FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15265 contig Ccv1_Contig15265:599..1111. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 2.954e-92
Identity = 160/170 (94.12%), Postives = 168/170 (98.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPE MPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTV+ISTQHDETVTND+IAADLK+HVIKPVIP+KYLD++TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARRCI
Sbjct:  134 TPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVVISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 5.039e-92
Identity = 160/170 (94.12%), Postives = 168/170 (98.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRK+GTCPWLRPDGKTQVTVEYYN+ GAMVPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPV+P+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARRCI
Sbjct:  134 TPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_GOSHI (S-adenosylmethionine synthetase OS=Gossypium hirsutum GN=SAMS PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 6.581e-92
Identity = 159/170 (93.53%), Postives = 168/170 (98.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+ GAMVPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARRC+
Sbjct:  134 TPELMPLTHVLATRLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCV 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 6.581e-92
Identity = 161/170 (94.71%), Postives = 168/170 (98.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEY+NENGAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARRCI
Sbjct:  134 TPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNENGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 6.581e-92
Identity = 158/170 (92.94%), Postives = 169/170 (99.41%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEY+N++GAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKP++P+K+LD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI
Sbjct:  134 TPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYFNDHGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPIVPEKFLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 1.122e-91
Identity = 160/170 (94.12%), Postives = 166/170 (97.65%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKP+IP KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGR IIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARRCI
Sbjct:  134 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPIIPAKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRMIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 1.466e-91
Identity = 159/170 (93.53%), Postives = 167/170 (98.24%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEY N+NGAM+P++VHTVLISTQHDETVTNDEIA DLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI
Sbjct:  134 TPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYCNDNGAMIPIKVHTVLISTQHDETVTNDEIARDLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 1.915e-91
Identity = 160/170 (94.12%), Postives = 166/170 (97.65%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            T ELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNE GA VP+RVHT+LISTQHDETVTNDEIAADLK+HVIKPVIPDKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARRCI
Sbjct:  134 TSELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNEKGATVPIRVHTLLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 2.501e-91
Identity = 161/170 (94.71%), Postives = 167/170 (98.24%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKNGTCPWLRPDGKTQVT+EY NE+GAMVPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR I
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYINESGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRVI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 2.501e-91
Identity = 159/170 (93.53%), Postives = 167/170 (98.24%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEY+N+ GA VP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARRCI
Sbjct:  134 TPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYHNDGGARVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCI 303
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_CATRO2.954e-9294.12S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK2_ELAUM5.039e-9294.12S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK_GOSHI6.581e-9293.53S-adenosylmethionine synthetase OS=Gossypium hirsu... [more]
METK5_VITVI6.581e-9294.71S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK4_VITVI6.581e-9292.94S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]
METK2_DAUCA1.122e-9194.12S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK1_SOLTU1.466e-9193.53S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK_CAMSI1.915e-9194.12S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK4_ARATH2.501e-9194.71S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK2_VITVI2.501e-9193.53S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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