FC930984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29 Identity = 75/238 (31.51%), Postives = 134/238 (56.30%), Query Frame = 1 Query: 16 QLAVDAVMRLK--GSTNLESIQIIKKPGGSLKDSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 +L VDAV +++ G + I+I KK G ++ DS L +G I+DK ++ G PK++ENAKI + N ++ + ++ A +R+ S+ E+Q +R+ V I+ G N ++ I + + A AG+LA+ +E+L+ TG I + ++ LG ++ E I +++I + +A TI++RG++ HV+ E ER++ DA+ V++ TV D +V+ GGG PE+ Sbjct: 173 ELIVDAVKQVEEDGEVEKDHIKIEKKEGAAVDDSTLVQGVIIDKERVHPGMPKKVENAKIALLNCPIEVKETEV-DAEIRITDPSQMQAFIEQEEQMIRDMVNSIVDTGANVLFCQKGIDDLAQHYLAKAGVLAVRRVKKSDMEKLSKATGANIVTNIEDLSPEDLGEAGVVSEKKISGEEMIFVEECKEPKAVTILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGGGAPEI 409
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.511e-29 Identity = 71/220 (32.27%), Postives = 124/220 (56.36%), Query Frame = 1 Query: 64 ESIQIIKKPGGSLKDSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 + I++ KK GG L+D+ L +G ++DK ++ G P+R+ENAKI + N ++ + + A +R+ + E++ + E V KI G N ++ I + + A GILA+ +++LA TG I + D+ LG +++EE + DK+I G + +A TI++RG + HV+DEAER++ DA+ V++ + D +V+ GGG PE+ Sbjct: 200 DHIKLEKKEGGGLEDTELVKGMVIDKERVHPGMPRRVENAKIALLNCPIEVKETET-DAEIRITDPEQLQAFIEEEERMLSEMVDKIAETGANVVFCQKGIDDLAQHYLAKKGILAVRRVKKSDMQKLARATGARIVTNIDDLSEEDLGEAEVVEEKKVAGDKMIFVEGCKDPKAVTILIRGGTEHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEV 418
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29 Identity = 77/242 (31.82%), Postives = 135/242 (55.79%), Query Frame = 1 Query: 16 QLAVDAVMRL------KGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 +LAV+AV + K ++++I++ KK GG+++D+ L G ++DK++ G PKRIENAKI + N A++ + + A +R+ S + E++ ++E V KI G N ++ I + + A GILA+ +E+LA TG +I + + LG +L+EE + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ + D +++ GGG E+ Sbjct: 176 KLAVEAVKLVAEEKDGKLKVDIDNIKLEKKEGGAVRDTRLIRGVVIDKEVVHPGMPKRIENAKIALINDALEVKETET-DAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEI 416
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29 Identity = 78/242 (32.23%), Postives = 136/242 (56.20%), Query Frame = 1 Query: 16 QLAVDAVMRLK---GST---NLESIQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 ++AV+AV ++ G T +L++I+ KK GGS+KD+ L +G ++DK++ G PKR+E AKI + N A++ + + A +R+ S + E++ +RE V KI G N ++ I + + A GI+A+ +E+LA TG +I + + LG +L+E+ + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ V D +++ GG PE+ Sbjct: 176 EIAVEAVKQVAEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETET-DAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEI 416
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29 Identity = 78/242 (32.23%), Postives = 136/242 (56.20%), Query Frame = 1 Query: 16 QLAVDAVMRLK---GST---NLESIQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 ++AV+AV ++ G T +L++I+ KK GGS+KD+ L +G ++DK++ G PKR+E AKI + N A++ + + A +R+ S + E++ +RE V KI G N ++ I + + A GI+A+ +E+LA TG +I + + LG +L+E+ + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ V D +++ GG PE+ Sbjct: 176 EIAVEAVKQVAEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETET-DAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEI 416
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.246e-28 Identity = 73/217 (33.64%), Postives = 122/217 (56.22%), Query Frame = 1 Query: 61 LESIQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGG 708 L+ I+I KK GGS++DS L G +LDK++ G P+R+E AKI V + A++ +K +I A++ + S + E + +++ V K+ + G N + ++ I + + A GILA+ IE+L G I S+ + LG+ +L+EE +G DK++ G + +A I+LRG++ LDEAERS++DAL L + ++ GGG Sbjct: 203 LDLIKIDKKKGGSIEDSMLVHGLVLDKEVVHPGMPRRVEKAKIAVLDAALEVEKPEI-SAKISITSPEQIKAFLDEEAKYLKDMVDKLASIGANVVICQKGIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRVGNDKMVFIEGAKNPKAVNILLRGSNDMALDEAERSINDALHSLRNVLMKPMIVAGGG 418
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28 Identity = 74/224 (33.04%), Postives = 127/224 (56.70%), Query Frame = 1 Query: 52 STNLESIQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 + +L+ I+I KK GGS++DS L +G +LDK++ G P+R+ AKI V + A++ +K +I A++ + S + E + +++ V K+ + G N + ++ I + + A GILA+ IE+L G I S+ + LG+ +L+EE +G DK++ G + +A I+LRG++ LDEAERS++DAL L + + +L GGG E+ Sbjct: 199 NVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKPEI-SAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQKGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRVGNDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIEL 421
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.126e-28 Identity = 74/224 (33.04%), Postives = 127/224 (56.70%), Query Frame = 1 Query: 52 STNLESIQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 + +L+ I+I KK GGS++DS L +G +LDK++ G P+R+ AKI V + A++ +K +I A++ + S + E + +++ V K+ + G N + ++ I + + A GILA+ IE+L G I S+ + LG+ +L+EE +G DK++ G + +A I+LRG++ LDEAERS++DAL L + + +L GGG E+ Sbjct: 199 NVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKPEI-SAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQKGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPDDLGYAELVEERRVGNDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIEL 421
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.626e-28 Identity = 76/242 (31.40%), Postives = 133/242 (54.96%), Query Frame = 1 Query: 16 QLAVDAVMRL------KGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 ++AV+AV ++ K +L++I+ KK G S+ ++ L G ++DK++ G PKR+ENAKI + N A++ + + A +R+ S + E++ +RE V KI G N ++ I + + A GI+A+ +E+LA TG +I + + LG +L+E+ + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ V D ++L GG PE+ Sbjct: 176 EIAVEAVRQVAEKVGDKYKVDLDNIKFEKKEGASVHETQLIRGVVIDKEVVHPGMPKRVENAKIALINDALEVKETET-DAEIRITSPEQLQAFLEQEERMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEI 416
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28 Identity = 72/233 (30.90%), Postives = 129/233 (55.36%), Query Frame = 1 Query: 22 AVDAVMRLKGS---TNLESIQIIKKPGGSLKDSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGG 708 AV +V L+ + ++IQ++KK GG++ D+ L G I+DK K+ G P +++AKI + + ++ K + + +R++ S + E+ +RE V KI + G N + ++ I + + + AGI A+ +++LA TG I ST D S LG + +E++ +GED + +G + +A +I++RG + HV+DE ERS+ D+L V++ + D GGG Sbjct: 179 AVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPE-FDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGG 410 The following BLAST results are available for this feature:
BLAST of FC930984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930984 ID=FC930984; Name=FC930984; organism=Citrus clementina; type=EST; length=727bpback to top |