FC930952

Overview
NameFC930952
Unique NameFC930952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK4_PLABA (Calcium-dependent protein kinase 4 OS=Plasmodium berghei (strain Anka) GN=CPK4 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.383e-26
Identity = 83/255 (32.55%), Postives = 125/255 (49.02%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI----CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSE-EEIAGLKEMFKAMDTDNSGAITFDELKAG----LRRYGSTLKD-------TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL SG PPF    +  I   V  G   F+   +  ISD AKDLI+KML    + R++A + L H WI     ++ V  D       ++ +KQF +  KL + AL  +   L+  +E   L ++FK MD +  G +  +EL  G    L+  G    D        E+  ++ + D+D +G I+Y EF+   +    L   E L  AF+ FDKDGSG I+ +EL Q     +++      +++EV    DG ID
Sbjct:  260 LYILLSGCPPFNGSNEYDILKKVETGKYTFDLPQFKKISDKAKDLIKKMLMYTSAVRISARDALEHEWIRLMTSKDNVNIDIPSLELSITNIKQFQSTQKLAQAALLYMGSKLTTIDETKELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGDDTTDLDNAAIEVEVDQILSSIDLDQNGYIEYSEFLTVAIDRKLLLSTERLEKAFKLFDKDGSGKISANELAQLFGLGDVSSDCWKTVLKEVDQNNDGEID 514          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAFK (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24
Identity = 81/251 (32.27%), Postives = 122/251 (48.61%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI---CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSE-EEIAGLKEMFKAMDTDNSGAITFDELKAG---LRRYGSTL-----KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL  G PPF  +  Q I   V KG   F+ + W  IS+ AK+LI+ ML    ++R+TA E L   WI     N    D+      LS +++F    KL + A+  I   L+  EE   L ++FK +D +  G +   EL  G   LR + + L      + E+ +++   D D +G I+Y EFI+  +    L  EE L  AF  FD D SG IT +EL       ++++ +  +++ E     D  ID
Sbjct:  257 LYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISEEAKELIKLMLTYDYNKRITAKEALNSKWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNILRSFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRDAFNLFDTDKSGKITKEELANLFGLTSISEQMWNEVLGEADKNKDNMID 507          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAF7 (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate 3D7) GN=CPK1 PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24
Identity = 81/251 (32.27%), Postives = 122/251 (48.61%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI---CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSE-EEIAGLKEMFKAMDTDNSGAITFDELKAG---LRRYGSTL-----KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL  G PPF  +  Q I   V KG   F+ + W  IS+ AK+LI+ ML    ++R+TA E L   WI     N    D+      LS +++F    KL + A+  I   L+  EE   L ++FK +D +  G +   EL  G   LR + + L      + E+ +++   D D +G I+Y EFI+  +    L  EE L  AF  FD D SG IT +EL       ++++ +  +++ E     D  ID
Sbjct:  257 LYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISEEAKELIKLMLTYDYNKRITAKEALNSKWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNILRSFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRDAFNLFDTDKSGKITKEELANLFGLTSISEQMWNEVLGEADKNKDNMID 507          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAYO (Calcium-dependent protein kinase 1 OS=Plasmodium yoelii yoelii GN=CPK1 PE=3 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23
Identity = 77/221 (34.84%), Postives = 109/221 (49.32%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI---CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSE-EEIAGLKEMFKAMDTDNSGAITFDELKAG---LRRYGSTL-----KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDEL 627
            +YIL  G PPF  +  Q I   V KG   F+ + W  ISD AK+LI+ ML    ++R TA E L   WI     N    D+      LS +++F    KL + A+  I   L+  EE   L ++FK +D +  G +   EL  G   LR + + L      + E+ +++   D D +G I+Y EFI+  +    L  EE L  AF  FD D SG IT +EL
Sbjct:  256 MYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEEL 476          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CCAMK_PEA (Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase (Fragment) OS=Pisum sativum GN=SYM9 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23
Identity = 74/228 (32.46%), Postives = 111/228 (48.68%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAES-----------------LSEEEIAGLKEMFKAM--DTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDEL 627
            LYIL SG PPF A+  +     +L G+  F    W  IS SAK+LI  +L   P++R +A E+L  PW+ +   A D  +DP ++SRL++F+A  KL+  A+  +  S                 L E+EI  L+  FK +  D DN+    F+E+   ++          I DL D    +  GT+D  E +     L   + E+ L   FQ +D D SG IT +E+
Sbjct:  246 LYILLSGYPPFIAQNNRQKQQMILNGNFSFYEKTWKGISQSAKNLISSLLTVDPAKRPSAQELLSDPWV-KGEKAKDDQMDPEIVSRLQRFNARRKLRAAAIASVWSSTIFLRTKKLKSLVGSYDLKEDEIENLRMHFKKICADRDNATLCEFEEVLKAMKMPSLIPFAARIFDLFDN---NRDGTVDMREILCGFSSLKNSKGEDALRLCFQMYDTDRSGCITKEEV 469          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CCAMK_LILLO (Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase OS=Lilium longiflorum GN=CCAMK PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22
