FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_FRATF (Glutamyl-tRNA reductase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=hemA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 55/198 (27.78%), Postives = 95/198 (47.98%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAII 615 G+ + +F+ + KRVR+ET I LA +L S + +L+IGAG+ G+L+ +H+ A ++++ NR+ E+ I Y LSE+ AD++ + + +V D P R+FIDIS+P+ + + ++E Y VDD+ V+ NK+ R ++ +AQ II Sbjct: 134 GKELDRVFQKVFATAKRVRSETRIGYCPVSVAFSAITLAKRQLDNIS--SKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSVFRNASAHY--LSELPQLIKKADIIIAAVNVLEYIVTCKYVGDKP---------RVFIDISIPQALDPKLGELEQNVYYCVDDINAVIEDNKDKRKYESSKAQKII 318
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CHLTE (Glutamyl-tRNA reductase OS=Chlorobium tepidum GN=hemA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 54/196 (27.55%), Postives = 101/196 (51.53%), Query Frame = 1 Query: 52 AISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEII-YKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL----FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 A SV K+V+T T + ELA S+ + ++L+IGAG+ G+L KH+ AK +V+ NR++ + A+ EEL ++ Y+ E L + D++ T+ ++ K+++ + ++ ++ RL +D+ +PRNV V ++ + ++D LK ++ N E R + + +AII EE Sbjct: 145 AFSVAKKVKTRTKLMEGAVSVSYAAVELAQKIF--SNLSMKKVLLIGAGETGELAAKHMYAKNARNIVITNRTQSKAEALAEELGTNRVLPYESYKEHLH---EFDIIITAVST------KEYILNAAEMQQSMAKRRLKPVIILDLGLPRNVDPEVGALQNMFLKDIDALKHIIDKNLERRRAELPKVKAIIDEE 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CAMC1 (Glutamyl-tRNA reductase OS=Campylobacter concisus (strain 13826) GN=hemA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 58/203 (28.57%), Postives = 103/203 (50.74%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 G +IS + +A +VR ET I A TA +V+GAG+MG+L KHL++ G +++++NRS ERV + + L G + + ++ + D++F+STA+ + + ++ P E R F DI+VPR++ + + E VY VD L+E+V N R +A +A +I+ ++++ Sbjct: 136 GEDISKIIHYACKCAAKVRNETQISKNPISVSSVAVAKAKEIFGTLEGKTA--IVVGAGEMGELAAKHLISSG-AEVIIINRSSERVEQLVDSL-GDNASWDSILKLKEYVNNYDLIFSSTAAPHAIITGEIIE---PREFH----RYFFDIAVPRDID--LLNTELISVYTVDSLEEIVRKNLALREEQAQKAYSIVGQDTS 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BURP6 (Glutamyl-tRNA reductase OS=Burkholderia pseudomallei (strain 668) GN=hemA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 60/202 (29.70%), Postives = 95/202 (47.03%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAII 615 G ++ LF+ +V K VR T I LA + A R+L IGAG+M +L H A+G +++V NR+ ER A + E G + PL+++ + + D++ + TAS P+ L VE AV R +D++VPR++ V ++ +Y VDDL +V R +A+AII Sbjct: 142 GTYLNQLFQRTFAVAKEVRGTTEIGAQSVSMAAAAVRLAQRIFEQV--AQQRVLFIGAGEMIELCATHFAAQGPRELIVANRTAERGAKLAERFGGRAM---PLADLPARMHEFDIIVSCTASTLPII------GLGAVERAVKARRHRPIFMVDLAVPRDIEPEVGKLKDVFLYTVDDLGAIVREGNASRQAAVAQAEAII 332
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_ALCBS (Glutamyl-tRNA reductase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=hemA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 59/201 (29.35%), Postives = 96/201 (47.76%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISE 621 +S LF+ SV KR+RTET I A + + R L+IGAG+M +LV +HL + ++ + NR++ER + + + G I L E+ AD++ + TA+ P+ K VE A+ R +DI+VPR++ V ++ +Y VD L+E + N R + A EA +I + Sbjct: 135 LSRLFQEVFSVAKRIRTETGIGANPVSVAYAAVSFARHIFADLKKS--RALLIGAGEMIELVARHLSEQQVQEITIANRTQERASELAAAVGGRGI---SLEELPVALERADILISCTAAPLPIMGKG------MVERALKKRRHRPMFMVDIAVPRDIEPEVGELGDVYLYTVDHLQEAIQENVRSRQQAAQEASELIRD 324
