FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15247 contig Ccv1_Contig15247:1..734. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK2_ARATH (Serine/threonine-protein kinase WNK2 OS=Arabidopsis thaliana GN=WNK2 PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.474e-77
Identity = 134/223 (60.09%), Postives = 172/223 (77.13%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGEPLLIPQVPSFQNLNPNGAVM 669
            ++FY SW+D +  + NF+TE+FTSGTLR+YR ++ RV+IRAVK W +QIL+G+ YLH   PP+IHRDLKCDNIF+NG+ G++KIGDLGLAAILR S     V GTPEFMAPE+Y+E+YNELVD+Y+FGMCVLEM+T DYPYSEC++PAQIYKKVTSGK P AF+ ++D E R FV KCL NV+ RL A ELL DPFL  D  +  ++  +  +   +  G  +
Sbjct:   86 MKFYTSWVDTNNLSINFVTELFTSGTLRQYRLRHRRVNIRAVKQWCKQILKGLLYLHSRSPPIIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAVRCV-GTPEFMAPEVYDEEYNELVDVYAFGMCVLEMVTFDYPYSECTHPAQIYKKVTSGKKPEAFYLVKDPEVREFVEKCLANVTCRLTALELLQDPFLQDDNMDGFVMRPIDYYNGYDETGVFL 307          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK6_ARATH (Probable serine/threonine-protein kinase WNK6 OS=Arabidopsis thaliana GN=WNK6 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.194e-76
Identity = 135/213 (63.38%), Postives = 168/213 (78.87%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDA---GEPLLIPQV 630
            IRFY SWID   +T N ITE+FTSG+LR YRKK+ +V+++AVKNWARQIL G+ YLHG +PP+IHRDLKCDNIF+NG+ G++KIGDLGLA ++  +  A SVIGTPEFMAPELY+E+YNEL DIYSFGMC+LEM+T DYPY EC N AQIYKKV+SG  P +  R++D E ++F+ KCL   S+RL AKELLLDPFL  +      PL +P +
Sbjct:   90 IRFYNSWIDDKNKTVNIITELFTSGSLRHYRKKHRKVNMKAVKNWARQILMGLRYLHGQEPPIIHRDLKCDNIFINGNHGEVKIGDLGLATVMEQAN-AKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFDYPYCECKNSAQIYKKVSSGIKPASLSRVKDPEVKQFIEKCLLPASERLSAKELLLDPFLQLNGLTMNNPLPLPDI 301          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK4_ORYSJ (Probable serine/threonine-protein kinase WNK4 OS=Oryza sativa subsp. japonica GN=WNK4 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.354e-75
Identity = 131/212 (61.79%), Postives = 171/212 (80.66%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGEPLLIPQVPS 636
            ++FY  W+D  ++T N ITE+FTSG+LR+YR+K+ RVD++A+KNWARQ+LRG+ YLH H PP+IHRDLKCDNIFVNG+ G++KIGDLGLA ++  + +A SVIGTPEFMAPELY+E+Y+ELVDIYSFGMC+LEM T +YPYSEC+N AQI+KKV+ G  P A  +I + +A++F+ KCL   S+RL AKELL DPFL SD    L+  + PS
Sbjct:   87 MKFYNYWVDDQKKTINVITELFTSGSLRQYRQKHPRVDLKAIKNWARQVLRGLDYLHTHQPPIIHRDLKCDNIFVNGNHGEVKIGDLGLATVML-TPRAKSVIGTPEFMAPELYDENYDELVDIYSFGMCMLEMFTLEYPYSECTNAAQIFKKVSKGVKPAALAKITNIQAKQFIDKCLVPASERLSAKELLQDPFLCSDNSSVLVGTKFPS 297          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK8_ARATH (Serine/threonine-protein kinase WNK8 OS=Arabidopsis thaliana GN=WNK8 PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.865e-72
Identity = 129/203 (63.55%), Postives = 159/203 (78.33%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGE 609
            I+ + SW+D   +T N ITE+FTSG+LR YRKK+ +VD +A+KNWARQIL+G+ YLH  +PPVIHRDLKCDNIFVNG+ G++KIGDLGLA +L+    A SVIGTPEFMAPELYEE+YNELVDIYSFGMC+LEM+T +YPY+EC N AQIYKKVTS   P +  ++ D + R+F+ KCL   S R  A EL  DPFLA D G+
