FC930984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPZ_RABIT (T-complex protein 1 subunit zeta OS=Oryctolagus cuniculus GN=CCT6 PE=2 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 6.004e-15 Identity = 62/252 (24.60%), Postives = 122/252 (48.41%), Query Frame = 1 Query: 16 QLAVDAVMRLKGST---NLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQP---KRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINC---------FVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 + VD+++ +K +L ++I++ S D+ L G +LD G P KR+E+A IL N +++ +K ++ + S + ++ AE++ + ++V+KI+ +N++ I F + A GI+A+ A +ERL L GG ++ D+ LGH L+ E +GE+K ++ T++++G + H L + + ++ D L + ++D V+ G G E+ M Sbjct: 170 EAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDH--GARHPDMKKRVEDAYILTCNVSLEYEKTEV-NSGFFYKSAEEREKLVKAERKFIEDRVKKIVELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIVALRRAKRRNMERLTLACGGVPLNSLDDLNPDCLGHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAM 418
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.004e-15 Identity = 64/247 (25.91%), Postives = 119/247 (48.18%), Query Frame = 1 Query: 19 LAVDAVMRLKGSTNLESI--------QIIKKPGGSLKDSFLDEGFILDKKIGIGQPKR-IENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKV---QKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 LA+ AV + NL+ + ++ K PGG+L+DS + +G + +K I + +R I+N ++++ + ++ K G + M K ++ A +Q+M E I+ H + + + + + + + I R++ V+G I + + + +G C L E +IG++ + E +AC+I+LRGAS VL+E ER+LHD L V + +++ GGG EM Sbjct: 177 LALKAVRTIMRGGNLQKLNLEIKRYAKVEKIPGGTLEDSVVLDGVMFNKDITHPKMRRFIKNPRVILLDCPLEYKK----GESMTNLEMMKETDMTDALQQEMEELALMCNDILKHKPDVVITEKGVSDLAQHYLLKQNVSVIRRVRKTDNNRISRVSGATIVNRPEEIQESDVGKKCGLFEVKLIGDEYFTFMTECENPEACSIILRGASKDVLNEMERNLHDCLAVAKNIFVNPKLVPGGGAIEM 419
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPZ_DICDI (T-complex protein 1 subunit zeta OS=Dictyostelium discoideum GN=cct6 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 50/191 (26.18%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 160 PKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINC--------FVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGG 708 PK++ N IL N +++ +K ++ + D +++ I+G K + Q I C +N++ I ++ A AGI+ + A +ERL L GG ++ ++ LGH L+ E +GE+K GV+ +CT++++G + H +++ + +L D L + T+ D V+ GGG Sbjct: 224 PKKLTNCFILTCNVSLEYEKTEVNANFLYKDHETRSRMIDGEHKLVAAKCRQIIELKNHVCDTPDKNFVVINQKGIDPICLDMLAKAGIMGLRRAKRRNMERLTLACGGTAMNSLEDLTPDCLGHADLVYEQTLGEEKYTFVEGVKNPFSCTVLIKGPTKHQIEQIKDALRDGLRAVKNTIEDKCVVPGGG 414
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 63/252 (25.00%), Postives = 122/252 (48.41%), Query Frame = 1 Query: 16 QLAVDAVMRLKGS---TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQP---KRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKII---------AHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 + VD+V+ ++ +L ++I++ S D+ L G +LD G P KR+E+A IL N +++ +K ++ A S + ++ AE++ + ++V KII + +N++ I F + A GI+A+ A +ERL L GG ++ ++ LGH L+ E +GE+K + ++ T+++RG + H L + + ++ D L + + D V+ G G E+ + Sbjct: 169 EAVVDSVLAVRKPGEPIDLHMVEIMEMKHKSETDTTLIRGLVLDH--GARHPDMKKRVEDAYILTCNVSLEYEKTEV-SAGFFYKSAEEREKLVKAERKFIEDRVSKIIDLKRRVCGDSDKGFIVINQKGIDPFSLDALAKEGIVALRRAKRRNMERLTLACGGTAMNSVEDLTPDCLGHAGLVYEYTLGEEKYTFIEKCDNPRSVTLLIRGPNKHTLTQIKDAVRDGLRAVKNAIEDGCVIPGAGALEVAV 417
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPW_BOVIN (T-complex protein 1 subunit zeta-2 OS=Bos taurus GN=CCT6B PE=2 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 66/247 (26.72%), Postives = 122/247 (49.39%), Query Frame = 1 Query: 22 AVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQP---KRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKII-------AHGINCFV--NRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 +V A+ R +L ++I++ S D+ L +G +LD G P KR+++A IL N +++ +K ++ + K ++ AE++ + ++VQKII A FV N++ I F + A GILA+ A +ERL+L GG ++ ++ LGH L+ E +GE+K ++ T++++G + H L + + ++ D L + + D V+ G G E+V+ Sbjct: 175 SVLAIRRPNYPIDLFMVEIMEMKHKSETDTKLIKGLVLDH--GARHPDMKKRVDDAFILTCNVSLEYEKTEVSSGFFYKTAEEKEKLVK-AERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPFSLDALAKHGILALRRAKRRNMERLSLACGGVAVNSVEDLSVDCLGHAGLVYEYTLGEEKYTFIEDCINPRSVTLLVKGPNKHTLTQIKDAVRDGLRAIKNAIEDGCVVPGAGAVEVVI 418
