FC930975

Overview
NameFC930975
Unique NameFC930975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig879 contig Ccv1_Contig879:19..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: DKGA_SALTY (2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhimurium GN=dkgA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.152e-22
Identity = 71/201 (35.32%), Postives = 95/201 (47.26%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGI 655
            I L +G  MP +GLGVW+     +   I  A+++GYR ID A  Y+NE  VG+AL  A     V RE+LFITTKLWN D     EA ++S             +H+PV          D  +DA               W  M  L   GLV+SIG+ N+ I   +  +  + V PV+NQ E HP  Q+  L  +   H I
Sbjct:    7 IRLQDGNVMPQLGLGVWKASNEEVIAAIHKALEVGYRSIDTATAYQNEEGVGKALKAA----SVAREELFITTKLWNDDQKRPREALQESLKKLQLDYLDLYLMHWPVP-------AIDHYVDA---------------WKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKI 181          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: DKGA_SALTI (Putative 2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhi GN=dkgA PE=5 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.152e-22
Identity = 71/201 (35.32%), Postives = 95/201 (47.26%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGI 655
            I L +G  MP +GLGVW+     +   I  A+++GYR ID A  Y+NE  VG+AL  A     V RE+LFITTKLWN D     EA ++S             +H+PV          D  +DA               W  M  L   GLV+SIG+ N+ I   +  +  + V PV+NQ E HP  Q+  L  +   H I
Sbjct:    7 IRLQDGNVMPQLGLGVWKASNEEVIAAIHKALEVGYRSIDTATAYQNEEGVGKALKAA----SVAREELFITTKLWNDDQKRPREALQESLKKLQLDYLDLYLMHWPVP-------AIDHYVDA---------------WKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVPPVINQIELHPLMQQRQLHAWNATHKI 181          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.351e-22
Identity = 76/204 (37.25%), Postives = 104/204 (50.98%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVW---RMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHG--HVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVK 634
            I LN+G  +PIIGLG +   R         +  AI  GYRHID A  YRNE EVGEA+ E  + G VKRE++F   KLW++DH    V  A + +             +  P+A K    G      D +G + I    +L  TW A+E     GLV+S+G+SN+     ++ L +  L Y   KPV NQ E HPYF +  L++
Sbjct:   10 IPLNDGNSIPIIGLGTYSDPRPVPGKTFIAVKTAIDEGYRHIDGAYVYRNEHEVGEAIREKVAEGKVKREEIFYCGKLWSTDHDPEMVRPALERTLQTLKLDYIDLYIIEMPMAFK---PGEEFYPKDENGRV-IYHKSNLCATWEALEACKDAGLVKSLGVSNFNRRQLEVILNKPGLKY---KPVTNQVECHPYFTQTKLLE 206          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.749e-22
Identity = 64/199 (32.16%), Postives = 102/199 (51.26%), Query Frame = 2
Query:   77 MPIIGLGVWRMDESNIRDL---IINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLV-KREDLFITTKLWNSD--HGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGI 655
            MP IG+G      ++  +    ++ AI++GYRH D A  Y  E  V EA+AEA   GLV  R D+F+T+KLW SD   G V+ A +++             VH+P        G+ D     +   E+     +E  W  ME+   +GL R+IG+SN+        L+++ V+P  NQ E +P +Q+ +L + C++ G+
Sbjct:   18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPATV---APGSYDFPFPKE---EMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMNPMWQQRTLREVCRREGV 210          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.749e-22
Identity = 70/219 (31.96%), Postives = 109/219 (49.77%), Query Frame = 2
Query:   47 MAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKI----GYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDH-GHVLEAC-KDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDI-----FLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + + LN+G  +P++G G   + E   +D +I A KI    G+RH D A  Y  E EVG+A+      G VKRED+F T+KLW++ H   ++  C + +             +HFP+A +    G      D  G L  + T+ +  TW AME     GL +SIG+SN++       L +  L Y   KPV NQ E H Y  +  ++ +C+   I + ++
Sbjct:    6 LRVALNDGNFIPVLGFGT-TVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQ---PGDIFFPRDEHGKLLFE-TVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKY---KPVCNQVECHLYLNQSKMLDYCKSKDIILVSY 216          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: MORA_PSEPU (Morphine 6-dehydrogenase OS=Pseudomonas putida GN=morA PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.078e-20
Identity = 69/207 (33.33%), Postives = 97/207 (46.86%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTA 667
            I LNNG KMP +GLGV+          I +AI  GYR ID A  Y NEA+VGE +  +     V R ++F+TTKL+N D+G+   L A  +S             +H+P                     + + TI    +W A E ++  G  R+IG+ N+      + +A S V P VNQ E HPYF +  L+   +  GI   A
Sbjct:    8 INLNNGVKMPALGLGVFAASAEETASAIASAISSGYRLIDTARSYNNEAQVGEGIRNSG----VDRAEMFVTTKLFNCDYGYERALRAFDESLGRLGLDYVDLYLLHWPTK-------------------DWNATIQ---SWKAAEKILGDGRARAIGVCNFLEDQLDELIAASDVVPAVNQIELHPYFAQKPLLAKNRALGIVTEA 188          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: DKGA_CORSC (2,5-diketo-D-gluconic acid reductase A OS=Corynebacterium sp. (strain ATCC 31090) GN=dkgA PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.408e-20
Identity = 65/206 (31.55%), Postives = 99/206 (48.06%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGI 655
            + +I LN+G  +P +G GV+++  ++ +  +  A+++GYRHID AA Y NE  VG A+A +     + R+DLFITTKLWN  H       A  +S             VH+P                AD  +           W  M +L + GL RSIG+SN+ +      +A + V P VNQ E HP +Q+  +  +   H +
Sbjct:    3 VPSIVLNDGNSIPQLGYGVFKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAASG----IARDDLFITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPA-------------ADNYVH---------AWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDV 182          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: DKGA_YERPE (2,5-diketo-D-gluconic acid reductase A OS=Yersinia pestis GN=dkgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.125e-20
Identity = 64/201 (31.84%), Postives = 92/201 (45.77%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGI 655
            I L +G  MP +GLGVW+         +  A+++GYR ID AA Y+NE  VG+AL  A     V R++LFITTKLWN D  +  +A + S             +H+P   +   V                      + W  +  L   GL+RSIG+ N+ I   +  +  + + P VNQ E HP  Q+  L  +   H I
Sbjct:    7 IKLYDGRLMPQLGLGVWQASIQETELAVSKALEVGYRSIDTAAIYKNEEGVGKALKAA----AVARDELFITTKLWNDDQHNPQQALETSLQKLQLDYVDLYLIHWPDPKQDHYV----------------------SAWRELVTLKEQGLIRSIGVCNFHIPHLQRLIDETGIAPTVNQIELHPLLQQRQLHAWNATHHI 181          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y2161_MYCVP (Uncharacterized oxidoreductase Mvan_2161 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_2161 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.467e-19