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_NITSB (Glutamyl-tRNA reductase OS=Nitratiruptor sp. (strain SB155-2) GN=hemA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14 Identity = 57/205 (27.80%), Postives = 103/205 (50.24%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARV--YNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 G+ + + +A K VR+ T+I +A KL +A LV+GAG+MG+L KHL++ GC +++V R E+ + +E++ +I + +S + ++F++T+S+ P+ KD V++ R + D++VPR+ + ++ AR+ + VDDLKE+V N R +A A I+ N Sbjct: 136 GQKLGRVMHYAFKCSKEVRSSTDITRSPVSVASAAVSMAKEKLGNLGGMSA--LVVGAGEMGRLAAKHLISHGC-NVILVGRDLEKTKTVAQEID-PDIRVEHVSNLQKLINSYRLLFSATSSKNPVITKDMVKE-------QSFDRYWFDMAVPRD----IEEIYVARIHYFAVDDLKEIVNKNMAFREEQARNAYKIVGHHVN 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_METMA (Glutamyl-tRNA reductase OS=Methanosarcina mazei GN=hemA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14 Identity = 61/207 (29.47%), Postives = 99/207 (47.83%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQL 642 G+ + F+ AI VGKR+R ET I +LA +LVIGAG++G LV K L K + + NR+ ++ I EL G + + + L ADVV + T + + ++ V++ ++ L L IDI+ PR++ V ++E + N+D+L+ + R +A +A+AII EE L L Sbjct: 126 GKILETAFEKAIQVGKRIRNETRINKGSVSIGSAAVDLAEDIF--GGLTGKNVLVIGAGEIGVLVAKALAEKDIEAIYIANRTYKKAEEIAYELGGHAVRLDDIRDYLP---GADVVISGTGAPHYILTREIVEEA--IKCRERKL-LLIDIANPRDIEESVVELENVELCNIDNLRVISERTLRMRKEEAKKAEAIIQEEIRLLNL 324
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CORDI (Glutamyl-tRNA reductase OS=Corynebacterium diphtheriae GN=hemA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14 Identity = 58/203 (28.57%), Postives = 95/203 (46.80%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEL--NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 G + GL + ++ GKRV TET+I + AL ++ ++ A R LV+GAG M L HL G + V NR+ ER + + GV + D DVV ++T + + + AA G L + ID+S+PR++ VA+V + N++ L++V ++ + K AQ I++EE Sbjct: 135 GPALHGLVQASLHTGKRVHTETDIDDAGASMVSFACDEALAQMSATNFAGCRALVLGAGAMASLAATHLGRLGIEHITVANRTFERAQRLADHAVEAGVAASAIEFERRMDVLCDVDVVVSATGANT------FTIEAANIPAAHGDL-MMIDLSLPRDISDDVAEVPGVHLVNIEKLRDVASSGE----AKDHAAQRIVAEE 326
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BURVG (Glutamyl-tRNA reductase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hemA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14 Identity = 61/202 (30.20%), Postives = 94/202 (46.53%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAII 615 G ++ LF+ +V K VR T I LA + A R+L IGAG+M +L H A+G ++VV NR+ ER + E G + PLS++ + + D++ + TAS P+ L VE AV R +D++VPR++ V ++ +Y VDDL +V R +A+AII Sbjct: 140 GTYLNQLFQRTFAVAKEVRGTTEIGTQSVSMAAAAVRLAQRIFEKV--ADQRVLFIGAGEMIELCATHFAAQGPRELVVANRTAERGQRLAERFGGRAM---PLSDLPTRMHEFDIIVSCTASTLPII------GLGAVERAVKARRHRPIFMVDLAVPRDIEPEVGKLKDVFLYTVDDLGAIVREGNASRQAAVAQAEAII 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_EXISA (Glutamyl-tRNA reductase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=hemA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13 Identity = 60/211 (28.44%), Postives = 99/211 (46.92%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR-----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQ 639 G + LFK A+++ KR T+T I LA + +++V+GAG+ G+L +L G ++ V NR+E + A+ ++ G + E+ DAD++ +ST ++ + D V AA LR L IDI+VPR++ VA + +++VDDL +V N E RL +A + + I E Q Sbjct: 135 GTVFNKLFKEAVTLAKRAHTDTQIGEMSVSVSSAAVTLAQEMYQQLEDK--QVVVVGAGETGELTTLNLFEAGAKQIAVFNRTESKAKAVADKFKGRA---HSIREIACGLLDADILISSTGAKEAVIGYDDV-------AAAQLLRRERPLLLIDIAVPRDIDPAVATLPGVHLFDVDDLNGIVNKNLEARLVEAEKIEMKIDEAIQEFQ 333 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |