FC930963

Overview
NameFC930963
Unique NameFC930963
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIKB_SYNP2 (Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_A1281 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.232e-16
Identity = 61/212 (28.77%), Postives = 96/212 (45.28%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISR 636
            SM+G+LC  PE             +DEAH  G +G+ G GV E     T    I +GT +K+ GS GGY+AGSK LI +L+      +Y T +SP      ++AI ++  E       Q+  ++ EN    +S L   G   L  ++S V+   L NP +  A     L               +  +R R+ + A+H+ + +   +E+  R
Sbjct:  185 SMDGDLCLLPELLAIAKEFSTMLLVDEAHGTGVLGQKGAGVVEHFHC-TQQPLIQVGTLSKALGSLGGYVAGSKALIDFLRNRASTWIYTTGLSPADTAAALAAIHILQEE------PQRRQQLWENIRQLKSAL---GNHELVPSESAVLCFGLANPQQALAMGDRLLATG--FFAPAIRPPTVPTSRIRVSVMATHSPQQIQGFIEIFQR 384          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIKB_CYAP7 (Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase OS=Cyanothece sp. (strain PCC 7424) GN=PCC7424_4834 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.232e-16
Identity = 49/160 (30.63%), Postives = 84/160 (52.50%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAK 480
            SM+G++C  P+             +DEAH+ G +GKTG G  E L     ++ I MGT +K+ GS GGY+AGS +L+++L+      +Y T +SP      ++A+ +I  E       Q+  ++ EN    + +L   GF  L  +++P++ + L  P +
Sbjct:  182 SMDGDICPLPQLLDLAEDFNCMVLVDEAHATGVMGKTGAGCVEHLNCSGREL-IQMGTLSKALGSLGGYVAGSFQLVEFLRNRAATWIYTTGLSPGDTAAALTALNIIQAE------PQRRQQLWENVGLLKEQLS--GFN-LFPSETPIICLGLNTPTE 331          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_RALEH (8-amino-7-oxononanoate synthase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=bioF PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16
Identity = 54/214 (25.23%), Postives = 104/214 (48.60%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQK---LARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVIS 633
            SM+G +    +             +D+AH  G +G+ G GV E L + +  + I +GT  K+ G  G ++A  + +I++L  T   ++Y T+  P  A  +++++ +I GE+G+ R AQ    +  +RE      ++L  +    LGD+++ + P+++ +     A S                      AR RI +SA+HT++D+ + L+ +S
Sbjct:  187 SMDGNVAPLRKLLELAERHDAWIIVDDAHGFGVLGEQGHGVLEALGLSSERL-IYIGTLGKAAGVAGAFVAAHETIIEHLVNTARPYIYTTAAPPAVAHALLASLAIIEGEEGTQRRAQLTRCIGMLREG----LAQLAAIAGWTLGDSETAIQPLIVGDNGAALALSATLEADGIRVGAIRPPTVPEGTARLRITLSAAHTEDDVRRLLDALS 395          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_BACLD (8-amino-7-oxononanoate synthase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=bioF PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16
Identity = 57/214 (26.64%), Postives = 103/214 (48.13%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVG 642
            SM+G +    E             +D+AH+ G +G+ GRG  E   V     D+++GT +K+ G+ GG++AGSK LI +L       ++ T++ P +      A+ +I  ED  SR  ++L  ++ + N  +  L  +GF V G+ D+P++P+M+ +P K   F+     +                +R R+ ++A    +D+   LE    +G
Sbjct:  169 SMDGTIAPLDEIMLLAKQYRAFVIVDDAHATGVLGEAGRGTSEYFGVSP---DVVIGTLSKAVGAEGGFVAGSKTLIDFLLNHARTFIFQTAVPPASCAAACKALDII--ED--SRAKRRL--LQSSVNTIKRSLVDIGFTVNGE-DTPIIPVMIGDPQKAVQFANGLKEKGIEAPAIRPPTVAEGESRIRLTVTAERRLKDIEDLLEGFKLMG 372          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_AERHH (8-amino-7-oxononanoate synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=bioF PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16
Identity = 54/210 (25.71%), Postives = 96/210 (45.71%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVI 630
            SM+G+   + E             +D+AH +G +G  GRG      V  A V I MGTF K+ G  G ++ GS+EL+ YL      ++Y+T +    A  +  +I+++   D      +  A + +    FR   Q +G++ LG +D+P+ P+++         +                   +  AR RI +SA+H ++D+ + LE +
Sbjct:  181 SMDGDQGSWRELAALAAQSGNWLMIDDAHGLGVLGSEGRGTLAAQGVAPASVHIQMGTFGKALGVAGAFVGGSRELVDYLVNFARHYVYSTHMPAAQACAVSQSIELVRAAD------EARAHLGQLITRFRQGAQALGWQ-LGASDTPIQPLLVGESGAALQLAERLRECGVWAGAIRPPTVPVGTARLRITLSAAHREQDVDRLLEAL 383          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_THICR (8-amino-7-oxononanoate synthase OS=Thiomicrospira crunogena (strain XCL-2) GN=bioF PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15
Identity = 54/215 (25.12%), Postives = 98/215 (45.58%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGD 645
            SM+G+                   LD+AH  G +G+ G+G      +   +  I+MGT  K+FG+ G ++AGS+ L++ L      ++Y T++ P  A    +A+K +   D          +++ N   F++   ++G   L  +DS + PIML   A+   +S    ++                AR R+ +SA+HT E + K L+ +++  D
Sbjct:  183 SMDGDCAPLQTIQALAKTYQAWLFLDDAHGFGTLGEQGKGTLAHFNLTPDENTIIMGTLGKAFGASGAFVAGSEVLVETLIQMARPYIYTTAMPPINARVARTALKQVQQADAERE------QLKRNIQHFQTGANQLGL-TLWPSDSAIQPIMLGRSAQAIQWSEALKQKGLWVTAIRPPTVPKNTARLRVTLSAAHTAEHIEKLLQALAQCQD 390          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_PSEU2 (8-amino-7-oxononanoate synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=bioF PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15
Identity = 55/222 (24.77%), Postives = 106/222 (47.75%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVGINTS 666
            SM+G++   P              +D+AH  G +G  G G+ E   +   DV +++GT  KSFG+ G ++AGS+ELI+ L      ++Y TS  P  A   + +++++  E       + L R+ +    FR   +++G +++ D+ +P+ PIM+ +  +    S+    +                AR R+ +SA+H++ D+   L  + +   L+  + S
Sbjct:  176 SMDGDIADLPALARSAKAKGAWLMVDDAHGFGPLGANGAGIVEHFGLSMDDVPVLVGTLGKSFGTSGAFVAGSEELIETLIQFARPYIYTTSQPPALACATLKSLQLLRTEHWR---REHLTRLIQQ---FRRGAEQIGLQLM-DSFTPIQPIMIGDAGRALHLSQLLRERGLLVTAIRPPTVPAGSARLRVTLSAAHSEADVQLLLNTLEQCYPLLDASHS 390          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_PSEMY (8-amino-7-oxononanoate synthase OS=Pseudomonas mendocina (strain ymp) GN=bioF PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15
Identity = 56/212 (26.42%), Postives = 101/212 (47.64%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKL-ARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVIS 633
            SM+G+L   P              +D+AH  G +G TG G+ E   +   +V +++GT  K+FG+ G ++AGS+ELI+ L      ++Y TS  P  A   + +++++  E       Q+L AR       FR    ++G  ++ D+ +P+ PI++ + A+    S     +                AR R+ +SA+H++  L   LE ++
Sbjct:  176 SMDGDLADLPVLCAEARARDAWVMVDDAHGFGPLGATGGGIVEHFGLGLDEVQVLVGTLGKAFGTAGAFVAGSEELIETLIQFARPYIYTTSQPPAVACATLKSLELLRREGWRREHLQRLIAR-------FRQGAAEIGLSLM-DSPTPIQPILVGDSARALKLSALLKDRGLLVGAIRPPTVPAGSARLRVTLSAAHSEAQLELLLEALA 379          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_CHRSD (8-amino-7-oxononanoate synthase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=bioF PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15
Identity = 57/208 (27.40%), Postives = 98/208 (47.12%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALE 624
