FC930952

Overview
NameFC930952
Unique NameFC930952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_SHEEP (Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1 
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  + ++IRE  I  DG+++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_RAT (Calmodulin OS=Rattus norvegicus GN=Calm1 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1 
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  + ++IRE  I  DG+++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_RABIT (Calmodulin OS=Oryctolagus cuniculus GN=CALM PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1 
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  + ++IRE  I  DG+++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 50/138 (36.23%), Postives = 79/138 (57.25%), Query Frame = 1 
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE ++ AF+ FDKDG+G+I+  EL+         +TD  + ++IRE  I  DG+I+
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQIN 138
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_PONAB (Calmodulin OS=Pongo abelii GN=CALM PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1 
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  + ++IRE  I  DG+++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_PLEOS (Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1 
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ LSEE+I+  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  + ++IRE  +  DG+I+
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADVDGDGQIN 138
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 50/138 (36.23%), Postives = 79/138 (57.25%), Query Frame = 1 
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE ++ AF+ FDKDG+G+I+  EL+         +TD  + ++IRE  I  DG+I+
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQIN 138
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_PERFV (Calmodulin OS=Perca flavescens GN=calm PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1 
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  + ++IRE  I  DG+++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_PARTE (Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 51/138 (36.96%), Postives = 79/138 (57.25%), Query Frame = 1 
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +AE L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF++     + + + EE L+ AF+ FD+DG+G I+  EL+         +TD  + ++IRE  I  DG I+
Sbjct:    1 MAEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 138
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_ONCSP (Calmodulin OS=Oncorhynchus sp. GN=calm PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1 
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  + ++IRE  I  DG+++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138
The following BLAST results are available for this feature:
BLAST of FC930952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
CALM_SHEEP4.338e-1836.23Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3[more]
CALM_RAT4.338e-1836.23Calmodulin OS=Rattus norvegicus GN=Calm1 PE=1 SV=2[more]
CALM_RABIT4.338e-1836.23Calmodulin OS=Oryctolagus cuniculus GN=CALM PE=1 S... [more]
CALM_PYTSP4.338e-1836.23Calmodulin OS=Pythium splendens PE=2 SV=1[more]
CALM_PONAB4.338e-1836.23Calmodulin OS=Pongo abelii GN=CALM PE=2 SV=3[more]
CALM_PLEOS4.338e-1836.23Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=... [more]
CALM_PHYIN4.338e-1836.23Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ... [more]
CALM_PERFV4.338e-1836.23Calmodulin OS=Perca flavescens GN=calm PE=2 SV=3[more]
CALM_PARTE4.338e-1836.96Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 S... [more]
CALM_ONCSP4.338e-1836.23Calmodulin OS=Oncorhynchus sp. GN=calm PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34110G09EF PostHarvP1 Citrus clementina cDNA clone C34110G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930952 ID=FC930952; Name=FC930952; organism=Citrus clementina; type=EST; length=718bp
CTGTATATATTGCCTAGTGGAGTGCCACCATTTTGGGCAGAAACACAACA
GGGAATATTTGATGCGGTGTTGAAGGGACACATTGACTTTGAGTCTGACC
CTTGGCCACTAATATCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTA
TGCTCTCAACCATCAGAACGCCTGACTGCTCATGAAGTTTTATGTCATCC
CTGGATCTGTGAAAATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTG
TACTTTCTCGTCTCAAACAATTCTCTGCAATGAATAAATTGAAAAAGATG
GCTTTACGGGTTATAGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTT
AAAGGAAATGTTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACAT
TTGATGAACTCAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGAT
ACAGAGATACGTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAAC
TATTGATTATGGAGAATTTATAGCTGCAACTGTTCACCTCAATAAATTAG
AACGTGAGGAACATCTTGTTGCTGCATTCCAGTACTTCGACAAGGATGGA
AGTGGTTATATTACGGTTGATGAACTTCAGCAAGCATGTGCTGAACATAA
CATGACAGATGTTTTACTTTGAGATATAATCAGAGAAGTTTTGATCAGAT
ATGATGGAAGAATTGACT
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