FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BACAH (Glutamyl-tRNA reductase OS=Bacillus thuringiensis (strain Al Hakam) GN=hemA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 67/208 (32.21%), Postives = 112/208 (53.85%), Query Frame = 1 Query: 4 QGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 Q V G + LFK I++ KR +ET I EL E + +L++GAGKMG+L +++L G K+ V+NR+ + + E+ G KPLSE+ +AD++ +ST + + K+ + VE G LF +DI+VPR++ + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE Sbjct: 129 QQVKATGTIFNELFKQVITLAKRAHSETTIGESAMSVSYAAVELGKKIFGELTDC--HVLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEIMAEKYMGHA---KPLSELQCALLEADILISSTGASDYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BACAC (Glutamyl-tRNA reductase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=hemA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 67/208 (32.21%), Postives = 112/208 (53.85%), Query Frame = 1 Query: 4 QGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 Q V G + LFK I++ KR +ET I EL E + +L++GAGKMG+L +++L G K+ V+NR+ + + E+ G KPLSE+ +AD++ +ST + + K+ + VE G LF +DI+VPR++ + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE Sbjct: 129 QQVKATGTIFNELFKQVITLAKRAHSETTIGESAMSVSYAAVELGKKIFGELTDC--HVLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEIMAEKYMGHA---KPLSELQCALLEADILISSTGASDYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BACAA (Glutamyl-tRNA reductase OS=Bacillus anthracis (strain A0248) GN=hemA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 67/208 (32.21%), Postives = 112/208 (53.85%), Query Frame = 1 Query: 4 QGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 Q V G + LFK I++ KR +ET I EL E + +L++GAGKMG+L +++L G K+ V+NR+ + + E+ G KPLSE+ +AD++ +ST + + K+ + VE G LF +DI+VPR++ + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE Sbjct: 129 QQVKATGTIFNELFKQVITLAKRAHSETTIGESAMSVSYAAVELGKKIFGELTDC--HVLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEIMAEKYMGHA---KPLSELQCALLEADILISSTGASDYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_ALHEH (Glutamyl-tRNA reductase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=hemA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 75/217 (34.56%), Postives = 113/217 (52.07%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHWR 660 GR + LF+HA SV K+VRT+T I LA + + TA L+IGAG+ +LV +HL +G ++V NR+ ER + EL G E I PLSE+ + +ADV+ STAS P+ K VE AV R +D++VPR++ +++ +Y VDDL+EV+A N+ R A +A+ I+ + + + WR Sbjct: 133 GRVLDRLFQHAFSVAKQVRTDTGIGANPVSVAFAAVTLARQIFDDFQNRTA--LLIGAGETIELVARHLREQGLKNLIVANRNLERARQL-VELEGGEAI--PLSEIPTRLPEADVLVASTASPLPILGKG------TVERAVRKRRHRPMFMLDLAVPRDIEPEAGNLDDVYLYTVDDLREVIAENRRSREEAAHQAEEIVQRQVDQF----LSWR 334
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_GEOSL (Glutamyl-tRNA reductase OS=Geobacter sulfurreducens GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.470e-21 Identity = 67/191 (35.08%), Postives = 101/191 (52.88%), Query Frame = 1 Query: 52 AISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 A SV KRVRTET I ELA + S T +++IGAG+M +L KH + G ++V NR+ ER + EE G I ++ L + L AD+V +ST + + + ++ + FIDI+VPR++ V DVE +Y++DDL+ VVA+N + R +A +A+ II EE Sbjct: 145 AFSVAKRVRTETKIASSAVSVSFAAVELARKIFGDLSDKT--VMLIGAGEMCELAAKHFLNNGARGVMVTNRTYERAERLAEEFEGKAIHFEDLFDQLH---KADIVLSSTGATHYIIRPKDIDEV--IRRRKMKPMFFIDIAVPRDIDPKVNDVENVYLYDMDDLQNVVASNLQQRAEEAKKAEGIIEEE 328 HSP 2 Score: 22.7126 bits (47), Expect = 2.470e-21 Identity = 10/17 (58.82%), Postives = 10/17 (58.82%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTI 674 I QF W SLE PTI Sbjct: 329 IGQFYKWISSLEVTPTI 345
