FC930970

Overview
NameFC930970
Unique NameFC930970
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU2 (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 53/153 (34.64%), Postives = 74/153 (48.37%), Query Frame = 2
Query:  233 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            +++++DLT  E +    + +  +  EA I AFL+ +R K ET  EIVG    M + A KVE   L                   ST ++ + AA G  VAK             D+LEA GV ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   14 VVNQLDLTTEEMSDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELAGKVELKTLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCTVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIGFMFAQSHHTAMK 166          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPU (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida GN=trpD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 52/153 (33.99%), Postives = 74/153 (48.37%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L                   ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   10 IVGQLDLTTEEMRDVMRQIMTGQCTEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMK 162          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_METCA (Anthranilate phosphoribosyltransferase OS=Methylococcus capsulatus GN=trpD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 49/158 (31.01%), Postives = 82/158 (51.90%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            E+++ L++  DL+ +  + ++  +++  A  A I AFL+ LR KGET  E+   A+ + + ATKV                       ST A+ + AA G +VAK             DVLEA G+ I+L P+ V+ C++  G+GF+ + ++H AMK+
Sbjct:    5 EVLETLLAGKDLSPSAMRETMRKIMSGGATPAQIGAFLIALRCKGETVEEVAAAAQVLREMATKVPVSAPHLLDTCGTGGDASKTFNISTTAAFVVAAAGGRVAKHGSRSVSGRSGSADVLEAAGINIELTPDQVKTCIETLGVGFLFAQRHHGAMKY 162          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_RALEJ (Anthranilate phosphoribosyltransferase OS=Ralstonia eutropha (strain JMP134) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15
Identity = 52/130 (40.00%), Postives = 65/130 (50.00%), Query Frame = 2
Query:  311 LISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            + +A L  LR K ET GEI   A+ M ++A KVE                       ST +  +AAA GAK+AK             DVLEALGV I L PE V +C+ + GIGFM +  +HPAMK V P
Sbjct:   66 MAAAILTGLRVKKETIGEISAAAQVMREFANKVEVTDRENFVDIVGTGGDGSHTFNISTASMFVAAAAGAKIAKHGNRGVSSKSGSADVLEALGVNIMLTPEQVGQCIAQTGIGFMFAPTHHPAMKNVAP 195          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_PSEF5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15
Identity = 49/154 (31.82%), Postives = 76/154 (49.35%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            ++  +DL+  E ++ + + +  +  +A I AF++ +R K E+  EIVG   AM + A +VE   L                   ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK+
Sbjct:   10 IVGHLDLSTEEMRSVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSAMRELADRVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQSHHGAMKY 163          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_DESPS (Anthranilate phosphoribosyltransferase OS=Desulfotalea psychrophila GN=trpD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15
Identity = 57/155 (36.77%), Postives = 77/155 (49.68%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLXXXXXXXXXXXXXXXXXXX---STGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            +++  DL+E+E  AS++ +++ +A  A I++F+  LR KGE   EIVG  R M   AT ++ GL                      ST  S + AA G  VAK             DVLEALGV + LDP  V R V E GIGF+ +   H AMK
Sbjct:   19 VVTGADLSESEMMASMEEVMSGQASPAQIASFITALRMKGEAVEEIVGAVRVMRDKATFIDCGLGPDDILMDIVGTGGDGADTFNVSTTTSFVVAAAGVAVAKHGNRAVSSRCGSADVLEALGVDLSLDPATVARSVQEIGIGFLFAPLLHAAMK 173          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_CELJU (Anthranilate phosphoribosyltransferase OS=Cellvibrio japonicus (strain Ueda107) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15
