YTPAGEPIPTNKRH AK F Sbjct: 14 DATDKVIAEYIWIGGSGTDLRSKARTLTGPVNHPSKLPKWNYDGSSTGQAPGEDSEVIYILRQFFKDPFRRGNNILVICDTYTPAGEPIPTNKRHGAAKIF 114 HSP 2 Score: 57.7658 bits (138), Expect = 1.102e-54 Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 429 KIFSHSQVVAEEPWYGIEQEYTLLHXDVKW 518 KIFSH +VVAE PWYGIEQEYTLL DVKW Sbjct: 112 KIFSHPEVVAEVPWYGIEQEYTLLQKDVKW 141
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLN15_ARATH (Glutamine synthetase cytosolic isozyme 1-5 OS=Arabidopsis thaliana GN=GLN1-5 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.102e-54 Identity = 84/99 (84.85%), Postives = 90/99 (90.91%), Query Frame = 2 Query: 140 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAKNF 436 T KIIAEYIWIGGSGMD+RSKARTLPGPVS+P+KLPKWNYDGSST QA G+DSEVILYPQAIFKDPFR+GNNILVMCDAY PAG+PIPTN RH K F Sbjct: 16 TKKIIAEYIWIGGSGMDIRSKARTLPGPVSNPTKLPKWNYDGSSTDQAAGDDSEVILYPQAIFKDPFRKGNNILVMCDAYRPAGDPIPTNNRHKAVKIF 114 HSP 2 Score: 53.9138 bits (128), Expect = 1.102e-54 Identity = 23/30 (76.67%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 429 KIFSHSQVVAEEPWYGIEQEYTLLHXDVKW 518 KIF H V AEEPW+GIEQEYTLL DVKW Sbjct: 112 KIFDHPNVKAEEPWFGIEQEYTLLKKDVKW 141
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA1_MAIZE (Glutamine synthetase root isozyme 1 OS=Zea mays GN=GLN6 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.873e-54 Identity = 81/101 (80.20%), Postives = 94/101 (93.07%), Query Frame = 2 Query: 134 ESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAKNF 436 + TD+IIAEYIWIGG+G+D+RSKART+ GP++DP +LPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFR+GN+ILVMCD YTP GEPIPTNKR++ AK F Sbjct: 14 DCTDRIIAEYIWIGGTGIDLRSKARTVKGPITDPIQLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRKGNHILVMCDCYTPQGEPIPTNKRYSAAKVF 114 HSP 2 Score: 53.1434 bits (126), Expect = 1.873e-54 Identity = 22/30 (73.33%), Postives = 23/30 (76.67%), Query Frame = 3 Query: 429 KIFSHSQVVAEEPWYGIEQEYTLLHXDVKW 518 K+FSH V AE PWYGIEQEYTLL DV W Sbjct: 112 KVFSHPDVAAEVPWYGIEQEYTLLQKDVSW 141
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA5_MAIZE (Glutamine synthetase root isozyme 5 OS=Zea mays GN=GS1-5 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 4.150e-54 Identity = 82/101 (81.19%), Postives = 93/101 (92.08%), Query Frame = 2 Query: 134 ESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAKNF 436 + TDKIIAEYIW+GGSG+D+RSKART+ GP++DPS+LPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFR+GNNILVMCD YTP GEPIP+NKR+ A F Sbjct: 14 DCTDKIIAEYIWVGGSGIDLRSKARTVKGPITDPSQLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPQGEPIPSNKRYKAATVF 114 HSP 2 Score: 50.447 bits (119), Expect = 4.150e-54 Identity = 21/36 (58.33%), Postives = 24/36 (66.67%), Query Frame = 3 Query: 411 KDMRLPKIFSHSQVVAEEPWYGIEQEYTLLHXDVKW 518 K + +FSH V AE PWYGIEQEYTLL D+ W Sbjct: 106 KRYKAATVFSHPDVAAEVPWYGIEQEYTLLQKDLSW 141
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA2_MAIZE (Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 7.665e-53 Identity = 80/99 (80.81%), Postives = 88/99 (88.89%), Query Frame = 2 Query: 140 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAKNF 436 T KIIAEYIW+GGSGMD+RSKARTL GPV DPSKLPKWN+DGSSTGQAPG+DSEVIL P+AIF+DPFR+G NILVMCD Y P GEPIP+NKRH AK F Sbjct: 16 TGKIIAEYIWVGGSGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQAPGDDSEVILCPRAIFRDPFRKGQNILVMCDCYEPNGEPIPSNKRHGAAKIF 114 HSP 2 Score: 54.299 bits (129), Expect = 7.665e-53 Identity = 23/30 (76.67%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 429 KIFSHSQVVAEEPWYGIEQEYTLLHXDVKW 518 KIFSH V AEEPW+GIEQEYTLL D KW Sbjct: 112 KIFSHPDVKAEEPWFGIEQEYTLLQKDTKW 141
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLN13_ORYSJ (Glutamine synthetase cytosolic isozyme 1-3 OS=Oryza sativa subsp. japonica GN=GLN1-3 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.902e-52 Identity = 79/101 (78.22%), Postives = 90/101 (89.11%), Query Frame = 2 Query: 134 ESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAKNF 436 ESTDK+IAEYIW+GG+GMD+RSKARTL GPV DPSKLPKWN+DGSSTGQA G+DSEVIL+PQAIF+DPFR+G NILVMCD Y P GEPIPTN R+ A+ F Sbjct: 16 ESTDKVIAEYIWVGGTGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQATGDDSEVILHPQAIFRDPFRKGKNILVMCDCYAPNGEPIPTNNRYNAARIF 116 HSP 2 Score: 51.2174 bits (121), Expect = 4.902e-52 Identity = 21/30 (70.00%), Postives = 23/30 (76.67%), Query Frame = 3 Query: 429 KIFSHSQVVAEEPWYGIEQEYTLLHXDVKW 518 +IFSH V AEEPWYGIEQEYTLL + W Sbjct: 114 RIFSHPDVKAEEPWYGIEQEYTLLQKHINW 143
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLN14_ARATH (Glutamine synthetase cytosolic isozyme 1-4 OS=Arabidopsis thaliana GN=GLN1-4 PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.532e-51 Identity = 96/115 (83.48%), Postives = 104/115 (90.43%), Query Frame = 2 Query: 134 ESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAKNFQPFSSCG*RTMVWY 478 +STD+IIAEYIWIGGSG+DMRSKARTLPGPV+DPS+LPKWNYDGSSTGQAPG+DSEVI+YPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHA AK F+ S T WY Sbjct: 14 DSTDQIIAEYIWIGGSGLDMRSKARTLPGPVTDPSQLPKWNYDGSSTGQAPGDDSEVIIYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFEDPSVVAEET--WY 126
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA2_HORVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Hordeum vulgare PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.842e-51 Identity = 82/99 (82.83%), Postives = 90/99 (90.91%), Query Frame = 2 Query: 140 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAKNF 436 TDKIIAEYIW+GGSG+D+RSK+RT+ PV DPS+LPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFR GNNILV+CD YTP GEPIPTNKRH A+ F Sbjct: 78 TDKIIAEYIWVGGSGIDLRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPQGEPIPTNKRHMAAQIF 176 HSP 2 Score: 44.2838 bits (103), Expect = 1.842e-51 Identity = 17/30 (56.67%), Postives = 23/30 (76.67%), Query Frame = 3 Query: 429 KIFSHSQVVAEEPWYGIEQEYTLLHXDVKW 518 +IFS +V ++ PW+GIEQEYTL+ DV W Sbjct: 174 QIFSDPKVTSQVPWFGIEQEYTLMQRDVNW 203 The following BLAST results are available for this feature:
BLAST of FC930940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930940 ID=FC930940; Name=FC930940; organism=Citrus clementina; type=EST; length=518bpback to top |