Sbjct:   91 IKLFYSWVDEKNKTINMITELFTSGSLRVYRKKHRKVDPKAIKNWARQILKGLNYLHSQNPPVIHRDLKCDNIFVNGNTGEVKIGDLGLATVLQ-QPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMVTCEYPYNECRNQAQIYKKVTSNIKPQSLGKVDDPQVRQFIEKCLLPASSRPTALELSKDPFLARDGGK 292          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK7_ARATH (Probable serine/threonine-protein kinase WNK7 OS=Arabidopsis thaliana GN=WNK7 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.426e-72
Identity = 129/213 (60.56%), Postives = 164/213 (77.00%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDA---GEPLLIPQV 630
            IRFY SWID   +T N ITE+FTSG+LR+YRKK+ +V+++AVK WARQIL G+ YLH  DPP+IHRD+KCDNIF+NG+ G++KIGDLGLA ++     A SVIGTPEFMAPELY+E+YNEL DIYSFGMC+LEM+T +YPY EC N AQIYKKV+SG  P +  +++D E  +F+ KCL   S+RL A+ELLLD FL  +      PL +P +
Sbjct:   90 IRFYNSWIDDKNKTVNIITELFTSGSLRQYRKKHRKVNMKAVKCWARQILTGLKYLHSQDPPIIHRDIKCDNIFINGNHGEVKIGDLGLATVME-QANAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYCECRNSAQIYKKVSSGIKPASLSKVKDPEVMKFIEKCLLPASERLSAEELLLDSFLNVNGLVMNNPLPLPDI 301          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK3_ORYSJ (Probable serine/threonine-protein kinase WNK3 OS=Oryza sativa subsp. japonica GN=WNK3 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.280e-70
Identity = 122/197 (61.93%), Postives = 151/197 (76.65%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFL 591
            +R +A W+D  RR  NF+TE+F SGTLR+YR+++ RV   AV+ W  QIL G+AYLH H PP+IHRDLKCDNIFVNG+ G++KIGDLGLAA  RG   A  V GTPEFMAPE+Y+E Y+EL D+YSFGMCVLEM+T DYPYSECSNP QIYK+V SG  P A +R+ D   R+F+ +CL   ++R  A+ELL DPFL
Sbjct:   96 VRLHAYWVDAPRRALNFVTELFVSGTLRQYRERHRRVSAAAVRRWCAQILDGLAYLHAHSPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAFRRGGGHARCV-GTPEFMAPEVYDESYDELADVYSFGMCVLEMVTLDYPYSECSNPIQIYKRVISGIKPAALYRVSDPVVRQFIERCLAPAARRPAARELLDDPFL 291          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK6_ORYSJ (Probable serine/threonine-protein kinase WNK6 OS=Oryza sativa subsp. japonica GN=WNK6 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.478e-69
Identity = 127/238 (53.36%), Postives = 167/238 (70.17%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASD---------AGEPLLIPQ------VPSFQNLNPNGAVM 669
            ++ YASW+D +RRT N +TE+FTSG LREYR K+ +VD++A++ WA+QIL G+ YLH   PP+IHRDLKCDNIF+NG+ G++KIGD GLA +++  ++  S+ GT EFMAPEL+ E+YNELVDIYSFGMC+LEM+T + PYSEC    QIYKK+T G  P A  +++DAE R F+  CL +VS RLPA ELL  PFL SD           EP+  P+       P F +L PN   +
Sbjct:   98 LKLYASWVDTNRRTVNIVTELFTSGNLREYRTKHKKVDMKAMRRWAKQILTGLEYLHSQKPPIIHRDLKCDNIFINGNHGKVKIGDFGLAMVMQ-QRKTRSIQGTIEFMAPELFGENYNELVDIYSFGMCMLEMVTCECPYSECKGFIQIYKKITEGVKPAALSKVKDAEVRGFIESCLASVSDRLPASELLKSPFLQSDDANHRSSNSVQEPVKFPENNFTKDEPIFVSLAPNNGTV 334          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK10_ARATH (Probable serine/threonine-protein kinase WNK10 OS=Arabidopsis thaliana GN=WNK10 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.640e-68
Identity = 123/203 (60.59%), Postives = 154/203 (75.86%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGE 609