            SM+G++ +                +D+AH +G +G+ G G C     D  +V +++GT  K+ GS G ++AG + LI +L      ++Y T+  P  A   ++A+ V+       R  ++ AR+ E S  FR E   +G   L D+ +P+ PI+L + A++  ++    R                 AR RI +SA+H  + L   LE
Sbjct:  176 SMDGDVAEVGALAATARRHGAWLMIDDAHGLGVLGEVGDG-CVGRAHDRREVPVLVGTLGKALGSAGAFVAGDEALIDHLIQFARPYVYTTAQPPGVAAATLTALDVL------EREPERRARLHERSADFRREAGTLGLP-LTDSRTPIQPIVLGDNARVMRWAERLARAGLRVGAIRAPTVPKGEARLRITLSATHDDDALDALLE 375          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_BACSH (8-amino-7-oxononanoate synthase OS=Bacillus sphaericus GN=bioF PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15
Identity = 51/219 (23.29%), Postives = 105/219 (47.95%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVGI 657
            SM+G++   P+             +D+AH+ G +G  G G  +   +   ++D  +GT +K+ G+ GG+++ S     YL     + ++ T++SP A E     I +I  E       ++  ++ +N+ + R +L++ GF V+ + ++P++ +++    +   FS + L +                +R RI + A+HT E L   +  I ++G  +GI
Sbjct:  178 SMDGDIAPLPKIVELAKEYKAYIMIDDAHATGVLGNDGCGTADYFGLKD-EIDFTVGTLSKAIGAEGGFVSTSSIAKNYLLNNARSFIFQTALSPSAIEAAREGISIIQNE------PERRKQLLKNAQYLRLKLEESGF-VMKEGETPIISLIIGGSHEAMQFSAKLLDEGVFIPAIRPPTVPKGSSRLRITVMATHTIEQLDMVISKIKKIGKEMGI 388          
The following BLAST results are available for this feature:
BLAST of FC930963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
BIKB_SYNP26.232e-1628.77Putative 8-amino-7-oxononanoate synthase/2-amino-3... [more]
BIKB_CYAP76.232e-1630.63Putative 8-amino-7-oxononanoate synthase/2-amino-3... [more]
BIOF_RALEH8.139e-1625.238-amino-7-oxononanoate synthase OS=Ralstonia eutro... [more]
BIOF_BACLD8.139e-1626.648-amino-7-oxononanoate synthase OS=Bacillus lichen... [more]
BIOF_AERHH8.139e-1625.718-amino-7-oxononanoate synthase OS=Aeromonas hydro... [more]
BIOF_THICR1.388e-1525.128-amino-7-oxononanoate synthase OS=Thiomicrospira ... [more]
BIOF_PSEU21.388e-1524.778-amino-7-oxononanoate synthase OS=Pseudomonas syr... [more]
BIOF_PSEMY1.388e-1526.428-amino-7-oxononanoate synthase OS=Pseudomonas men... [more]
BIOF_CHRSD1.388e-1527.408-amino-7-oxononanoate synthase OS=Chromohalobacte... [more]
BIOF_BACSH1.388e-1523.298-amino-7-oxononanoate synthase OS=Bacillus sphaer... [more]

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Properties
Property NameValue
Genbank descriptionC34110H09EF PostHarvP1 Citrus clementina cDNA clone C34110H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930963 ID=FC930963; Name=FC930963; organism=Citrus clementina; type=EST; length=677bp
AGCATGGAAGGGGAGCTTTGCAAATTTCCTGAGATTATTGCTATCTGCAA
AAAATATAAGGCATATATATACTTGGATGAGGCCCACAGTATCGGAGCAG
TGGGCAAAACCGGAAGAGGGGTTTGTGAGCTCTTAGAAGTTGATACTGCT
GATGTGGATATCATGATGGGAACTTTTACTAAATCATTTGGATCCTGTGG
TGGCTACATTGCAGGATCTAAGGAACTCATCCAATATTTGAAGTACACTT
GTCCTGCTCATCTTTACGCAACTTCAATTTCACCACCTGCTGCAGAACAA
ATAATATCTGCCATAAAGGTTATTCTCGGGGAGGATGGTTCCAGCAGAGG
TGCCCAGAAACTTGCACGCATTCGTGAGAATAGCAACTTTTTTAGGTCCG
AACTGCAAAAAATGGGGTTTGAGGTTCTTGGAGATAATGATTCTCCAGTG
ATGCCAATTATGCTTTACAATCCTGCCAAAATCCCTGCTTTCTCACGAGA
GTGCCTCAGGCAGAATGTGGCTGTTGTGACTGTTGCATTTCCTGCAACCC
CACTGCTATTGGCAAGGGCTCGAATCTGCATATCAGCATCGCATACCAAG
GAGGACCTGATTAAAGCCTTGGAGGTTATCAGTAGGGTTGGTGATCTTGT
GGGTATTAATACTTCCCAGCTGAACCT
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