FC930970

Overview
NameFC930970
Unique NameFC930970
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD1_STRCO (Anthranilate phosphoribosyltransferase 1 OS=Streptomyces coelicolor GN=trpD1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15
Identity = 58/173 (33.53%), Postives = 84/173 (48.55%), Query Frame = 2
Query:  173 PAVSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            PA  D T   +  +  L++ L+   DL+  +   +LD ++  EA +  I+ F V LR KGET  EI GL R M ++A  +E                     ST ++I+ A  GAKV K             DVLE LGV ++L P+ V    +EAGI F  + K+HPA++ V
Sbjct:    6 PAGGDTTADRS--WPALLNGLLDGRDLSADDTAWALDVIMRGEATDVQIAGFAVGLRFKGETVEEISGLVRTMYEHANVIEVPGKTVDIVGTGGDGAKTVNISTMSAIVLAGTGAKVVKHGNRAASSASGASDVLEKLGVNLELTPQRVAEVAEEAGITFCFAVKFHPALRHV 176          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_RHOFD (Anthranilate phosphoribosyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=trpD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15
Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 2
Query:  287 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +  E    +++A +  LR K ET GEI   A+ M +++TKV                        ST A  +AAA GA+V+K             DV+E+LGV I+L PE + +C+++ G+GFM +  +HPAMK V P
Sbjct:   35 MTGEWSPVMMAALITGLRVKKETIGEITAAAQVMREFSTKVNVADTSHLVDIVGTGGDGSHTFNISTCAMFVAAAAGARVSKHGGRSVSSKSGSADVMESLGVNINLSPEAIAQCIEQVGVGFMFAPNHHPAMKNVAP 172          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPK (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain KT2440) GN=trpD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15
Identity = 52/153 (33.99%), Postives = 74/153 (48.37%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L                   ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   10 IVGQLDLTTEEMREVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMK 162          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_PSEP1 (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=trpD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15
Identity = 52/153 (33.99%), Postives = 74/153 (48.37%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L                   ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   10 IVGQLDLTTEEMREVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMK 162          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_SALTO (Anthranilate phosphoribosyltransferase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15
Identity = 57/163 (34.97%), Postives = 76/163 (46.63%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV----EGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L+  L+   +L  A+ A A  + +   A  A I+ F V LRAKGET  E+ GL  AM+ +A  V    E                     ST AS++ A  G +V K             DVLE LG+ +DL PE V  CV EAGIGF  + ++HP M+   P
Sbjct:    9 LLAALLRGDELCTADTAWAMGEIMSGSAGPAQIAGFAVALRAKGETPTELAGLVEAMLTHAVPVNLPAELRATAVDVVGTGGDLAHTVNISTMASLVVAGAGVRVVKHGNRAASSSCGTADVLEFLGLPLDLGPEAVATCVAEAGIGFCFAARFHPGMRHAGP 171          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_AZOBR (Anthranilate phosphoribosyltransferase OS=Azospirillum brasilense GN=trpD PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15
Identity = 54/149 (36.24%), Postives = 74/149 (49.66%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L EAEA  + D +++  A  + +  FL+ LR +GET  EI G AR M   A  VE                     ST A+++ AACG  VAK             DVL ALGV +D D   VR+ + +A IGF+M+ ++H AM+ V P
Sbjct:   27 LNEAEASLAFDIIMSGNATPSQMGGFLMALRVRGETVDEITGAARVMRAKAIPVEAPDGTIDTCGTGGDGSGTYNISTAAAVVIAACGVPVAKHGNRAMSSKSGAADVLGALGVNLDCDLGLVRKALWDARIGFLMAPRHHLAMRNVGP 175          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_ALKMQ (Anthranilate phosphoribosyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=trpD PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15
