FC930980

Overview
NameFC930980
Unique NameFC930980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6173 contig Ccv1_Contig6173:25..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.500e-68
Identity = 131/205 (63.90%), Postives = 156/205 (76.10%), Query Frame = 3
Query:  102 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            EL   A  I   GKGILAADES GT+GKRL+ I +EN + +RR  R+LLF T P   +++ G+I F ET+YQKT  G PFV ++K+ G+L GIKVDKG V LAGTNGE TTQGLDGL +RC +Y + GA FAKWR VLKI PN PS+L+I ENAN LARYA ICQ+NGLVPIVEPEIL DG HD+K C  +TE+VLAA YKAL+D
Sbjct:   15 ELADIAQRIVASGKGILAADESVGTMGKRLTQIGLENTDEHRRFYRQLLFTTDPSIKEHIGGIIFFHETMYQKTDGGVPFVKLVKDNGILVGIKVDKGVVPLAGTNGEGTTQGLDGLAERCAQYKKDGADFAKWRCVLKISPNTPSRLSIVENANVLARYATICQQNGLVPIVEPEILPDGDHDLKTCQYITEKVLAATYKALSD 219          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 7.797e-68
Identity = 132/205 (64.39%), Postives = 156/205 (76.10%), Query Frame = 3
Query:  102 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQK   G PF  ++K+ G++ GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR+VLKI    PS+LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAACYKAL+D
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFTADERMDKCIGGVIFFHETLYQKADDGTPFAKMIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISETSPSELAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAACYKALSD 219          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 254.988 bits (650), Expect = 2.963e-67
Identity = 130/200 (65.00%), Postives = 153/200 (76.50%), Query Frame = 3
Query:  117 AAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            A  I   GKGILAADES GT+G RL  INVEN E NRRA RE+LF +  ++ + + GVILF ETLYQK ++GKPF  ++KE G++ GIK+D GT  LAGTNGETT QGLD L +RC +Y + GA F KWRAVLKI    PSQLAI ENAN LARYA ICQ+NGLVPIVEPE+L DG HD+++C  VTE+VLAA YKALND
Sbjct:   20 AQRIVASGKGILAADESVGTMGNRLQRINVENTEENRRAFREILFSSDASISKSIGGVILFHETLYQKDSSGKPFPAIIKEKGMVVGIKLDAGTAPLAGTNGETTIQGLDKLAERCAQYKKDGADFGKWRAVLKISSTTPSQLAIQENANTLARYASICQQNGLVPIVEPEVLPDGDHDLQRCQYVTEKVLAAVYKALND 219          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.620e-67
Identity = 131/205 (63.90%), Postives = 155/205 (75.61%), Query Frame = 3
Query:  102 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQ T  G  F  ++K+ G++ GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR+VLKI    PS+LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAACYKAL+D
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFSADERIDKCIGGVIFFHETLYQNTDDGTNFAQLIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISDTTPSELAIMENANVLARYASICQQNGIVPIVEPEILPDGEHDLKRCQYVTEKVLAACYKALSD 219          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.126e-66
Identity = 134/205 (65.37%), Postives = 152/205 (74.15%), Query Frame = 3
Query:  102 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+D
Sbjct:   15 ELADIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSSLAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSD 219          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 1.920e-66
Identity = 134/205 (65.37%), Postives = 152/205 (74.15%), Query Frame = 3
Query:  102 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+D
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSD 219          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 252.292 bits (643), Expect = 1.920e-66
Identity = 134/205 (65.37%), Postives = 152/205 (74.15%), Query Frame = 3
Query:  102 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+D
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSD 219          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 1.920e-66
Identity = 134/205 (65.37%), Postives = 152/205 (74.15%), Query Frame = 3
Query:  102 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+D
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSD 219          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 1.920e-66
Identity = 134/205 (65.37%), Postives = 152/205 (74.15%), Query Frame = 3
Query:  102 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+D
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSD 219          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.531e-66
Identity = 133/205 (64.88%), Postives = 151/205 (73.66%), Query Frame = 3
Query:  102 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPI EPEIL DG HD+K+C  VTE+VLAA YKAL+D
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIVGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIAEPEILPDGDHDLKRCQYVTEKVLAAVYKALSD 219          
The following BLAST results are available for this feature:
BLAST of FC930980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF1_LAMJA3.500e-6863.90Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOC_CARAU7.797e-6864.39Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDOB_CHICK2.963e-6765.00Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALDCB_DANRE8.620e-6763.90Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDOA_RAT1.126e-6665.37Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALDOA_RABIT1.920e-6665.37Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALDOA_PONAB1.920e-6665.37Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_MOUSE1.920e-6665.37Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_HUMAN1.920e-6665.37Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDOA_PANTR9.531e-6664.88Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]

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Properties
Property NameValue
Genbank descriptionC34100B03EF PostHarvP1 Citrus clementina cDNA clone C34100B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930980 ID=FC930980; Name=FC930980; organism=Citrus clementina; type=EST; length=721bp
GTCTGCATAAAATTCGCTCTCTCTGTTTCTCCCTCTAACAAAACAAATTT
TCTATCTTCAAGTCGATCACCATGTCTTGCTTCAAGGGCAAATACGCCGA
TGAGCTCATTAAAAACGCTGCCTACATTGGCACCCCTGGAAAGGGTATCC
TTGCTGCTGATGAGTCAACAGGCACCATTGGCAAGCGTCTATCCAGCATC
AATGTTGAGAATGTTGAGTCAAACAGGCGTGCTCTCCGCGAGCTCCTTTT
CTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGTCATCCTCTTCGAGG
AGACCCTCTACCAGAAGACTGCTGCTGGCAAGCCCTTTGTTGATGTCTTG
AAGGAGGGTGGAGTCCTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGA
GCTTGCTGGTACCAATGGTGAGACCACCACCCAGGGTCTTGATGGCCTCA
CCCAGCGCTGCCAGAAATACTATGAAGCTGGTGCTCGTTTTGCCAAATGG
CGTGCTGTTCTTAAGATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAA
TGAGAATGCCAATGGCCTGGCCCGATATGCTATCATCTGCCAGGAGAATG
GCCTTGTTCCCATTGTTGAACCTGAGATCCTTGTTGACGGTCCCCATGAC
ATCAAGAAGTGTGCTGATGTGACCGAGCGTGTTCTTGCTGCATGCTACAA
GGCTCTGAATGACACCATGTC
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