FC930960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930960 vs. ExPASy Swiss-Prot
Match: RS4E_HALSA (30S ribosomal protein S4e OS=Halobacterium salinarium GN=rps4e PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11 Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 2 Query: 50 HQKRLSAPSHWLLGKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLVKVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHD 457 HQKRLS P W + + + T+ KA GPH +PL+V +R+ L+Y + E + + V V+G D P G D+++ E++R+ D GR + I A+ A KL KV GG L HD Sbjct: 4 HQKRLSVPKSWPVERKTETFTAKAGAGPHG-ESGVPLVVVLRDVLEYVDDTSEAQYAINTDGVLVNGDSVGDVNRPIGMFDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDKTTVSGGRTQLNFHD 138
BLAST of FC930960 vs. ExPASy Swiss-Prot
Match: RS4E_HALS3 (30S ribosomal protein S4e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps4e PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11 Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 2 Query: 50 HQKRLSAPSHWLLGKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLVKVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHD 457 HQKRLS P W + + + T+ KA GPH +PL+V +R+ L+Y + E + + V V+G D P G D+++ E++R+ D GR + I A+ A KL KV GG L HD Sbjct: 4 HQKRLSVPKSWPVERKTETFTAKAGAGPHG-ESGVPLVVVLRDVLEYVDDTSEAQYAINTDGVLVNGDSVGDVNRPIGMFDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDKTTVSGGRTQLNFHD 138
BLAST of FC930960 vs. ExPASy Swiss-Prot
Match: RS4E_PICTO (30S ribosomal protein S4e OS=Picrophilus torridus GN=rps4e PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11 Identity = 44/137 (32.12%), Postives = 67/137 (48.91%), Query Frame = 2 Query: 56 KRLSAPSHWLLGKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLVKVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDART 466 K + AP + + S +A + PG HK +PL++ +R+ LK RE+ I+ LV VDGKV + GFMD +++ +G + + YD KG+ + E KL +VK KGG + HD T Sbjct: 6 KIMMAPRKLKIARKSRFWAVNSLPGSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSLVMVDGKVVKERRRGIGFMDTLTV--SGNDYLVSYDRKGKLVILPKPGETKGLKLLRVKGKTYVKGGRIQISFHDGST 140 The following BLAST results are available for this feature:
BLAST of FC930960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930960 ID=FC930960; Name=FC930960; organism=Citrus clementina; type=EST; length=712bpback to top |