Identity = 55/158 (34.81%), Postives = 73/158 (46.20%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            + ID +I R DL E E  A +  ++  +  ++ I  FL  LR KGET  EI   A+ M   A  VE                      ST  + +AAA G  V K             DVLE LGV IDL P+ V  CV++  +GFM + K+H AMK+
Sbjct:    4 QAIDKVIRRQDLAETEMMAVMQGIMEGKVTDSQIGGFLTALRMKGETVEEITASAKVMRSKALVVEVNQPHSIDTCGTGGDQANTFNISTAVAFVAAAAGVTVVKHGNRSVSSQCGSADVLEKLGVNIDLTPKQVETCVEQVNMGFMFAPKFHQAMKY 161          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_STRT2 (Anthranilate phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 51/154 (33.12%), Postives = 78/154 (50.65%), Query Frame = 2
Query:  239 SRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV-EGLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +R DL++ + Q   D +L NE  E+ I++FL+ L+ KGET  EI G+ RA+  +AT + E                     ST A  + AA G ++AK             DVLE LG+ +   PE + + +DE G+ F+ +   HPAM+F+ P
Sbjct:   10 NRQDLSQDQVQVVFDRILKNEVSESQIASFLMGLKIKGETSDEITGIVRALKSHATVLPETFTDAMCNCGTGGDQSYSFNISTTACFVLAAGGIRMAKAGNRSISSKSGSADVLEVLGINVAASPEILSKALDEVGLAFIFAQTMHPAMRFIGP 163          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_RHOBA (Anthranilate phosphoribosyltransferase OS=Rhodopirellula baltica GN=trpD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 56/172 (32.56%), Postives = 85/172 (49.42%), Query Frame = 2
Query:  179 VSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLXXXXXXXXXXXXXXXXXXX-STGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            ++D++   +  F++ I       DL+  +  A +D +L   A+E  +   L+ LR KGE   E+VG ARAM K+ T+++                      ST  +ILA+ACG  VAK             DVLE LGV I+ +P+ V R +++ GI F  + K HPAM+ V
Sbjct:    1 MTDSSTDPSLSFSDAITHARGGNDLSAEQTGALIDAMLQGAANEEEVGQLLLALREKGEAVSELVGAARAMRKHMTRIDHEHDVLLDTCGTGGSGSGTFNISTAVAILASACGVAVAKHGNRRATSKTGSADVLECLGVKIESEPDQVSRRLNDIGICFCFAAKLHPAMRHV 172          
BLAST of FC930970 vs. ExPASy Swiss-Prot
Match: TRPD_RALEH (Anthranilate phosphoribosyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=trpD PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 52/130 (40.00%), Postives = 65/130 (50.00%), Query Frame = 2
Query:  311 LISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLXXXXXXXXXXXXXXXXXXXSTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            + +A L  LR K ET GEI   A+ M ++A KV                        ST +  +AAA GAK+AK             DVLEALGV I L PE V +C++E GIGFM +  +HPAMK V P
Sbjct:   38 MAAAILTGLRVKKETIGEISAAAQVMREFANKVPVADRENFVDIVGTGGDGSHTFNISTASMFVAAAAGAKIAKHGNRGVSSKSGSADVLEALGVNIMLTPEQVGQCIEETGIGFMFAPTHHPAMKNVAP 167          
The following BLAST results are available for this feature:
BLAST of FC930970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
TRPD1_STRCO2.495e-1533.53Anthranilate phosphoribosyltransferase 1 OS=Strept... [more]
TRPD_RHOFD3.259e-1534.06Anthranilate phosphoribosyltransferase OS=Rhodofer... [more]
TRPD_PSEPK3.259e-1533.99Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEP13.259e-1533.99Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_SALTO4.256e-1534.97Anthranilate phosphoribosyltransferase OS=Salinisp... [more]
TRPD_AZOBR4.256e-1536.24Anthranilate phosphoribosyltransferase OS=Azospiri... [more]
TRPD_ALKMQ4.256e-1534.81Anthranilate phosphoribosyltransferase OS=Alkaliph... [more]
TRPD_STRT25.558e-1533.12Anthranilate phosphoribosyltransferase OS=Streptoc... [more]
TRPD_RHOBA5.558e-1532.56Anthranilate phosphoribosyltransferase OS=Rhodopir... [more]
TRPD_RALEH5.558e-1540.00Anthranilate phosphoribosyltransferase OS=Ralstoni... [more]

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Properties
Property NameValue
Genbank descriptionC34100A04EF PostHarvP1 Citrus clementina cDNA clone C34100A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930970 ID=FC930970; Name=FC930970; organism=Citrus clementina; type=EST; length=694bp
GAACACAATGACAATGAGAGCCTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGGTGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCA
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