FC930970

Overview
NameFC930970
Unique NameFC930970
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_RHILO (Anthranilate phosphoribosyltransferase OS=Rhizobium loti GN=trpD PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.938e-17
Identity = 53/149 (35.57%), Postives = 73/149 (48.99%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L+  EA+ + D +++ +A    I  FL+ LR +GET  EI G    M     +VE                     STG++ + AA G  VAK             DVL ALGV ID+ P+ + RC+ EAG+GFM +  +HPAMK V P
Sbjct:   17 LSFEEAREAFDIIMSGDATPGQIGGFLMALRVRGETVSEISGAVATMRAKMLRVEAPAGAIDIVGTGGDNSHSVNISTGSAFVIAAAGVPVAKHGNRGLSSLTGAADVLIALGVKIDIPPDAIGRCIHEAGVGFMFAPAHHPAMKHVGP 165          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_RHILW (Anthranilate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17
Identity = 56/153 (36.60%), Postives = 75/153 (49.02%), Query Frame = 2
Query:  239 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GET  EIVG   AM      VE                     ST A+++ A  G  VAK             D L ALGV +D+ PE + RC+ EAG+GFM +  +H AM+ V P
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGETVDEIVGAVTAMRSKMLTVEAPEDAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLAALGVKLDVGPEIISRCIAEAGVGFMFAQLHHSAMRHVGP 165          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_NITWN (Anthranilate phosphoribosyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17
Identity = 57/159 (35.85%), Postives = 76/159 (47.80%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            LI  + +   LT  EA A+ + +++ EA  + +   L+ LR +GET  EI G   AM     +V+                     ST AS + A  G  VAK             D L ALG+ IDL PE V RC++EAGIGFM +  +HPAMK V P
Sbjct:    7 LIGKVATGATLTREEAAAAFNSMMSGEATPSQMGGLLMALRVRGETVDEITGAVSAMRSMMLRVKAPVDAVDVVGTGGDGSGSVNVSTCASFIVAGAGVTVAKHGNRALSSRSGAADCLAALGIRIDLTPEQVGRCINEAGIGFMFAPAHHPAMKNVGP 165          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_METBF (Anthranilate phosphoribosyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16
Identity = 55/149 (36.91%), Postives = 75/149 (50.34%), Query Frame = 2
Query:  248 DLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            DL+  EA+ ++  +L+ A +  I  FL+ LRAKGE   EI G  R M K    +  +                     ST A+I+ AA G  VAK             DVL+ALG+  DL+PE VR+ ++E GIGFM +  +HPAMK V
Sbjct:   13 DLSPEEAEDAVGKILSTAQDEEIGRFLLALRAKGEKPEEIAGFVRGMKKAGKTIRPKTSFRLVDTCGTGGDGLNTINISTAAAIVTAAAGVPVAKHGNRAATSMSGSSDVLDALGIKTDLEPEAVRQTIEEIGIGFMFAPVFHPAMKRV 161          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_GEOUR (Anthranilate phosphoribosyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16
Identity = 56/167 (33.53%), Postives = 79/167 (47.31%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            ++ R DLTE+E    +D +++ EA  A I+AF+  LR KGET  EI G AR M    T++                 L                   ST  + + +ACG KVAK             DVLE+LGV +D+  E + RC++E GIGF+ +   H AMK+
Sbjct:    9 VVEREDLTESEMIQVMDQVMSGEATPAQIAAFITALRMKGETVAEITGAARVMRDKVTRIRVGKNILDMDRDDINVDLETILDTCGTGGSCTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSACGSADVLESLGVNLDVTQETIERCINEIGIGFLFAPALHGAMKY 175          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_ARTAT (Anthranilate phosphoribosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16
Identity = 56/155 (36.13%), Postives = 79/155 (50.97%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            LI  LI+  DL     + +++ ++  EA  A I+ FLV LRAKGET  E+ GL  AM+++A  ++                     ST A+++AA  GAKV K             DVLEALGV +DL  E V R  +EAGI F  +  +HP+ +
Sbjct:   17 LISALINGDDLAVGNTEWAMNTIMAGEATPAQIAGFLVALRAKGETVEELAGLVEAMVQHANPIDISGEKLDIVGTGGDRLNTVNISTMAALVAAGAGAKVVKHGNRAASSASGSADVLEALGVRLDLSIEQVARNAEEAGITFCFAQVFHPSFR 171          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_RHOOB (Anthranilate phosphoribosyltransferase OS=Rhodococcus opacus (strain B4) GN=trpD PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16
