FC930980

Overview
NameFC930980
Unique NameFC930980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6173 contig Ccv1_Contig6173:25..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.879e-59
Identity = 111/203 (54.68%), Postives = 142/203 (69.95%), Query Frame = 3
Query:   99 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKAL 707
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG PF   + E G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY+ GARFAKWRAV+ IG + PS + I+ N + LARYA +CQE GLVP+VEPE+++DG HDI    +VTE  L + + AL
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAGVPFPKYMAEHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNAL 206          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.879e-59
Identity = 123/207 (59.42%), Postives = 148/207 (71.50%), Query Frame = 3
Query:   99 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGL-ARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            DEL   A  I TPGKGILAADESTG++ KRL+SI +EN E NRR  R+LLF     L +Y+SGVI+F ET YQKT  GKPF  +L+E G++PGIKVDKG V +AGT GE TTQGLD L  RC +Y + GA+FAKWR V KI    PS  A+ E A+ L +RYA ICQ+NGLVPIVEPEIL DG H + +   +TE VL+  Y ALN+
Sbjct:   14 DELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNE 220          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.640e-59
Identity = 110/203 (54.19%), Postives = 142/203 (69.95%), Query Frame = 3
Query:   99 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKAL 707
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG PF   + + G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY+ GARFAKWRAV+ IG + PS + I+ N + LARYA +CQE GLVP+VEPE+++DG HDI    +VTE  L + + AL
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAGVPFPKYMADHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNAL 206          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.248e-57
Identity = 122/212 (57.55%), Postives = 146/212 (68.87%), Query Frame = 3
Query:   78 CFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            C  GKY +ELIK A  + + G+GILA DES  T GKRL SI VEN E NRRA RELL   PG  QY+SG ILFEETLYQ TA+GK FVDV+KE  ++PGIKVDKG V    T   +   GLDG T   + YY+AGARFAKWR+V+ I P+ PS + +   A GLARYA I Q  GLVPIVEPE+L+DG HDI +C +V E + A  +K + D
Sbjct:   25 CAPGKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTSAAE-YYKAGARFAKWRSVVSI-PHGPS-IMLPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMAD 232          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 4.448e-47
Identity = 101/210 (48.10%), Postives = 128/210 (60.95%), Query Frame = 3
Query:   84 KGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELA-GTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALN 710
            K  Y  ELI+ A  +  PGKG+LAADESTG+  KR + I + N   +RR  R L+    G  QY+SGVIL +ET+YQK   G+ F   L+  GV+PGIK D G   L  G  GE  T GLDG  +R +KYY  G RF KWR V KI     S+  +  NA  LARYAI+ Q  GLVPIVEPE+++DG HDI+ C  V++ V +    AL+
Sbjct:   19 KTPYEAELIETAKKMTAPGKGLLAADESTGSCSKRFAGIGLSNTAEHRRQYRALMLECEGFEQYISGVILHDETVYQKAKTGETFPQYLRRRGVVPGIKTDCGLEPLVEGAKGEQMTAGLDGYIKRAKKYYAMGCRFCKWRNVYKIQNGTVSEAVVRFNAETLARYAILSQLCGLVPIVEPEVMIDGTHDIETCQRVSQHVWSEVVSALH 228          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.763e-41
Identity = 86/191 (45.03%), Postives = 123/191 (64.40%), Query Frame = 3
Query:  138 GKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALN 710
            GKGILAADE+  T+G+R   + + N E NRR  RE+LF T G  +Y+ GVIL +ET  Q + +G P  ++LK+ G+  GIK+DKG ++      E  + GL+ L  RC+      A FAKWR++       PS+  INEN + LA+YAIICQ+NGLVPIVEPE+ ++G + +K+  +VT ++L+   K LN
Sbjct:   21 GKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQTSGSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLN 209          
The following BLAST results are available for this feature:
BLAST of FC930980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF1_XYLFT3.879e-5954.68Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_CAEEL3.879e-5959.42Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF1_XYLFA8.640e-5954.19Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_CHLRE1.248e-5757.55Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_TRYBB4.448e-4748.10Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF_ENCCU4.763e-4145.03Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionC34100B03EF PostHarvP1 Citrus clementina cDNA clone C34100B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930980 ID=FC930980; Name=FC930980; organism=Citrus clementina; type=EST; length=721bp
GTCTGCATAAAATTCGCTCTCTCTGTTTCTCCCTCTAACAAAACAAATTT
TCTATCTTCAAGTCGATCACCATGTCTTGCTTCAAGGGCAAATACGCCGA
TGAGCTCATTAAAAACGCTGCCTACATTGGCACCCCTGGAAAGGGTATCC
TTGCTGCTGATGAGTCAACAGGCACCATTGGCAAGCGTCTATCCAGCATC
AATGTTGAGAATGTTGAGTCAAACAGGCGTGCTCTCCGCGAGCTCCTTTT
CTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGTCATCCTCTTCGAGG
AGACCCTCTACCAGAAGACTGCTGCTGGCAAGCCCTTTGTTGATGTCTTG
AAGGAGGGTGGAGTCCTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGA
GCTTGCTGGTACCAATGGTGAGACCACCACCCAGGGTCTTGATGGCCTCA
CCCAGCGCTGCCAGAAATACTATGAAGCTGGTGCTCGTTTTGCCAAATGG
CGTGCTGTTCTTAAGATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAA
TGAGAATGCCAATGGCCTGGCCCGATATGCTATCATCTGCCAGGAGAATG
GCCTTGTTCCCATTGTTGAACCTGAGATCCTTGTTGACGGTCCCCATGAC
ATCAAGAAGTGTGCTGATGTGACCGAGCGTGTTCTTGCTGCATGCTACAA
GGCTCTGAATGACACCATGTC
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