Identity = 53/152 (34.87%), Postives = 73/152 (48.03%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            L++ +DL+  E  + +  ++   A  A I  FLV LR KGET  EI G A  M + AT V   +                   ST ++ + AA G +VAK             DVLEA G+ +D+  E V RCV E G+GFM +  +H AMK
Sbjct:   10 LVASIDLSTEEMISVMRIVMTGGATPAQIGGFLVALRMKGETLDEITGAAMVMRELATPVNIDVDYLVDTCGTGGDGANLFNLSTASAFVVAAAGGRVAKHGNRSVSSSTGSADVLEAAGIKLDITAEQVARCVKEIGVGFMFAPSHHSAMK 161          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_BRAJA (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=trpD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15
Identity = 55/159 (34.59%), Postives = 73/159 (45.91%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +I  + +   L+  EA ++ D +++ EA  + +   L+ LR +GET  EI G   AM      V                      ST AS + +  G  VAK             DVL +LGV IDL PE V RCV E GIGFM +  +HPAMK V P
Sbjct:    7 IIGKVATGASLSRDEAASAFDAMMSGEATPSQMGGLLMALRVRGETVDEITGAVAAMRSKMLTVTAPPDAVDIVGTGGDGSGSVNVSTCASFIVSGAGVPVAKHGNRALSSRSGAADVLASLGVRIDLRPEQVGRCVRECGIGFMFAPAHHPAMKNVGP 165          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_NOCFA (Anthranilate phosphoribosyltransferase OS=Nocardia farcinica GN=trpD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 53/156 (33.97%), Postives = 78/156 (50.00%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            ++  L    DL+ A+   +++ ++++ A  A I+AF V ++ KG T  E+ GLA  M ++A  V                      ST +SI+ AA G  V K             DVLEALGV ++L PE V RCV E GIGF  +  +HPA++F
Sbjct:    1 MLGALADGRDLSAADTAWAMNEIMSDNATSAQIAAFGVAIKIKGPTPEELGGLATGMFEHARLVSIDGDAVDIVGTGGDRSGSVNISTMSSIVVAAAGVPVVKHGNRAASSKSGGADVLEALGVRLNLGPEAVARCVREVGIGFCFAPVFHPALRF 156          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_AZOC5 (Anthranilate phosphoribosyltransferase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 55/162 (33.95%), Postives = 72/162 (44.44%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  L++ +     L   EA  + D +++ E   + + A L+ LR +GET  EIVG    M      V+                     ST AS + A  G  VAK             DVL ALGV IDL P  + RC+ E GIGFM +  +HPAMK V P
Sbjct:    4 FRPLLNKVAMGTALNRDEAAYAFDKMMSGETTPSQMGALLMGLRVRGETVDEIVGAVSVMRAKMLTVDAPVGSVDVVGTGGDASGSYNISTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVRIDLAPAAISRCIAETGIGFMFAPTHHPAMKNVGP 165          
The following BLAST results are available for this feature:
BLAST of FC930970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
TRPD_PSEU25.558e-1534.64Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEPU5.558e-1533.99Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_METCA5.558e-1531.01Anthranilate phosphoribosyltransferase OS=Methyloc... [more]
TRPD_RALEJ7.259e-1540.00Anthranilate phosphoribosyltransferase OS=Ralstoni... [more]
TRPD_PSEF57.259e-1531.82Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_DESPS7.259e-1536.77Anthranilate phosphoribosyltransferase OS=Desulfot... [more]
TRPD_CELJU7.259e-1534.87Anthranilate phosphoribosyltransferase OS=Cellvibr... [more]
TRPD_BRAJA7.259e-1534.59Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_NOCFA9.481e-1533.97Anthranilate phosphoribosyltransferase OS=Nocardia... [more]
TRPD_AZOC59.481e-1533.95Anthranilate phosphoribosyltransferase OS=Azorhizo... [more]

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Properties
Property NameValue
Genbank descriptionC34100A04EF PostHarvP1 Citrus clementina cDNA clone C34100A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930970 ID=FC930970; Name=FC930970; organism=Citrus clementina; type=EST; length=694bp
GAACACAATGACAATGAGAGCCTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGGTGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCA
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