FC930963

Overview
NameFC930963
Unique NameFC930963
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_CUPTR (8-amino-7-oxononanoate synthase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=bioF PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15
Identity = 56/211 (26.54%), Postives = 97/211 (45.97%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVIS 633
            SM+G +                  +D+AH  G +G+ G GV E L + +  + I +GT  K+ G  G ++A    +I++L  T   ++Y T+  P  A  +++++ +I G++G  R AQ LAR         ++L       LGD+ + V P+++ +     A S                      AR RI +SA+HT+ D+ + LE +S
Sbjct:  187 SMDGNVAPLRRLLELAERHDAWIVVDDAHGFGVLGEQGHGVLEALGLSSERL-IYIGTLGKAAGVAGAFVAAHATIIEHLVNTARPYIYTTAAPPAVAHALLASLAIIEGDEGRQRRAQ-LARCIATLREGLAQLAASAGWTLGDSQTAVQPLIVGDNGAALALSAALEADGIRVGAIRPPTVPEGTARLRITLSAAHTEADVRRLLEALS 395          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIKB_CYAP8 (Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase OS=Cyanothece sp. (strain PCC 8801) GN=PCC8801_0067 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15
Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVM 453
            SM+G  C   +             +DEAH+ G +G+TG G+ E        + IM GT +K+ GS GGY+AGS+ LI +L+   P  +Y T +SP      + AIK++  E       Q+  ++ +N N+ + +L       L  +DSP++
Sbjct:  180 SMDGNACPLQKLLSLAADFDCMLLVDEAHATGVIGETGAGLVEHFGCSNQPL-IMTGTLSKALGSLGGYVAGSRMLIDFLRNRAPTWIYTTGLSPADTSAALEAIKIMQNE------PQRRKKLWDNVNYLKEKLCDFN---LFTSDSPIL 320          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_XANAC (8-amino-7-oxononanoate synthase OS=Xanthomonas axonopodis pv. citri GN=bioF PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.039e-15
Identity = 52/217 (23.96%), Postives = 98/217 (45.16%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLV 651
            SM+G++                  +D+AH +G +G  GRG      +  A+V + + T  K+ G  G  + G + L+++L  T   ++Y T++ P      ++A+++   +D       + AR+ E    FR   +K GFE++  +D+P+ P++    A + A S                      AR R+ +SA HT++ +   +E I +  D+V
Sbjct:  183 SMDGDVAPLRALSLVARMQQALFYVDDAHGVGVLGPQGRGCVADAGLGVAEVPLQLVTLGKALGGYGAVVVGEEALVRHLAETARPYIYTTALPPAQVAATLAAVRLARRDD------WRRARLVELIGAFRDGARKHGFELMA-SDTPIQPLLCGEEATVMAMSAALEHAGFMVGAIRPPTVPEGKARLRVTLSALHTQQQVQALIEAIVQARDVV 392          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_PSEPK (8-amino-7-oxononanoate synthase OS=Pseudomonas putida (strain KT2440) GN=bioF PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.039e-15
Identity = 54/211 (25.59%), Postives = 102/211 (48.34%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVIS 633
            SM+G+L   P              +D+AH +G +G  G G+ E   +   DV +++GT  K+ G+ G ++AGS+ LI+ L      ++Y TS  P  A   + +++++  E  + R     A IR+    FR   Q++G +++ D+ +P+ PI++ + A+    SR    +                AR R+ +SA+H++  +   L  ++
Sbjct:  176 SMDGDLADLPALANVARARGAWLMVDDAHGLGTLGAKGGGIVEHFGLGVDDVPVLIGTLGKACGTAGAFVAGSEALIEALVQFARPYIYTTSQPPALACATLKSLELLRRE--TWRREHLAALIRQ----FREGAQQLGLQLM-DSPTPIQPIVIGDSAQALRLSRLLRERGLLVTAIRPPTVPAGSARLRVTLSAAHSEAQVQLLLNALA 379          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: KBL_BOVIN (2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial OS=Bos taurus GN=GCAT PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15
Identity = 64/219 (29.22%), Postives = 101/219 (46.12%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVG 654
            SM+G++    E             +DE+H+ G +G TGRG  ELL V    V I+  T  K+  G+ GGY  G   L+  L+     +L++ S+ PPAA    S    +L E  +   +     +R     FRS+++  GF + G N  P+ P+ML +       + + L++                AR R+ ISA H++ED+ + +E    VG L G
Sbjct:  206 SMDGDIAPLQEICRLASQYGALVFVDESHATGFLGATGRGTDELLGV-MDQVTIINSTLGKALGGASGGYTTGPGALVSLLRQRARPYLFSNSL-PPAAVGCASKALDLLMESNAIVQSMAAKTLR-----FRSQMEAAGFTISGAN-HPICPVMLGDARLALNIADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEAFVEVGRLHG 416          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIOF_PSEU5 (8-amino-7-oxononanoate synthase OS=Pseudomonas stutzeri (strain A1501) GN=bioF PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15
Identity = 53/212 (25.00%), Postives = 99/212 (46.70%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKL-ARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVIS 633
            SM+G+L   P              +D+AH  G +G TG G+ E   +   +V +++GT  K+FG+ G ++AGS+ELI+ L      ++Y TS  P  A   + +++++  E        +L AR RE +        ++G  ++  + +P+ P+++ +  +    S     +                AR RI ++A+HT   L + LE ++
Sbjct:  176 SMDGDLADLPALCAEAKRHGAWVMVDDAHGFGPLGATGGGIAEHFGLGIDEVPVLVGTLGKAFGTAGAFVAGSEELIETLIQFARPYIYTTSQPPAVACATLKSLELLRSEGWRREHLNRLVARFREGA-------ARIGLTLMA-SPTPIQPVLVGSSERALRLSALLRERGILVGAIRPPTVPAGSARLRITLTAAHTDAQLERLLEALA 379          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIKB_BACCZ (Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase OS=Bacillus cereus (strain ZK / E33L) GN=BCE33L3873 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15
Identity = 54/213 (25.35%), Postives = 99/213 (46.48%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRV 639
            SM+G+     E             +DEAH+ G  G  G G+  + +     +DI MGTF+K+ G  G Y+ G    I+YL+    + ++ T++ P     +  AI+++  ED   R       +  N  +FRS+L++ GF + G++ + ++PI++ +      FS+                  +  +R R  +++ HT  DL  A+E I+ +
Sbjct:  182 SMDGDTAYLRELVQLKEKYGAIIIVDEAHASGIYGIGGAGLSHIEKDLAQKIDIHMGTFSKALGCYGAYLTGDAIYIEYLQNMMRSFIFTTALPPSTLGAVQKAIEIV-QEDHKRR-----ENLIANGEYFRSKLREAGFNI-GNSSTHIVPIVVGSNENTLRFSKRLQEAGIAAIAIRPPTVPVHSSRIRFAVTSEHTIADLKWAIERITHI 387          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: KBL_HUMAN (2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial OS=Homo sapiens GN=GCAT PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15
Identity = 61/219 (27.85%), Postives = 101/219 (46.12%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVG 654
            SM+G++    E             +DE H+ G +G TGRG  ELL V    V I+  T  K+  G+ GGY  G   L+  L+     +L++ S+ P        A+ +++   GS+   Q +A     +  FRS+++  GF + G +  P+ P+ML +       + + L++                AR R+ ISA H++ED+ + +E    VG L G
Sbjct:  206 SMDGDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTDELLGV-MDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCASKALDLLM---GSNTIVQSMA---AKTQRFRSKMEAAGFTISGAS-HPICPVMLGDARLASRMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEAFVEVGRLHG 416          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIKB_BORPA (Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase OS=Bordetella parapertussis GN=BPP1775 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15
Identity = 56/211 (26.54%), Postives = 94/211 (44.55%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVIS 633