            I+ + SW+D   ++ N ITE+FTSG+L  YRKK+ +VD +A+ NWARQIL+G+ YLH   PPVIHRDLKCDNIFVNG+ G++KIGDLGLAA+++    A SVIGTPEFMAPELYEE+YNELVDIYSFGMC+LEM+T +YPY EC N AQIYKKVTSG  P +  ++ D + ++F+ KCL     R  A ELL D  LA D  +
Sbjct:   78 IKLFYSWVDDHNKSINMITELFTSGSLTLYRKKHRKVDPKAIMNWARQILKGLHYLHSQTPPVIHRDLKCDNIFVNGNTGKVKIGDLGLAAVMQ-QPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMVTCEYPYRECRNQAQIYKKVTSGIKPQSLSKVDDPQVKQFIEKCLLPAPSRPTALELLKDQLLAVDGAK 279          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK11_ARATH (Probable serine/threonine-protein kinase WNK11 OS=Arabidopsis thaliana GN=WNK11 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.691e-65
Identity = 115/196 (58.67%), Postives = 148/196 (75.51%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPF 588
            I  Y  W D    T NFITE+ TSG LREYRKK+  V +RA+K W++QIL+G+ YLH HDP +IHRDL C NIFVNG++GQ+KIGDLGLAAI+  +  AHS++GTPEFMAPELYEE+Y E+VDIYS+GMCVLE+++ + PYSEC + A+IYK+V+ G  P A +++ D EA+ F+ KC+     R  A ELL DPF
Sbjct:   93 ITLYKVWRDERNNTLNFITEICTSGNLREYRKKHRHVSMRALKKWSKQILKGLDYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGKNHLAHSILGTPEFMAPELYEENYTEMVDIYSYGMCVLELVSLEIPYSECDSVAKIYKRVSKGLKPEALNKVNDPEAKAFIEKCIAQPRARPSAAELLCDPF 288          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK9_ORYSJ (Probable serine/threonine-protein kinase WNK9 OS=Oryza sativa subsp. japonica GN=WNK9 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.014e-63
Identity = 112/199 (56.28%), Postives = 147/199 (73.87%), Query Frame = 1
Query:    4 RFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASD 600
            + +ASW+D +++T N ITE+FTSG+L +YR+K+ +V+++A+K WA QIL G+ YLH   P +IHRDLKCDNIF+NG+ G++KIGD GLA  ++  QQ  S+ GT EFMAPEL    YNELVDIYSFGMC+LEM+T +YPYSEC   A I+KK+  GK P AF++I+DAE R F+  CL  V  R+ A ELL   FL  D
Sbjct:   96 KMFASWVDGEKKTVNIITELFTSGSLTQYRRKHKKVNMKAMKRWAIQILTGLEYLHSQKPAIIHRDLKCDNIFINGNHGKVKIGDFGLATFMQ--QQKKSIKGTLEFMAPELLTGHYNELVDIYSFGMCMLEMVTCEYPYSECQGMAHIFKKIDEGKKPAAFYKIKDAEVRSFIENCLAPVENRMSATELLKSSFLQDD 292          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
WNK2_ARATH1.474e-7760.09Serine/threonine-protein kinase WNK2 OS=Arabidopsi... [more]
WNK6_ARATH6.194e-7663.38Probable serine/threonine-protein kinase WNK6 OS=A... [more]
WNK4_ORYSJ2.354e-7561.79Probable serine/threonine-protein kinase WNK4 OS=O... [more]
WNK8_ARATH1.865e-7263.55Serine/threonine-protein kinase WNK8 OS=Arabidopsi... [more]
WNK7_ARATH5.426e-7260.56Probable serine/threonine-protein kinase WNK7 OS=A... [more]
WNK3_ORYSJ2.280e-7061.93Probable serine/threonine-protein kinase WNK3 OS=O... [more]
WNK6_ORYSJ1.478e-6953.36Probable serine/threonine-protein kinase WNK6 OS=O... [more]
WNK10_ARATH3.640e-6860.59Probable serine/threonine-protein kinase WNK10 OS=... [more]
WNK11_ARATH1.691e-6558.67Probable serine/threonine-protein kinase WNK11 OS=... [more]
WNK9_ORYSJ6.014e-6356.28Probable serine/threonine-protein kinase WNK9 OS=O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
back to top