FC930970

Overview
NameFC930970
Unique NameFC930970
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_NATPD (Anthranilate phosphoribosyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.149e-18
Identity = 56/148 (37.84%), Postives = 73/148 (49.32%), Query Frame = 2
Query:  248 DLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            DLT+AEA+ +   +  EA EA I A L  LRAKGET  EI G A  M   A +++                      ST +S + A  G  VAK             DVLE +GV ID +P  V  C++E G+GFM++  +HPAMK V
Sbjct:   13 DLTQAEAREAASLVFEEATEAQIGALLSALRAKGETEPEIAGFAEGMRAAARRIDPDRSPLVDTCGTGGDGHDTINVSTTSSFVVAGAGVPVAKHGNYSVSSSSGSADVLEEIGVTIDAEPPAVETCIEETGMGFMLAPVFHPAMKAV 160          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_XANP2 (Anthranilate phosphoribosyltransferase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18
Identity = 60/162 (37.04%), Postives = 75/162 (46.30%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  L+  + +   LT  EA    D +++ EA  + + A L+ LR +GET  EI G    M      VE                     ST AS + A  G  VAK             DVL ALGV IDLDP G+ RC+ EAGIGFM +  +HPAMK V P
Sbjct:    4 FKPLLGKVATGASLTRDEAAYVFDKMMSGEATPSQMGALLMGLRVRGETVEEIAGAVSVMRSKMLSVEAPSEAVDVVGTGGDASGSYNISTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVRIDLDPAGISRCIAEAGIGFMFAPSHHPAMKHVGP 165          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP5 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=trpD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18
Identity = 60/162 (37.04%), Postives = 78/162 (48.15%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  +I  + +   LT  EA A+ D +++ EA  + + A L+ LR +GET  EI G   AM      V                      ST A+ + A CGA VAK             DVL ALGV ID+ P+ V RC+ EAGIGFM +  +HPAMK V P
Sbjct:    4 FKSIIGKVATGATLTRDEATAAFDAMMSGEATPSQMGALLMGLRVRGETVDEIAGAVSAMRAKMLTVTAPPDAVDVVGTGGDGSGSVNVSTCAAFIVAGCGAPVAKHGNRALSSRSGAADVLAALGVKIDITPDQVGRCIAEAGIGFMFAPTHHPAMKNVGP 165          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSF (Anthranilate phosphoribosyltransferase OS=Geobacter sp. (strain FRC-32) GN=trpD PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18
Identity = 58/167 (34.73%), Postives = 81/167 (48.50%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            ++ R DL+++E    +D +++ EA  A I+AF+  LR KGET  EI G AR M   AT++                 L                   ST  S + AACG KVAK             DV+EALG+ +++ PE V  C++EAGIGF+ +   H AMKF
Sbjct:    9 VVEREDLSQSEMIQVMDQIMSGEATPAQIAAFITALRMKGETVAEIAGAARVMRDRATRIRVGKNVLDLDRDDINIDLETILDVVGTGGDGTNTFNISTTVSFVVAACGVKVAKHGNRSVSSACGSADVVEALGISLEVTPETVENCINEAGIGFLYAPALHGAMKF 175          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_METKA (Anthranilate phosphoribosyltransferase OS=Methanopyrus kandleri GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17
Identity = 56/160 (35.00%), Postives = 82/160 (51.25%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +++ +I   DL   EA+  +  ++  E  +  ++  LV LR KG T  E+VG    M+++A KV+  +                   ST A + AAA G  VAK             D+LEALGV I+ DP+ V+RC++E G GFM + K+HPAMK V P
Sbjct:    3 VLERIIRGSDLDREEARDLMCRIVGGELSDVEVAGILVALRCKGYTSEELVGFVDGMMEHAVKVDPDVERLVDTAGTGGDELDTFNASTLAGLTAAAAGVPVAKHGNRSVTSECGSADILEALGVNIEADPDTVKRCIEEVGFGFMFAPKFHPAMKNVMP 162          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_METAC (Anthranilate phosphoribosyltransferase OS=Methanosarcina acetivorans GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17
Identity = 58/159 (36.48%), Postives = 81/159 (50.94%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXX--STGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            E I  L    DL+  EA+A++  +L+ A++  I AFL+ LRAKGE   EI G  R M +    ++ +                     ST A+I+ AA G  VAK             DVLEALG+ +DL P  VR+ +++ GIGFM +  +HPAMK V
