FC930946

Overview
NameFC930946
Unique NameFC930946
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930946 vs. ExPASy Swiss-Prot
Match: MCFR_DICDI (Mitochondrial substrate carrier family protein R OS=Dictyostelium discoideum GN=mcfR PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 3 
Query:  357 IDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR 647
            +  L GGVS  ++K+  AP+ERVK+L Q + +M         +  +    K  +K+EG+  LW+GNTA ++R FP  A+ +   DY K   NF  D+
Sbjct:   13 VTLLAGGVSGVIAKSTIAPLERVKILYQVKSKMYS-------FNSVYGLMKNIIKNEGLAGLWKGNTATILRIFPYSAIQWTSYDYLKN--NFVTDK 100
The following BLAST results are available for this feature:
BLAST of FC930946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
MCFR_DICDI1.588e-1136.08Mitochondrial substrate carrier family protein R O... [more]

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Properties
Property NameValue
Genbank descriptionC34110G03EF PostHarvP1 Citrus clementina cDNA clone C34110G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930946 ID=FC930946; Name=FC930946; organism=Citrus clementina; type=EST; length=678bp
GAAAATATCTCTGCTTCTCTCGCTTTTCGCACGCCTTTCCTTTCTAAGCA
GAGCGGGAGGCGGACACCAATCTGTCATTTTTCAAAGGAAAAGTCACAAT
GATTGATCAGGTTCAACATCCTTCCGTCATGCAGAAGGTAGCTGGACAGC
TCCTTCATTCCAGCCTTTCCCAAAATATTCAGGATTATGAAAGGCCAACC
ATGTACCAAAGACGTGGTGCTTATGGGAACTACTCCAATGCTGCATTCCA
ATACCCCATAGTCAGTGCAGCTACAACCGATCTATCTATGGTGCCGTCAA
CTGCATCTGCTATTTGCGTCCAAGCCCCAGCTGAGAAAGGCTTTGCAGGC
TTTGCTATCGATTTCCTTATGGGTGGAGTTTCTGCTGCTGTGTCCAAAAC
AGCTGCTGCTCCCATTGAGCGTGTTAAGCTTTTGATTCAAAACCAAGATG
AGATGATCAAGAGTGGTAGGCTATCTGAACCCTACAAGGGCATTGGTGAT
TGTTTTAAGCGTACAATGAAGGATGAGGGTATTGTTGCTTTGTGGAGAGG
AAATACCGCTAATGTTATCCGTTACTTCCCCACTCAGGCCCTGAACTTTG
CATTCAAGGATTACTTCAAGAGGCTCTTCAACTTCAAGAAAGACAGGGAT
GGTTACTGGAAATGGTTTGCTGGTAATT
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