FC930984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.432e-26 Identity = 73/242 (30.17%), Postives = 132/242 (54.55%), Query Frame = 1 Query: 16 QLAVDAVMRL------KGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 +LAV+AV ++ K +L++I+ KK G +++S L G ++DK++ + PKR+ENAKI + N A++ K + A++ + S + E++ +++ V I G N ++ I + + A GI+A+ +E+LA TG +I + + LG+ +++EE + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ + D VL GG PE+ Sbjct: 176 KLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTET-DAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEI 416
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.432e-26 Identity = 73/242 (30.17%), Postives = 132/242 (54.55%), Query Frame = 1 Query: 16 QLAVDAVMRL------KGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 +LAV+AV ++ K +L++I+ KK G +++S L G ++DK++ + PKR+ENAKI + N A++ K + A++ + S + E++ +++ V I G N ++ I + + A GI+A+ +E+LA TG +I + + LG+ +++EE + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ + D VL GG PE+ Sbjct: 176 KLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTET-DAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEI 416
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.432e-26 Identity = 73/239 (30.54%), Postives = 122/239 (51.05%), Query Frame = 1 Query: 16 QLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIG----QPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 ++ VDAVM L L+ I I K GG+L++S L G K QPK+ +N KI + N ++ K + A +RV ++ I AE + +K++KI G +++ I + + FAD + + ++R + GG I ++ + LGHC++ EE IG ++ F+G + CTI+LRG + ++E ERSLHDA+ ++ + + + V+ GGG EM Sbjct: 177 KMVVDAVMMLDELLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYKNPKIALLNVELEL-KAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHQSGAKVILSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALVPDVLGHCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEM 414
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.432e-26 Identity = 74/241 (30.71%), Postives = 130/241 (53.94%), Query Frame = 1 Query: 19 LAVDAVMRL----KGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIG--EDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 +AVDAV+ + + + E I++ K GGS+ D+ L +G ++DK + Q P RIENAKI + + K K ++ + S+S+ ++ EK+K +E ++ + G N + + + L + A+ IE +A+ T G I F++ S KLG ++ E+ G DK++ +A T+ +RG++ ++DEA+R+LHDALCV+ + D+RV++GGG E+ Sbjct: 190 IAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDDTKLVKGVVVDKDMSHPQMPHRIENAKIAILTCPFEPPKPKTKH-KLDITSVSEFEALQAYEKEKFQEMIKHVKDAGANLVICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATNGRIVPRFEDLSSDKLGSAGIVREVSFGTTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEI 429
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.788e-26 Identity = 73/242 (30.17%), Postives = 131/242 (54.13%), Query Frame = 1 Query: 16 QLAVDAVMRL------KGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 +LAVDAV ++ K +L++I+ KK G +++S L G ++DK++ + PKR+E AKI + N A++ K + A++ + S + E++ +++ V I G N ++ I + + A GI+A+ +E+LA TG +I + + LG+ +++EE + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ + D VL GG PE+ Sbjct: 176 KLAVDAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEGAKIALINEALEVKKTET-DAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEIVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEI 416
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.560e-26 Identity = 76/241 (31.54%), Postives = 129/241 (53.53%), Query Frame = 1 Query: 16 QLAVDAVMRL----KGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIG--EDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPE 717 ++AV+AV+ + + + E I++ K GG L+D+ L +G I+DK + PK++E+AKI + + K K ++ V S+ ++ EK+K E +Q+I G N + + + L + A+ IE +A+ TGG I F + KLG L++EI G +DK++ + +A TI +RG + +++EA+RSLHDALCV+ + D+RV++GGG E Sbjct: 187 EIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPRMPKKVEDAKIAILTCPFEPPKPKTKH-KLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAE 426
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.290e-25 Identity = 77/242 (31.82%), Postives = 127/242 (52.48%), Query Frame = 1 Query: 16 QLAVDAVMRL----KGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIG--EDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 ++AV+AV+ + + + E I++ K GG L+D+ L +G I+DK Q PK + NAKI + + K K ++ V S+ ++ EK+K E + +I G N + + + L G+ A+ IE +A+ TGG I F S KLG ++ EI G +DK++ + +A TI +RG + +++EA+RSLHDALCV+ + D+RV++GGG E+ Sbjct: 187 EIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKEVLNAKIAILTCPFEPPKPKTKH-KLDVTSVEDYKALQKYEKEKFEEMIAQIKETGANLAICQWGFDDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVREISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEI 427
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.290e-25 Identity = 76/242 (31.40%), Postives = 130/242 (53.72%), Query Frame = 1 Query: 16 QLAVDAVMRL----KGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIG--EDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 ++AV+AV+ + + + E I++ K GG L+D+ L +G I+DK Q PK++ +AKI + + K K ++ V S+ ++ EK+K E +++I G N + + + L G+ A+ IE +A+ TGG I F S KLG +++EI G +DK++ + +A TI +RG + +++EA+RSLHDALCV+ + D+RV++GGG E+ Sbjct: 187 EIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVVDAKIAILTCPFEPPKPKTKH-KLDVMSVEDYKALQKYEKEKFEEMIKQIKETGANLAICQWGFDDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVQEISFGTTKDKMLVIEKCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEI 427
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.290e-25 Identity = 76/251 (30.28%), Postives = 133/251 (52.99%), Query Frame = 1 Query: 16 QLAVDAVMRLK-----GSTN--LESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPK-RIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVK------LGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 Q+ VDAV +K G T +++++IIK G S S L G++L + Q K RIE AKI + + ++ ++++ G ++ V+ +I E + ++E+ +KII G N + + + + +AG++ + D + RLA TGG I +T PE + LG C + E +G++ I F G + +I++RGA+ ++DE +RSLHD+LCV+ +T+ V+ GGG E+ + Sbjct: 170 QIVVDAVESVKMTNLMGDTKYPIKNVKIIKSHGQSTLQSQLIRGYVLQTQRCDQQMKTRIEKAKIALLDFNLNKFRLQM-GIQILVNDPKNLEKIRFKECEILKERCKKIIEAGANVIITSAGMDDVATKYLVEAGVMGLRRVDKHDLRRLAKATGGTIVTTLATPEGDEVFEASYLGECAEVYEEAVGDNDCIFFKGTKRANCASIIIRGANEFMVDEVDRSLHDSLCVVKRTLESGYVVPGGGAVEIAL 419
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.200e-25 Identity = 68/234 (29.06%), Postives = 127/234 (54.27%), Query Frame = 1 Query: 22 AVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDK-KIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEM 720 AV AV+ G + + I+I KK G S+ ++ L G ++DK ++ PK+IENAKI + N ++ + + A +R+ +K E E++ +++ V I A G N ++ I + + A GILA+ +E+L+ TG + + + ++ LG ++EE I D +I + +A T+++RG + HV++E R++ DA+ V++ T+ D +++ GGG E+ Sbjct: 179 AVTAVVDESGKVDKDLIKIEKKEGASVDETELINGVLIDKERVSPQMPKKIENAKIALLNCPIEVKETET-DAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKGIDDLAQHYLAKEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAGDAMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEI 411 The following BLAST results are available for this feature:
BLAST of FC930984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930984 ID=FC930984; Name=FC930984; organism=Citrus clementina; type=EST; length=727bpback to top |