Identity = 66/211 (31.28%), Postives = 96/211 (45.50%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHG--HVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I  + LN+   MP+IGLGV  + ++     ++ A++ GYR ID AA Y NEA VG A+A++     V R +LF+TTKL   D G     +A + S             +H+P  ++ T V                       +W  +  L  +GL RSIG+SN+      D +  S   P VNQ E HP   +  L     +HGI   A+
Sbjct:    7 IPTVILNDDNTMPVIGLGVGELSDAEAEQSVLAALEAGYRLIDTAAAYGNEAAVGRAIAKSG----VPRGELFVTTKLATDDLGFQSSQDALRASLERLGLDYVDLYLIHWPAGSQGTYV----------------------DSWGGLMKLKELGLTRSIGVSNFHAQHLDDIIGLSFFTPAVNQIELHPLLNQAELRAVNAEHGIVTEAY 191          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y4205_MYCGI (Uncharacterized oxidoreductase Mflv_4205 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_4205 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.009e-18
Identity = 65/211 (30.81%), Postives = 96/211 (45.50%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHG--HVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I  +TLN+   MP+IGLGV  + ++     +  A++ GYR ID AA Y NEA VG A+A +     V R++LF+TTKL   D G     +A + S             +H+PV+ +   V                       +W  +     +GL RSIG++N+      D ++ S   P VNQ E HP   +  L     +HGI   A+
Sbjct:    7 IPTVTLNDDNTMPVIGLGVGELSDAETEQAVTAALEAGYRLIDTAAAYGNEAAVGRAIAASG----VPRDELFVTTKLATEDAGFQSSQDALRASLERLGLDYVDLYLIHWPVSQQGKHV----------------------DSWGGLMKSKEVGLTRSIGVANFHGHHLDDIISLSFFTPAVNQIELHPLLNQAELRAVNAEHGIATEAY 191          
The following BLAST results are available for this feature:
BLAST of FC930975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
DKGA_SALTY1.152e-2235.322,5-diketo-D-gluconic acid reductase A OS=Salmonel... [more]
DKGA_SALTI1.152e-2235.32Putative 2,5-diketo-D-gluconic acid reductase A OS... [more]
AK1D1_RAT3.351e-2237.253-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
NADO2_ORYSJ9.749e-2232.16Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
DIDH_RAT9.749e-2231.963-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
MORA_PSEPU1.078e-2033.33Morphine 6-dehydrogenase OS=Pseudomonas putida GN=... [more]
DKGA_CORSC1.408e-2031.552,5-diketo-D-gluconic acid reductase A OS=Coryneba... [more]
DKGA_YERPE9.125e-2031.842,5-diketo-D-gluconic acid reductase A OS=Yersinia... [more]
Y2161_MYCVP3.467e-1931.28Uncharacterized oxidoreductase Mvan_2161 OS=Mycoba... [more]
Y4205_MYCGI1.009e-1830.81Uncharacterized oxidoreductase Mflv_4205 OS=Mycoba... [more]

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Properties
Property NameValue
Genbank descriptionC34100A10EF PostHarvP1 Citrus clementina cDNA clone C34100A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930975 ID=FC930975; Name=FC930975; organism=Citrus clementina; type=EST; length=671bp
CAGAGCAAAAGCAGAGAAAGAAAGGGTGAGTGAGTAAAGAGAAATAATGG
CAATAACACTCAACAATGGATTCAAGATGCCAATAATTGGACTGGGTGTT
TGGCGCATGGATGAATCAAACATTAGAGACCTCATCATCAATGCCATCAA
GATTGGCTATCGCCATATTGACTGTGCTGCTGATTATAGGAATGAAGCGG
AAGTTGGGGAGGCACTTGCAGAAGCATTTAGCACTGGGCTTGTCAAGAGG
GAGGATCTTTTCATTACCACCAAGCTTTGGAATTCAGATCATGGACATGT
TCTGGAGGCCTGTAAGGACAGTTTAAAGAAGCTCCAACTGGATTATCTAG
ATCTCTACCTCGTCCATTTTCCTGTAGCCACAAAACACACTGGCGTTGGT
ACAACTGATAGTGCATTAGATGCGGATGGTGTGCTGGAGATAGACACAAC
TATATCATTGGAAACAACCTGGCATGCAATGGAGGATTTGGTTTCAATGG
GTTTAGTTCGAAGCATTGGGATCAGCAACTATGACATCTTTTTAACAAGA
GACTGCTTAGCTTACTCCAAAGTGAAGCCGGTGGTGAATCAGTTTGAAAC
TCACCCATACTTCCAACGTGATTCTCTTGTCAAGTTCTGTCAGAAGCATG
GGATATGTGTCACAGCTCATA
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