FC930970

Overview
NameFC930970
Unique NameFC930970
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_RHIL3 (Anthranilate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=trpD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.257e-16
Identity = 54/153 (35.29%), Postives = 75/153 (49.02%), Query Frame = 2
Query:  239 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            SR  LT  EA+++ D L++ +A  + I  FL+ LR +GET  EIVG   +M      VE                     ST A+++ A  G  VAK             D L ALGV +D+ PE + RC+ EAG+GFM +  +H AM+ V P
Sbjct:   13 SREPLTREEARSAFDILMSGQATPSQIGGFLMALRVRGETVDEIVGAVASMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLAALGVKLDVGPEIISRCIAEAGVGFMFAQMHHSAMRHVGP 165          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_PSEMY (Anthranilate phosphoribosyltransferase OS=Pseudomonas mendocina (strain ymp) GN=trpD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.257e-16
Identity = 55/157 (35.03%), Postives = 78/157 (49.68%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            E ++ +++++DLT  E QA + + +  +  +A I AFL+ +R K ET  EIVG A  M + A  V                       ST A+ + AA G KVAK             D+LEA GV + L PE V RCV+  G+GFM +  +H AMK
Sbjct:    5 EALNRIVAQLDLTTEEMQAVMREIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAASVMRELAAPVVIDAERLVDTCGTGGDGMNIFNVSTAAAFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGVYLGLKPEQVARCVESVGVGFMFAPSHHGAMK 161          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_HALMA (Anthranilate phosphoribosyltransferase OS=Haloarcula marismortui GN=trpD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.257e-16
Identity = 59/161 (36.65%), Postives = 78/161 (48.45%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV----EGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            E I+ +    DLT+AEA+A    +  +A EA I A L  LRAKGET  EI G A  M   A  +    EGL                   ST ++I+AA  G  +AK             DVLE +GV I+ +P  V   ++  GIGFM++  +HPAMK V
Sbjct:    3 EYIERVTDGDDLTQAEARAVATTVFEDATEAQIGALLTALRAKGETEAEIAGFAEGMRDAARTIRPDREGLVDTCGTGGDDYNTINV---STTSAIVAAGAGVPIAKHGNYSVSSSSGSADVLEEVGVDIEAEPPDVEETIERDGIGFMLAPVFHPAMKAV 160          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_VEREI (Anthranilate phosphoribosyltransferase OS=Verminephrobacter eiseniae (strain EF01-2) GN=trpD PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.947e-16
Identity = 52/135 (38.52%), Postives = 68/135 (50.37%), Query Frame = 2
Query:  296 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E   A+ +A +  LR K ET GEI   A+ M +++TKV+                       ST A  +AAA GAKV+K             DV+EALG+ I L PE + RC+ E GIGFM +  +HPAMK V P
Sbjct:   34 ELSPAMTAAIITGLRVKKETIGEITAAAQVMREFSTKVQVPDRKHLVDIVGTGGDGASTFNISTCAMFVAAAAGAKVSKHGGRSVSSKSGSADVMEALGIHIHLAPEAIARCIAEVGIGFMFAPNHHPAMKNVAP 168          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_STRAW (Anthranilate phosphoribosyltransferase OS=Streptomyces avermitilis GN=trpD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.947e-16
Identity = 55/158 (34.81%), Postives = 80/158 (50.63%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            E+++ L+   D +  +   ++D ++  EA +A I+ FLV LRAKGET  EI GL RAM ++A  +E                     ST +SI+ A  GAKV K             DVLE LG+ + L P+ V    +EAGI    + K+HPA++ V
Sbjct:   19 EVLNGLLDGRDQSADDTAWAMDRIMRGEATDAQIAGFLVALRAKGETVEEISGLVRAMYEHANLIEVPGATVDIVGTGGDGAKTVNISTMSSIVVAGTGAKVVKHGNRAASSASGSSDVLEKLGINLQLTPKRVAEVAEEAGITICFAVKFHPALRHV 176          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_THEFY (Anthranilate phosphoribosyltransferase OS=Thermobifida fusca (strain YX) GN=trpD PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16
Identity = 51/159 (32.08%), Postives = 81/159 (50.94%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            ++ LI  L++   LT  + + +++ +++  A +A I+ F + LRAKGE+  E+ GLA+ M+ +A  +                      ST ASI+A+A GA+V K             DVLE LGV+IDLDP       +E  I F  +  YHP++K+