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_GEOBB (Glutamyl-tRNA reductase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=hemA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.470e-21 Identity = 73/192 (38.02%), Postives = 102/192 (53.12%), Query Frame = 1 Query: 52 AISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPV-EAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 A SV KRVRTET I ELA E S T +L+IGAG+M +L KH + G ++V NR+ ER + EE + + ++ L E L AD++ +ST AP F+ H +D+ V FIDI+VPR++ V +VE +Y VDDL VVA N E R +A +A+AI+ +E Sbjct: 145 AFSVAKRVRTETKIASSAVSVAFAAVELAKKIFGELSDKT--VLLIGAGEMCELAAKHFINTGVRGVMVTNRTYERAEKLAEEFDAKPVHFEALMETLP---KADIILSSTG--APHFII-HEKDMEEVLRRRKHKPMFFIDIAVPRDIDPKVNNVENCYLYTVDDLNGVVATNLEQRKVEAAKAEAIVEQE 328 HSP 2 Score: 23.0978 bits (48), Expect = 2.470e-21 Identity = 10/17 (58.82%), Postives = 10/17 (58.82%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTI 674 I QF W SLE PTI Sbjct: 329 IGQFFKWLSSLEVTPTI 345
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SOLUE (Glutamyl-tRNA reductase OS=Solibacter usitatus (strain Ellin6076) GN=hemA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21 Identity = 60/198 (30.30%), Postives = 105/198 (53.03%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 + GL + SV KRVR+ET I ELA ++ T ++++GAGKM +L +HL G + + V NR+ ER + + G + Y + ML + D++ S+ + + KD +Q + + A IDI+VPRN+ + D++ +Y++DDL+EVV +N +R+++A A+ +++EE Sbjct: 138 LDGLMSRSFSVAKRVRSETGIGQMAVSVSYAAVELARKIFGSLTNRT--VMIVGAGKMSELAARHLRRSGASHVFVTNRTHERAVDMAKLFQGTPVEYARFTAMLP---EVDILIASSGAPHYILHKDEMQRV--ISARRNKPMFLIDIAVPRNIEPAINDLDNVFLYDIDDLQEVVNSNLRERMKEADHAELLVTEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHEFN (Glutamyl-tRNA reductase OS=Shewanella frigidimarina (strain NCIMB 400) GN=hemA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21 Identity = 69/200 (34.50%), Postives = 107/200 (53.50%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 I LF++ SV K+VRT+T I +A K SS +T ++L+IGAG+ +LV KHL G MVV NR+ ER A+ EE N I + + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ + V +++ A +Y VDDL ++ N R A +A+ I ++S+ Sbjct: 134 IDRLFQNTFSVAKKVRTDTEIGAAAVSVAFAAVSMA--KHIFSSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTIERAQAMCEEFNATAITLEQIPDFL---PKADIVISSTASPLPILGKGMVE--KALKQRRHQPMLLVDIAVPRDIEAEVGELDDAFLYTVDDLHSIIEQNMASRKEAAEQAELITEDQSH 326
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SALCH (Glutamyl-tRNA reductase OS=Salmonella choleraesuis GN=hemA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21 Identity = 67/197 (34.01%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 +F+ + SV KRVRTET+I LA S +T +L++GAG+ +LV +HL KM++ NR+ ER A+ +E+ G E+I LS++ + DAD++ +STAS P+ K V+ +++ L +DI+VPR+V V + A +Y+VDDL+ +++ N R A+EA+ I+ +E++ Sbjct: 141 MFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIF--ESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLVQRQAAAVEAETIVEQEAS 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_METM6 (Glutamyl-tRNA reductase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=hemA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21 Identity = 65/200 (32.50%), Postives = 105/200 (52.50%), Query Frame = 1 Query: 25 RNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 R + GLF AI VG+R RTET I ELA ++ +L+IGAG+MG LV K L+ K ++V NR+ ER + EEL G+ + + L E ++ +DV+ +T+S + K+ + D+ G ++ IDI+ PR+V V + E ++Y +DDL+ + N + R+ + + II+EE Sbjct: 112 RYLDGLFLKAIHVGQRARTETKINEGGVSIGSAAVELAEKNFGLTNR---NVLLIGAGEMGTLVAKALLEKHIKAVIVSNRTYERAETLAEELKGIAVHFDKLKEAINF---SDVIICATSSPHYILKKEDLNDV--------GNKIIIDIANPRDVDDAVREFENIKLYTIDDLRNISDKNIQKRVEEVPAVEKIINEE 297 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |