FC930962

Overview
NameFC930962
Unique NameFC930962
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length766
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15241 contig Ccv1_Contig15241:1..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.404e-65
Identity = 128/187 (68.45%), Postives = 154/187 (82.35%), Query Frame = 2
Query:  152 LLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKA-HSVVDV 709
            L AMQL  ASVLPMVLKSAIELDLLEII   G D  MSP +IAS LPT NPDA  ++DRILRLL+ YSV+ CS+R++ D   +R+YGLAPVCK+LTKN+DGV+++ LCLMNQDKVLMESWY+LKDAVL+GGIPFNKA+GM++F+YHG D RFNK+FN GMS HSTITMKK  +  +G +   S+VDV
Sbjct:    2 LFAMQLACASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDD---QRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDV 183          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.815e-60
Identity = 122/215 (56.74%), Postives = 156/215 (72.56%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKA------GPDAFMSPKDIASQLPTK-NPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKAHS-VVDV 709
            MGST+++     A  +DEEA + A+QL S+S+LPM LK+AIEL LLE +  A      G  A ++P ++A +LP+K NP A  ++DR+LRLLASY+V+ C +    DGK+ R Y  APVCK+LT NEDGV+++ L LMNQDKVLMESWYYLKDAVL+GGIPFNKA+GM AF+YHG D RFN++FN GM +HS I  KK L +  G  A S VVDV
Sbjct:    1 MGSTAADM----AAAADEEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDV 211          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.985e-57
Identity = 119/211 (56.40%), Postives = 155/211 (73.46%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEII-AKAGPDAFMSPKDIASQLPTK--NPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKAHS-VVDV 709
            MGST+ +     A  +DEEA + AMQL SAS+LPM LK+A+EL LLE++ A+A     ++P+++ ++LP    NPDA  ++DR+LRLLASY V+ C + +  DGK ER Y  APV K+LT NEDGV+++ L LMNQDKVLMESWYYLKDAVL+GGIPFNKA+GM AF+YHG D RFN++FN GM +HS I  KK L+   G +  S +VDV
Sbjct:    1 MGSTAEDV----AAVADEEACMYAMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMED-KDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDV 206          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.466e-56
Identity = 117/213 (54.93%), Postives = 152/213 (71.36%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAK--AGPDAFMSPKDIASQLPTKNPD---AHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKAHS-VVDV 709
            MGST+ +     A   DEEA + AMQL S+S+LPM LK+AIEL LLE++ K   G  A ++P+++ +++P    D   A  ++DR+LRLLASY V+ C + +  DG+ ER Y  APVCK+LT NEDGV+++ L LMNQDKVLMESWYYLKDAVL+GGIPFNKA+GM AF+YHG D RFN++FN GM +HS I  KK L    G +  S +VDV
Sbjct:    1 MGSTAGDV----AAVVDEEACMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDR-DGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDV 208          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.553e-47
Identity = 95/192 (49.48%), Postives = 132/192 (68.75%), Query Frame = 2
Query:  137 DEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKAHSV-VDV 709
            DE+   LA+ L +A+  PM+LKSA EL +L+I +KAG   F+S  +IASQ+  KNP+A ++LDR+LRLLAS+SVL C L+   +G  +R+YG AP+C +L  N+   +L  L +++ DKV+MESW++L D +LEGG+PF +AHGM  FDY G D RFN +FN GM+ H+ + MKK L    G     V VDV
Sbjct:   18 DEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQK-GEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDV 208          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.514e-35
Identity = 85/188 (45.21%), Postives = 119/188 (63.30%), Query Frame = 2
Query:  152 LLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGG-IPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGL-KAHSVVDV 709