Sbjct:    6 EYIKKLEEGSDLSSEEAEAAIGEILSTAEDEEIGAFLLALRAKGEKPQEIAGFVRGMKQAGNTIKPVTPFRVIDTCGTGGDGLNTINVSTAAAIVTAAAGVPVAKHGNRAATSMSGSSDVLEALGIKVDLTPGQVRKTIEKIGIGFMFAPVFHPAMKRV 164          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_BEII9 (Anthranilate phosphoribosyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17
Identity = 58/160 (36.25%), Postives = 75/160 (46.88%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            F   I  L +   LT AEA+A+ D +   E   A +  FL+ +R +GET  EI+G   AM     +V+                     ST AS++ AACG  VAK             DVL ALGV   LD  GV  C+  AGIGFMM+  +H AM+ V
Sbjct:    4 FKPFIAKLATGSSLTRAEAEAAFDQIFAGEVTPAQLGGFLMAMRVRGETVDEIIGAVTAMRARMVRVDAPTDAIDIVGTGGDGHGTFNVSTLASLIVAACGVPVAKHGNRAASSRSGASDVLSALGVRTGLDSAGVEACIRGAGIGFMMAQTHHTAMRHV 163          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_SALRD (Anthranilate phosphoribosyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=trpD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17
Identity = 58/162 (35.80%), Postives = 82/162 (50.62%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            N L+  +     L+  EA+ ++  +++  A +  I+A L+ LR +GET  E+VG  + M ++A  VE                      ST AS +AA  GA VAK             DVLEALGV IDL+ EGV  C+ EAGI F+ +  +HPAM+ V P
Sbjct:    2 NTLLQTIADGDPLSRPEAEEAMATMMSGSARDEHIAALLMGLRTRGETLDELVGFTKTMREFAVSVETDDPQTIDLCGTGGDGASTFNISTTASFIAAGAGATVAKHGNRSVSSQSGSADVLEALGVQIDLEKEGVEHCLHEAGIAFLFAPFFHPAMRHVMP 163          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPS (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=trpD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17
Identity = 59/162 (36.42%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  +I  + +   LT  EA ++ D +++ +A  + + A L+ LR +GET  EI G    M      V+                     ST AS + A CG  VAK             DVL ALGV ID+ PE V RCV EAGIGFM +  +HPAMK V P
Sbjct:    4 FKAIIAKVATGATLTRDEAASAFDGMMSGDATPSQMGALLMGLRVRGETVDEITGAVSTMRAKMLTVDAPADAVDIVGTGGDGSGSVNVSTCASFIVAGCGVPVAKHGNRALSSKSGAADVLNALGVRIDITPEHVGRCVTEAGIGFMFAPTHHPAMKNVGP 165          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK5 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=trpD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17
Identity = 55/160 (34.38%), Postives = 84/160 (52.50%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A  V+                      ST A+I+AA+ G KVAK             DVL+ LG+ I+L+   V  C+D  G+GF+ +  YH AMK V
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGNRAVSSQSGSADVLKELGININLEKSKVEHCIDNVGMGFLFAPSYHSAMKNV 162          
The following BLAST results are available for this feature:
BLAST of FC930970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
TRPD_NATPD3.149e-1837.84Anthranilate phosphoribosyltransferase OS=Natronom... [more]
TRPD_XANP24.112e-1837.04Anthranilate phosphoribosyltransferase OS=Xanthoba... [more]
TRPD_RHOP54.112e-1837.04Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_GEOSF5.371e-1834.73Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_METKA1.197e-1735.00Anthranilate phosphoribosyltransferase OS=Methanop... [more]
TRPD_METAC1.197e-1736.48Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_BEII91.197e-1736.25Anthranilate phosphoribosyltransferase OS=Beijerin... [more]
TRPD_SALRD2.041e-1735.80Anthranilate phosphoribosyltransferase OS=Saliniba... [more]
TRPD_RHOPS2.041e-1736.42Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_CLOK52.041e-1734.38Anthranilate phosphoribosyltransferase OS=Clostrid... [more]

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Properties
Property NameValue
Genbank descriptionC34100A04EF PostHarvP1 Citrus clementina cDNA clone C34100A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930970 ID=FC930970; Name=FC930970; organism=Citrus clementina; type=EST; length=694bp
GAACACAATGACAATGAGAGCCTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGGTGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCA
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