FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_YERPS (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.129e-46
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +V +    V++STQH E +   ++   + + +IKPV+P +++   T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_YERPP (S-adenosylmethionine synthetase OS=Yersinia pestis (strain Pestoides F) GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.129e-46
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +V +    V++STQH E +   ++   + + +IKPV+P +++   T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_YERPN (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.129e-46
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +V +    V++STQH E +   ++   + + +IKPV+P +++   T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_YERPG (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.129e-46
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +V +    V++STQH E +   ++   + + +IKPV+P +++   T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_YERPE (S-adenosylmethionine synthetase OS=Yersinia pestis GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.129e-46
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +V +    V++STQH E +   ++   + + +IKPV+P +++   T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_YERPB (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.129e-46
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +V +    V++STQH E +   ++   + + +IKPV+P +++   T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_YERPA (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.129e-46
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +V +    V++STQH E +   ++   + + +IKPV+P +++   T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_YERP3 (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.129e-46
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +V +    V++STQH E +   ++   + + +IKPV+P +++   T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_VIBCH (S-adenosylmethionine synthetase OS=Vibrio cholerae GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.129e-46
Identity = 90/169 (53.25%), Postives = 120/169 (71.01%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +   VRKNGT PWLRPD K+QVT +Y  + G +V +    V++STQH ++++  ++   + + +IKPV+P ++L  +T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+G+A RC
Sbjct:  132 TEVLMPAPITYAHRLMQRQAAVRKNGTLPWLRPDAKSQVTFQY--DQGKIVGI--DAVVLSTQHSDSISTADLREAVMEEIIKPVLPAEWLSKETKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGMADRC 296
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRST (S-adenosylmethionine synthetase OS=Streptomyces spectabilis GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.129e-46
Identity = 97/176 (55.11%), Postives = 124/176 (70.45%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAA-DLKQHVIKPVIPDKYLDDKTI------FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   LA +L  +L+EVRKNGT P+LRPDGKTQVT+EY  +      VR+ TV++S+QH   +  + + A D+++ V++P +     D   +        +NP+GRF IGGP GDAGLTGRKIIIDTYGG   HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA RC
Sbjct:  141 TPELMPLPIHLAHRLSRRLSEVRKNGTIPYLRPDGKTQVTIEYDGDKA----VRLDTVVVSSQHASDIDLESLLAPDIREFVVEPELKALVEDGIKLETEGYRLLVNPTGRFEIGGPMGDAGLTGRKIIIDTYGGMSRHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLASRC 312
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_YERPS7.129e-4653.85S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPP7.129e-4653.85S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPN7.129e-4653.85S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPG7.129e-4653.85S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPE7.129e-4653.85S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPB7.129e-4653.85S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPA7.129e-4653.85S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERP37.129e-4653.85S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_VIBCH7.129e-4653.25S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]
METK_STRST7.129e-4655.11S-adenosylmethionine synthetase OS=Streptomyces sp... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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