            SM+G+    P              LDEAH+ G +G  G G+  L       VD+ MGTF+K  GS G Y+AGS+ L  YL   C   +Y T++ P     I +A+ ++       R  Q  A +  +    R+ L   G +  G + + ++P ++ +     A + E  R+                +R RI +SA+H + +L + +E ++
Sbjct:  187 SMDGDRADVPALAALAARHHTFLYLDEAHATGVLGPRGMGLAGLAP---GGVDLAMGTFSKGLGSFGAYVAGSRALCDYLVNACSGFIYTTALPPAVLGAIDAALDLV------PRLDQARAALLGHGERLRASLAAQGID-CGASSTQIVPAIVGDAGHALALAAELERRGLLAVAIRPPTVPAGTSRLRIALSAAHGETELDQLIEALA 387          
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIKB_BORBR (Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase OS=Bordetella bronchiseptica GN=BB3333 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15
Identity = 56/211 (26.54%), Postives = 94/211 (44.55%), Query Frame = 1
Query:    1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVIS 633
            SM+G+    P              LDEAH+ G +G  G G+  L       VD+ MGTF+K  GS G Y+AGS+ L  YL   C   +Y T++ P     I +A+ ++       R  Q  A +  +    R+ L   G +  G + + ++P ++ +     A + E  R+                +R RI +SA+H + +L + +E ++
Sbjct:  189 SMDGDRADVPALAALAARHHAFLYLDEAHATGVLGPRGMGLAGLAP---GGVDLAMGTFSKGLGSFGAYVAGSRALCDYLVNACSGFIYTTALPPAVLGAIDAALDLV------PRLDQARAALLGHGERLRASLAAQGID-CGASSTQIVPAIVGDAGHALALAAELERRGLLAVAIRPPTVPAGTSRLRIALSAAHGEAELDQLIEALA 389          
The following BLAST results are available for this feature:
BLAST of FC930963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
BIOF_CUPTR3.093e-1526.548-amino-7-oxononanoate synthase OS=Cupriavidus tai... [more]
BIKB_CYAP83.093e-1531.13Putative 8-amino-7-oxononanoate synthase/2-amino-3... [more]
BIOF_XANAC4.039e-1523.968-amino-7-oxononanoate synthase OS=Xanthomonas axo... [more]
BIOF_PSEPK4.039e-1525.598-amino-7-oxononanoate synthase OS=Pseudomonas put... [more]
KBL_BOVIN5.276e-1529.222-amino-3-ketobutyrate coenzyme A ligase, mitochon... [more]
BIOF_PSEU55.276e-1525.008-amino-7-oxononanoate synthase OS=Pseudomonas stu... [more]
BIKB_BACCZ5.276e-1525.35Putative 8-amino-7-oxononanoate synthase/2-amino-3... [more]
KBL_HUMAN6.890e-1527.852-amino-3-ketobutyrate coenzyme A ligase, mitochon... [more]
BIKB_BORPA6.890e-1526.54Putative 8-amino-7-oxononanoate synthase/2-amino-3... [more]
BIKB_BORBR6.890e-1526.54Putative 8-amino-7-oxononanoate synthase/2-amino-3... [more]

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Properties
Property NameValue
Genbank descriptionC34110H09EF PostHarvP1 Citrus clementina cDNA clone C34110H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930963 ID=FC930963; Name=FC930963; organism=Citrus clementina; type=EST; length=677bp
AGCATGGAAGGGGAGCTTTGCAAATTTCCTGAGATTATTGCTATCTGCAA
AAAATATAAGGCATATATATACTTGGATGAGGCCCACAGTATCGGAGCAG
TGGGCAAAACCGGAAGAGGGGTTTGTGAGCTCTTAGAAGTTGATACTGCT
GATGTGGATATCATGATGGGAACTTTTACTAAATCATTTGGATCCTGTGG
TGGCTACATTGCAGGATCTAAGGAACTCATCCAATATTTGAAGTACACTT
GTCCTGCTCATCTTTACGCAACTTCAATTTCACCACCTGCTGCAGAACAA
ATAATATCTGCCATAAAGGTTATTCTCGGGGAGGATGGTTCCAGCAGAGG
TGCCCAGAAACTTGCACGCATTCGTGAGAATAGCAACTTTTTTAGGTCCG
AACTGCAAAAAATGGGGTTTGAGGTTCTTGGAGATAATGATTCTCCAGTG
ATGCCAATTATGCTTTACAATCCTGCCAAAATCCCTGCTTTCTCACGAGA
GTGCCTCAGGCAGAATGTGGCTGTTGTGACTGTTGCATTTCCTGCAACCC
CACTGCTATTGGCAAGGGCTCGAATCTGCATATCAGCATCGCATACCAAG
GAGGACCTGATTAAAGCCTTGGAGGTTATCAGTAGGGTTGGTGATCTTGT
GGGTATTAATACTTCCCAGCTGAACCT
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