Identity = 71/228 (31.14%), Postives = 110/228 (48.25%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAES-----------------LSEEEIAGLKEMFKAM--DTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDEL 627
            LYIL SG PPF A + +     +L G   FE   W  I+ SAKDLI  +L   P +R TA+++L HPW+  +  A    ++P V+SRL+ F+A  KL+  A+  +  S                 +  EE+  L+  FK +  + DN+    F+E+   ++          + DL D    +  GTID  E +    +L   + ++ L   FQ +D D SG I+ +EL
Sbjct:  234 LYILLSGCPPFHAPSNREKQQRILAGDFSFEEHTWKTITSSAKDLISSLLSVDPYKRPTANDLLKHPWVIGDS-AKQELIEPEVVSRLRSFNARRKLRAAAIASVLSSKVLLRTKKLKNLLGSHDMKSEELENLRAHFKRICANGDNATLPEFEEVLKAMKMNSLIPLAPRVFDLFDN---NRDGTIDMREILCGLSNLRNSQGDDALQLCFQMYDADRSGCISKEEL 457          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CCAMK_MEDTR (Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 OS=Medicago truncatula GN=DMI3 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21
Identity = 73/228 (32.02%), Postives = 109/228 (47.81%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAES-----------------LSEEEIAGLKEMFKAM--DTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDEL 627
            LYIL SG PPF A+  +     ++ G+  F    W  IS  AK+LI  +L   PS+R +A E+L  PW+ +   A D  +DP ++SRL+ F+A  KL+  A+  +  S                 L EEEI  L+  FK +  D DN+    F+E+   +         + I DL D    +  GT+D  E +     L   + E+ L   FQ +D D SG I+ +E+
Sbjct:  238 LYILLSGYPPFIAQNNRQKQQMIMNGNFSFYEKTWKGISQPAKNLISSLLTVDPSKRPSALELLSDPWV-KGEKAKDVQMDPEIVSRLQSFNARRKLRAAAIASVWSSTIFLRTKKLKSLVGSYDLKEEEIENLRMHFKKICADRDNATLSEFEEVLKAMNMLSLIPFASRIFDLFDN---NRDGTVDMREILCGFSSLKNSKGEDALRLCFQMYDTDRSGCISKEEV 461          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_PLAFA (Calmodulin OS=Plasmodium falciparum PE=3 SV=4)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 51/138 (36.96%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+I+  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      L   + EE L+ AF+ FD+DG GYI+ DEL+         +T+  + ++IRE  I  DG+I+
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQIN 138          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_PLAF7 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 51/138 (36.96%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+I+  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      L   + EE L+ AF+ FD+DG GYI+ DEL+         +T+  + ++IRE  I  DG+I+
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQIN 138          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_PROMN (Calmodulin OS=Prorocentrum minimum PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18
Identity = 49/138 (35.51%), Postives = 80/138 (57.97%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF++     +   + EE L+ AF+ FD+DG+G+I+  EL+         +TD  + ++IRE  +  DG+I+
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138          
The following BLAST results are available for this feature:
BLAST of FC930952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
CDPK4_PLABA7.383e-2632.55Calcium-dependent protein kinase 4 OS=Plasmodium b... [more]
CDPK1_PLAFK5.291e-2432.27Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]
CDPK1_PLAF75.291e-2432.27Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]
CDPK1_PLAYO2.011e-2334.84Calcium-dependent protein kinase 1 OS=Plasmodium y... [more]
CCAMK_PEA9.978e-2332.46Calcium and calcium/calmodulin-dependent serine/th... [more]
CCAMK_LILLO2.223e-2231.14Calcium and calcium/calmodulin-dependent serine/th... [more]
CCAMK_MEDTR1.441e-2132.02Calcium and calcium/calmodulin-dependent serine/th... [more]
CALM_PLAFA8.741e-1936.96Calmodulin OS=Plasmodium falciparum PE=3 SV=4[more]
CALM_PLAF78.741e-1936.96Calmodulin OS=Plasmodium falciparum (isolate 3D7) ... [more]
CALM_PROMN2.543e-1835.51Calmodulin OS=Prorocentrum minimum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34110G09EF PostHarvP1 Citrus clementina cDNA clone C34110G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930952 ID=FC930952; Name=FC930952; organism=Citrus clementina; type=EST; length=718bp
CTGTATATATTGCCTAGTGGAGTGCCACCATTTTGGGCAGAAACACAACA
GGGAATATTTGATGCGGTGTTGAAGGGACACATTGACTTTGAGTCTGACC
CTTGGCCACTAATATCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTA
TGCTCTCAACCATCAGAACGCCTGACTGCTCATGAAGTTTTATGTCATCC
CTGGATCTGTGAAAATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTG
TACTTTCTCGTCTCAAACAATTCTCTGCAATGAATAAATTGAAAAAGATG
GCTTTACGGGTTATAGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTT
AAAGGAAATGTTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACAT
TTGATGAACTCAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGAT
ACAGAGATACGTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAAC
TATTGATTATGGAGAATTTATAGCTGCAACTGTTCACCTCAATAAATTAG
AACGTGAGGAACATCTTGTTGCTGCATTCCAGTACTTCGACAAGGATGGA
AGTGGTTATATTACGGTTGATGAACTTCAGCAAGCATGTGCTGAACATAA
CATGACAGATGTTTTACTTTGAGATATAATCAGAGAAGTTTTGATCAGAT
ATGATGGAAGAATTGACT
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