            L  + L+    LPM L++AIEL++ EII++AGPDA +SP DI +++PTKNP A I LDRILR+L + S+L+ S       K  R+YGL    + L  +ED V++  + L   DK ++ES+Y +KD VLE G IPF++ HGM+ F Y GK+ R NK FN  M + STI   +  K+ KG      +VDV
Sbjct:   40 LSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPSAAISLDRILRMLGASSILSVSTT-----KSGRVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDV 222          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31
Identity = 89/210 (42.38%), Postives = 126/210 (60.00%), Query Frame = 2
Query:   98 TSSETQISP-AQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPD-AFMSPKDIASQLP--TKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIP-FNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKAHS-VVDV 709
            T  + QIS  ++ +++ A L AM LT+  V P VL +AI+L+L EIIAKA P  AFMSP +IAS+LP  T++ D    LDR+LRLLASYSVL  + R + DG  ER+YGL+ V K+L  +E    L+          L++ W   K+AV++  I  F   HG+  +++ GKD + N+IFN  M       MK+ L+I  G +  S +VDV
Sbjct:    7 TKEDNQISATSEQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDV 216          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.779e-13
Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 2
Query:  191 MVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTK--NPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVL-EGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLK 670
            +VLK A++LDL  II  +G    +S  +++S+LP++  N DA   L R++R L    +     +   DG++   YGLAP  K+L K  D   +  + L   DK  M  W+YLKD +  E G  F KA G N + Y  +    N++FN  M++ S + M   +K
Sbjct:   25 LVLKCAVQLDLANIIHNSGTSMTLS--ELSSRLPSQPVNEDA---LYRVMRYLVHMKLFT---KASIDGELR--YGLAPPAKYLVKGWDKCMVGSI-LAITDKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVK 176          
The following BLAST results are available for this feature:
BLAST of FC930962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
OMT2_CHRAE1.404e-6568.45Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_ORYSJ8.815e-6056.74Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_SACOF6.985e-5756.40Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_MAIZE3.466e-5654.93Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
IMT1_MESCR6.553e-4749.48Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
SMT_COPJA1.514e-3545.21(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA1.016e-3142.38Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
6OMT_COPJA2.779e-1334.36(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]

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Properties
Property NameValue
Genbank descriptionC34110H08EF PostHarvP1 Citrus clementina cDNA clone C34110H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930962 ID=FC930962; Name=FC930962; organism=Citrus clementina; type=EST; length=766bp
GACTCCGTGCCATTACTCAAATTGAAGGCTTCATTAATTTCTCTTCCCCG
AAAAAAGAAGGAAAAGAGGGAGAAAAAAAAAGCACAAAATGGGTTCAACC
AGTTCAGAAACTCAAATAAGTCCAGCCCAAGGCTCGGATGAAGAGGCAAA
CCTCTTGGCCATGCAATTAACCAGTGCCTCAGTCTTGCCTATGGTTCTCA
AATCAGCCATTGAGCTTGATCTTTTAGAGATCATCGCTAAAGCTGGGCCA
GATGCTTTCATGTCTCCAAAAGACATAGCTTCTCAGCTGCCCACAAAGAA
CCCAGATGCCCATATCGTGCTTGATCGTATATTGCGCCTTCTGGCGAGCT
ATTCAGTCCTTAATTGCTCTTTGCGCAATCTCCCCGACGGCAAAGTTGAG
AGGCTTTATGGCCTTGCCCCCGTTTGTAAATTCCTCACTAAAAATGAAGA
TGGTGTTACACTTTCCGATCTTTGTCTCATGAACCAAGACAAGGTTCTCA
TGGAGAGCTGGTACTACTTAAAAGATGCAGTGCTTGAAGGTGGCATTCCA
TTTAACAAGGCCCATGGGATGAATGCATTCGATTACCATGGCAAAGATCT
AAGATTCAACAAGATTTTCAACAATGGAATGTCTTCTCATTCTACCATTA
CCATGAAGAAATTCTTGAAAATTACAAAGGGTTTGAAGGCTCACTCAGTT
GTCGACGTGGTGGTGGAATGGAGCACACTTACATGATATCTCCAGTATCA
TCGATAAGGCATCACT
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