Sbjct:    6 WSHLISALLNGTSLTADDTKWAMNEIMSGSATDAQIAGFAIALRAKGESVAEVRGLAQGMLDHAVTISVPGATLDIVGTGGDRAHTVNVSTMASIVASAAGARVVKHGNRAASSSCGTADVLERLGVIIDLDPADAVAVAEEVDITFCFAPLYHPSLKY 164          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_RHORT (Anthranilate phosphoribosyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=trpD PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16
Identity = 53/149 (35.57%), Postives = 73/149 (48.99%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L+EA+A  + + +++  A  A I  FL+ LR +GET  EI   AR M   A +++                     ST A+++ AACG  VAK             DVL ALGV +D D   V R + E GIGFM + ++H AMK V P
Sbjct:   24 LSEADATRAFEAIMSGNATPAQIGGFLMALRVRGETVAEITAAARTMRDKAARIQAPAGAIDIVGTGGDCAGTYNISTAAALVTAACGVPVAKHGNRAASSKSGSADVLAALGVNLDADLALVERSIAEVGIGFMFAQRHHSAMKHVAP 172          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_METNO (Anthranilate phosphoribosyltransferase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=trpD PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16
Identity = 53/149 (35.57%), Postives = 75/149 (50.34%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            LT  EA+ + D+LL+ E   A   AFL+ LR +GE   EIVG A A+ +   +V                      ST A+I+ A+CG  VAK             DVL ALGV + LDPE + +C+ +AG+ FM +  +H +M+ V P
Sbjct:   17 LTREEARTAFDHLLSGEVTHAQAGAFLMALRVRGEAADEIVGAAGALRERMVRVAAPPGAIDIVGTGGDHSGSYNVSTLAAIITASCGVPVAKHGNRAASSRSGAADVLAALGVRLGLDPEALAQCLAQAGLCFMFAQTHHASMRHVAP 165          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_BRASB (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=trpD PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16
Identity = 55/149 (36.91%), Postives = 72/149 (48.32%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L+  EA ++ D +++ EA  + + A L+ LR +GET  EI G    M     +V+                     ST A+ + A  G  VAK             DVL ALGV IDL P+ V RCV EAGIGFM +  +HPAMK V P
Sbjct:   17 LSREEAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPAGAVDIVGTGGDGSGSVNVSTCAAFIVAGAGIPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCVQEAGIGFMFAPAHHPAMKNVGP 165          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_POLSJ (Anthranilate phosphoribosyltransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=trpD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 2
Query:  296 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E    +++A +  LR K ET GEI   A+ M +++TKV                        ST +  +AAA GAKV+K             DV+EALG+ I+L PE + +C++EAG+GFM +  +HPAMK V P
Sbjct:   38 EMSPVMMAALITGLRVKKETIGEITAAAQVMREFSTKVHVADKTHLVDIVGTGGDGSHTFNISTCSMFVAAAAGAKVSKHGGRSVSSKSGSADVMEALGININLMPEAIAKCIEEAGVGFMFAPNHHPAMKNVAP 172          
The following BLAST results are available for this feature:
BLAST of FC930970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
TRPD_RHIL32.257e-1635.29Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_PSEMY2.257e-1635.03Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_HALMA2.257e-1636.65Anthranilate phosphoribosyltransferase OS=Haloarcu... [more]
TRPD_VEREI2.947e-1638.52Anthranilate phosphoribosyltransferase OS=Verminep... [more]
TRPD_STRAW2.947e-1634.81Anthranilate phosphoribosyltransferase OS=Streptom... [more]
TRPD_THEFY3.849e-1632.08Anthranilate phosphoribosyltransferase OS=Thermobi... [more]
TRPD_RHORT3.849e-1635.57Anthranilate phosphoribosyltransferase OS=Rhodospi... [more]
TRPD_METNO3.849e-1635.57Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_BRASB3.849e-1636.91Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_POLSJ5.027e-1636.30Anthranilate phosphoribosyltransferase OS=Polaromo... [more]

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Properties
Property NameValue
Genbank descriptionC34100A04EF PostHarvP1 Citrus clementina cDNA clone C34100A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930970 ID=FC930970; Name=FC930970; organism=Citrus clementina; type=EST; length=694bp
GAACACAATGACAATGAGAGCCTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGGTGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCA
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