FC930976

Overview
NameFC930976
Unique NameFC930976
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930976 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11
Identity = 56/219 (25.57%), Postives = 103/219 (47.03%), Query Frame = 2
Query:   38 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEARTYSG 694
            L   LI +    I+   I +   N  P P    P+IG+L  + G+ P  +    LA++ G +  L LG  P+ ++SS E  ++   T+D    +R  +V  +L+          PYG  W++ R+    EL  S +L+   +++  E +  +K L    SE+A + + V +SK +  L  +I  ++  G+ F    +E + ++  +I+  + E  T  G
Sbjct:    6 LCLFLITFVSLTIVGCKIKRSIWNLPPSPPKL-PVIGNLHQV-GELPH-RSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKL----SESAVDQSPVDLSKTLFWLAASILFRVAFGQSF----HESEFTDTDKIDELVFETETAQG 213          
BLAST of FC930976 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11
Identity = 61/241 (25.31%), Postives = 106/241 (43.98%), Query Frame = 2
Query:   17 FSPPIF-ELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKL-IAGKRFSAKDYEEQGSEAWRINRAIKEARTYSGFSSWEMHTMA*MD 733
            FS PI  ELL  L++     ++   + +  KN  P P    P++G++  L G  P  + L  L+ KYGP+ ++ LG    ++V S E  ++    +D    TR K+   K   YD        +G Y+RD+RK+   EL S  R    +++R  E+   +       S  +       ++K +   T  ++  L   G     + + E  +EA R+      A  + GF  W +  ++ +D
Sbjct:    4 FSFPISTELLPWLLLLLIPPLLIFFLLRSPKNLPPGPPRL-PILGNIHQL-GSLPH-RSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVDLTANLAKFVASFTCRMAFGLSFQGSGMDNETFLELFTEANRVIGKFAAADIFPGF-GWILDRISGLD 240          
BLAST of FC930976 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11
Identity = 42/136 (30.88%), Postives = 68/136 (50.00%), Query Frame = 2
Query:   80 AKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGP--IYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEV 481
            A S   ++    P P G  P+IGHL L+     +      L  KYG   +  +++G  P ++VS+ +  +    T+D +LA+R +     ++ Y++   A APYG YWR  RK+  T LLS+  +   +  R  EV
Sbjct:   45 ATSPKWKQHRLPPTPPGKLPIIGHLHLIGSHPHVS--FRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEV 178          
BLAST of FC930976 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11
Identity = 53/216 (24.54%), Postives = 98/216 (45.37%), Query Frame = 2
Query:   38 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEART 685
            LL    ++     + K +   +    P P+G  P+IG+L  L     +      L+ ++GP+  LR G  P++++SS E  K    + D    +R K+VA  L   +    A A YG  WR+++K+   EL +  + +  +++R  E D  +K L    S+++     V + K     T  I  ++  G+ F   D+ +      R+   ++E+ T
Sbjct:    6 LLCFFFLFPLLLTLFKKLLPSKWKLPPGPTGL-PIIGNLHQLG--RLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKL----SKSSQTQTLVDLRKAFFSFTAGIIFRVSFGQNFRECDFIDMD----RLEELVQESET 210          
BLAST of FC930976 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.122e-11
Identity = 55/203 (27.09%), Postives = 92/203 (45.32%), Query Frame = 2
Query:   29 IFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQ 637
            IF LL L     +     K+ + R     P    + P+IGHL L+    PI +    ++ KYGP+  LR    PI++VSS     + F   D  +++R      + +   ++ F   PYG Y + ++K    +LL    L+  +++R  E++ F K L     + A     V I     +LT N   K+I G+  S ++ E +
Sbjct:   14 IFLLLCLFSRLSYDLFFRKTKDSRAGCALPPSPPSLPIIGHLHLILFV-PIHQSFKNISSKYGPLLHLRFFNFPIVLVSSASTAYEIFKAQDVNVSSRPPPPIEESLILGSSSFINTPYGDYSKFMKKFMVQKLLGPQALQRSRNIRADELERFYKTLL----DKAMKKQTVEIRNEAMKLTNNTICKMIMGRSCSEENGEAE 211          
BLAST of FC930976 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.182e-11
Identity = 36/120 (30.00%), Postives = 58/120 (48.33%), Query Frame = 2
Query:   98 REKNTAPEPSGAWPLIGHLPLL--NGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLE 451
            +  N  P P  AWP++GHLP L      P    +  +A KYGP+  L+ G H  +  S+ E   +   TND++L+ R  +   ++  + +     +    YW+  RKI  TE+ S   L+
Sbjct:   24 KHTNLPPSPP-AWPIVGHLPDLISKNSPPFLDYMSNIAQKYGPLIHLKFGLHSSIFASTKEAAMEVLQTNDKVLSGRQPLPCFRIKPHIDYSILWSDSNSYWKKGRKILHTEIFSQKMLQ 142          
The following BLAST results are available for this feature:
BLAST of FC930976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
C71BH_ARATH1.850e-1125.57Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH1.850e-1125.31Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71C1_MAIZE3.156e-1130.88Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71B8_ARATH3.156e-1124.54Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
THAD_ARATH4.122e-1127.09Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
C80A1_BERST9.182e-1130.00Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC34100A11EF PostHarvP1 Citrus clementina cDNA clone C34100A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930976 ID=FC930976; Name=FC930976; organism=Citrus clementina; type=EST; length=738bp
GATGGATTCTACTTCTTTCAGCCCACCAATTTTTGAGCTCTTATCTCTGC
TAATTGTCTATTGTTTTTGGAGAATCATAGCAAAATCTATAAACAAAAGA
GAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGGCCA
TTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAGCAT
TGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCATCCC
ATATTGATTGTGAGCAGTTGGGAAATTGTGAAGGATTGCTTCACTACCAA
TGACAGAATTCTGGCTACTAGGGCAAAAATTGTAGCAGGCAAGTTGATGG
GTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCCGTACTGGCGT
GATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCTTGA
ATTGCTGAAGCACGTTCGCTACTCAGAAGTTGACACTTTCATCAAAGATT
TGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTGATC
AGCAAGTTAATCGAGCAGTTGACTTTCAATATAAGCCTGAAACTGATAGC
TGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCGAGGCTT
GGCGTATCAATAGAGCAATAAAAGAAGCACGCACCTATTCGGGGTTTTCA
TCTTGGGAGATGCATACCATGGCTTGAATGGATTGACT
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