FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15265 contig Ccv1_Contig15265:599..1111. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 8.044e-90
Identity = 156/170 (91.76%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY NE GAMVP+RVHTVL+STQHDETVTN++IA DLK+HVIKPVIP +YLDD+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VASGLARRCI
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLVSTQHDETVTNEQIAKDLKEHVIKPVIPPQYLDDQTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 8.044e-90
Identity = 158/170 (92.94%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEY NE+GA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAY+ RQAAKSIVASGLARRCI
Sbjct:  137 TPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCI 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 8.044e-90
Identity = 158/170 (92.94%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEY NE+GA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAY+ RQAAKSIVASGLARRCI
Sbjct:  137 TPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCI 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 1.051e-89
Identity = 157/170 (92.35%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNG C WLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYI RQAAKSIVA+GLARRCI
Sbjct:  137 TPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYQNDNGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANGLARRCI 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 1.051e-89
Identity = 158/170 (92.94%), Postives = 164/170 (96.47%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNGTC W+RPDGKTQVTVEY NE+GAMVPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYI RQAAKSI+ASGLARRCI
Sbjct:  136 TPELMPLSHVLATKLGARLTEVRKNGTCAWVRPDGKTQVTVEYLNEDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCI 305
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 1.051e-89
Identity = 156/170 (91.76%), Postives = 164/170 (96.47%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPE MPLSHVLATKLGA LTEVRKNGTCPWLRPDGKTQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRF  GGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVR+AAKSIVA+GLARRC+
Sbjct:  136 TPEFMPLSHVLATKLGASLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFRHGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVREAAKSIVANGLARRCL 305
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 1.372e-89
Identity = 157/170 (92.35%), Postives = 164/170 (96.47%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKN TCPWLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTND+IA DLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VASGLARRCI
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 1.372e-89
Identity = 157/170 (92.35%), Postives = 164/170 (96.47%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKN TCPWLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTND+IA DLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VASGLARRCI
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 327.791 bits (839), Expect = 1.792e-89
Identity = 155/170 (91.18%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTNDEIA DLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VA+G+ARR +
Sbjct:  134 TPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIARDLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRAL 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 3.057e-89
Identity = 156/170 (91.76%), Postives = 163/170 (95.88%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKN TCPWLRPDGKTQVTVEY NE GAM+P+RVHTVLISTQHDETVTNDEIA DLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VA+GLARRCI
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNEGGAMIPIRVHTVLISTQHDETVTNDEIAVDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVATGLARRCI 303
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_VITVI8.044e-9091.76S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK1_ORYSJ8.044e-9092.94S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI8.044e-9092.94S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK3_ORYSJ1.051e-8992.35S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK3_HORVU1.051e-8992.94S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK2_PEA1.051e-8991.76S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK3_SOLLC1.372e-8992.35S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]
METK2_SOLTU1.372e-8992.35S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK1_ARATH1.792e-8991.18S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK4_BRAJU3.057e-8991.76S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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