Identity = 56/147 (38.10%), Postives = 79/147 (53.74%), Query Frame = 2
Query:  248 DLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            DL   +A+ ++D ++++ A  A I+AF V L+ KGET  E+ GLA +M+ +A KV                      ST AS++ AA G +V K             DVLEALGV I+L P+ V RCV E GIGF  +  +HPA++F
Sbjct:   31 DLAVDDAKWAMDEIMSDNATSAQIAAFGVALKMKGETPEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVREVGIGFCFAPVFHPALRF 177          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=trpD PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16
Identity = 55/158 (34.81%), Postives = 78/158 (49.37%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            E ++ ++ ++DLT  E QA +  ++  +  +A + AFL+ +R K ET  EIVG  + M + A  V                       ST AS + AA G KVAK             D+LEA GV +DL PE V R VD  G+GFM +  +H AMK+
Sbjct:    5 EALNRIVGQLDLTTEEMQAVMRQIMTGQCTDAQVGAFLMGMRMKSETIDEIVGAVQVMRELAAPVRFDTDKLVDTCGTGGDGMNIFNVSTAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGVFLDLTPEQVARSVDTVGVGFMFAPAHHGAMKY 162          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_METFK (Anthranilate phosphoribosyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=trpD PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.728e-16
Identity = 58/157 (36.94%), Postives = 75/157 (47.77%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLNEADEAL-ISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            LI   D T  E    +  ++  A   + I+ FL  LR KGET  EI   A+ M   ++KVE                       ST ++ +AA  GA++AK             DVLEALGV I L PE V RCV+EAGIGFM +  +H AMK+  P
Sbjct:   12 LIDHTDFTHEEMLDVMQQIMGGAFTTVQIAGFLAGLRVKGETVTEIAAAAQVMRALSSKVEVEDSSYLVDTCGTGGAPTKAFNVSTASAFVAAGAGARIAKHGGRAASSKSGSADVLEALGVNIGLTPEQVARCVNEAGIGFMFAPNHHAAMKYAAP 168          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_STRGG (Anthranilate phosphoribosyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=trpD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.257e-16
Identity = 54/156 (34.62%), Postives = 79/156 (50.64%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            L++ L+   DL+  E   ++D +++ EA +A I+ F V LRAKGET  E+ GL RAM  +A  +E                     ST ++I+ A  GAKV K             DVLE LGV ++L P  V    + AGI F  + K+HPA+++
Sbjct:   20 LLNPLLRGEDLSAEETAWAMDRIMSGEATDAQIAGFAVALRAKGETVDEVTGLVRAMYAHANTIEVPGRTVDIVGTGGDLAKTVNISTMSAIVIAGTGAKVVKHGNRAASSASGSSDVLEKLGVNLELTPRRVVEVAEAAGITFCFAVKFHPALRY 175          
The following BLAST results are available for this feature:
BLAST of FC930970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
TRPD_RHILO5.938e-1735.57Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_RHILW7.756e-1736.60Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_NITWN7.756e-1735.85Anthranilate phosphoribosyltransferase OS=Nitrobac... [more]
TRPD_METBF1.013e-1636.91Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_GEOUR1.013e-1633.53Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_ARTAT1.013e-1636.13Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_RHOOB1.323e-1638.10Anthranilate phosphoribosyltransferase OS=Rhodococ... [more]
TRPD_PSEU51.323e-1634.81Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_METFK1.728e-1636.94Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_STRGG2.257e-1634.62Anthranilate phosphoribosyltransferase OS=Streptom... [more]

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Properties
Property NameValue
Genbank descriptionC34100A04EF PostHarvP1 Citrus clementina cDNA clone C34100A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930970 ID=FC930970; Name=FC930970; organism=Citrus clementina; type=EST; length=694bp
GAACACAATGACAATGAGAGCCTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGGTGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCA
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