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPW_HUMAN (T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1 SV=4) HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14 Identity = 65/252 (25.79%), Postives = 125/252 (49.60%), Query Frame = 1 Query: 16 QLAVDAVMRLKGS---TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQP---KRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKII-------AHGINCFV--NRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 ++ VD+V+ ++ +L ++I++ D+ L +G +LD G P KR+E+A IL+ N +++ +K ++ + K ++ AE++ + ++VQKII A FV N++ I F + A GI+A+ A +ERL+L GG ++F++ LGH L+ E +GE+K + T++++G + H L + + ++ D L + + D ++ G G E+ M Sbjct: 170 EVVVDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDH--GARHPDMKKRVEDAFILICNVSLEYEKTEVNSGFFYKTAEEKEKLVK-AERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAM 418
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14 Identity = 66/246 (26.83%), Postives = 119/246 (48.37%), Query Frame = 1 Query: 19 LAVDAVMRLK-----GSTNLES---IQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKR-IENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 LA+DAVM + G + ++ ++ K PGG + D + G +L+K + + KR I+N +I++ + +++ K + V + + + + E++ ++ + II + + + + + F GI + R+A ++G I S D + +G C L E IG++ + +ACTI+LRGAS +L+E ER+L DAL V V D R++ GGG EM + Sbjct: 173 LALDAVMTVHIQEEDGRSEIDIKRYAKVEKIPGGDISDCRVIRGVMLNKDVTHPKMKRMIKNPRIVLLDCSLEYKKGES-DTMVDITNEDDFSALLKIEEEYVQRICEDIIKLKPDLVFTEKGVSDLAQHFFVKKGITCLRRLKKSENNRIARISGATIVSRTDELQESDIGTGCGLFEIRKIGDEYFTFLEDCKEPKACTILLRGASKDILNEVERNLTDALNVARNIVLDPRLVPGGGAIEMAL 417
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14 Identity = 54/227 (23.79%), Postives = 104/227 (45.81%), Query Frame = 1 Query: 49 GSTNLESIQIIKKPGGSLKDSFLDEGFILDKK-IGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 G + + ++++ + G S + L EG +LDK+ + P+ + +A + V + +D K ++ + S+ + AE ++R + + G++ + I + ADAGILA + LA TG + + + + LG + G+D L G +A T+ LRG + HV+ E ER++ DA+ V+ ++ V+ G G E+ + Sbjct: 191 GVFHRDDVRVLTRTGASSSATELVEGVVLDKEPVNENMPRSVSDATVAVLDMKLDVRKSEV-DTEYNITSVDQLTAAIDAEDSELRGYAKALADAGVDVVFCTKSIDDRVAGFLADAGILAFKSVKKSDARALARATGAKRLGSLSDLDESDLGRVDAVSIRSFGDDDLAFVEGGAAAKAVTLFLRGGTEHVVYELERAIEDAVDVVVAAIDKGGVVPGAGATEIAI 416
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPQ_SCHPO (Probable T-complex protein 1 subunit theta OS=Schizosaccharomyces pombe GN=cct8 PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13 Identity = 56/222 (25.23%), Postives = 107/222 (48.20%), Query Frame = 1 Query: 58 NLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVE-MGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 N+++I+++K G SL +S + +G + ++ G R + AK+ V + +D + + G V + + + + E+ + +++I G+ V + + IL I + RL V G + P ++G ++E I IG D++ F VE + + TIVLRGA+ LD+ ER++ D + ++ V D+R++FG G +M Sbjct: 198 NVDNIRVVKIMGSSLYNSQVVKGMVFPREPE-GTVTRSKEAKVAVFSCPLDISQTETKGT-VLLHNAQEMLDFSKGEENLIESHIKEIYDAGVRVVVTSGNVNDLVLHYLNRFEILVIRVPSKFELRRLCRVVGATPLARMGVPMPEEMGSVDVVETIEIGGDRVTVFRQVEDITRTATIVLRGATKTYLDDLERAIDDGVNIVKALVKDNRLIFGAGASDM 417
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPG_ENCCU (T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi GN=CCT3 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13 Identity = 67/247 (27.13%), Postives = 124/247 (50.20%), Query Frame = 1 Query: 13 GQLAVDAVMRL----KGSTNLES-IQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKR-IENAKILVANTAMDTDKVKIYGARV--RVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLG-HCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 G LA++AV ++ + +L++ +++ K GG+L +S + +G +++K I Q +R IEN +I++ + ++ K + + + ++A EIE ++++RE ++II + V + I + + + I + I RL+ V G S ++ E +G C L E I GE+ FS +AC++V+RG + +LDE ER+ DA+ V ++ GGG EM M Sbjct: 170 GNLALEAVKKVYVKEENKCDLKNNMKVEKVLGGNLMESEVVDGVLINKDIIHPQMRRVIENPRIVIIESPLEYKKGESQTNYEFSKENDFTRALEIE---EEQVREMCERIIGVRPDIVVCEKGISDLALSILFENNITGLRRLKKTDISRLSKVCGARSVSRPEDLEERHVGVSCGLFEYIKYGEEYYCKFSRCAHPKACSVVIRGPTKDILDELERNFMDAVKVAKSIFISPKLCPGGGAAEMAM 413 The following BLAST results are available for this feature:
BLAST of FC930984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930984 ID=FC930984; Name=FC930984; organism=Citrus clementina; type=EST; length=727bpback to top |