FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK4_MOUSE (Serine/threonine-protein kinase Nek4 OS=Mus musculus GN=Nek4 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.098e-15
Identity = 50/159 (31.45%), Postives = 84/159 (52.83%), Query Frame = 1
Query:  124 VKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPA-KELLLDPFL 591
            V  W  QI   + YLH  +  ++HRDLK  N+F+      IK+GDLG+A +L      A ++IGTP +M+PEL+  + YN   D+++ G CV EM T  + ++     + +Y ++  GKLP    ++   E    +   L    +  P+ + +L  P++
Sbjct:  108 VVEWFVQIAMALQYLH--EKHILHRDLKTQNVFLT-RTNIIKVGDLGIARVLENHGDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVY-RIIEGKLP-PMPKVYSTELAELIRTMLSRRPEERPSVRSILRQPYI 261          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK5_ARATH (Serine/threonine-protein kinase Nek5 OS=Arabidopsis thaliana GN=NEK5 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.964e-15
Identity = 64/203 (31.53%), Postives = 94/203 (46.31%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVK--NWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKV---TSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFL 591
            + F  +W++        +T     G + E  KK   V     K   W  Q+L  + YLH +   V+HRDLKC NIF+      +++GD GLA  L+      SV+GTP +M PEL  +  Y    DI+S G C+ EM  +  P  +  + A +  KV   + G LP  +     A  +   G   +N   R  A E+L  P+L
Sbjct:   68 VEFKEAWVEKGCYVC-IVTGYCEGGDMAELMKKSNGVYFPEEKLCKWFTQLLLAVEYLHSNY--VLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLTSSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEM-AAYRPAFKAFDMAGLISKVNRSSIGPLPPCYSPSLKALIK---GMLRKNPEYRPNASEILKHPYL 262          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: DST2_DICDI (Serine/threonine-protein kinase dst2 OS=Dictyostelium discoideum GN=dst2 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.964e-15
Identity = 62/223 (27.80%), Postives = 116/223 (52.02%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFIT-EMFTSGTLRE-YRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEE-----DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQ-DAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEPLLIPQVPSFQ 642
            +++Y SW+  D     FI  E    G++ E Y++    ++   +    R+ L+G+ YLH  +  VIHRDLK  NI +    G +K+ D G++ +L  S + ++ IGTP +MAPE+ E       Y+   DI+S G+ ++E+  ++ P SE  +P ++  ++     P   ++     +   F+  CL+ + ++R  A ELL  PF+ +   + +L   +  ++
Sbjct:   78 VKYYGSWVKGDEL---FIAMECCGGGSITEIYQELNIPLNESQIAYVCRETLKGLEYLHHTN--VIHRDLKGANILLT-ESGDVKLADFGVSGLLDKSSKRNTFIGTPYWMAPEVIENRSNPVPYDTKADIWSLGITLIELAEAEPPLSEI-HPMKVLFQIPYRDPPKLKNQENYSKDFINFIQSCLQKDPNQRKTATELLKHPFVTNTKEKAVLTDLITKYR 293          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: CCR1_MAIZE (Probable serine/threonine-protein kinase CCRP1 OS=Zea mays GN=CCRP1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.964e-15
Identity = 62/202 (30.69%), Postives = 103/202 (50.99%), Query Frame = 1
Query:   31 DRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQAHSVIGTPEFMAPELYE--EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEPLLIP 624
            D+     + E+  + +L +  K+  R+    V+ +  Q++ G+ YLH     VIHRDLK  N+ +N  + ++KI D GLAA L    ++  +V GTP ++APE+ E    ++  VD +S G+ +  +L    P+ E S+  Q YK++ + +     H      A+  V K L  + SKR    E+L  PFL +    P  +P
Sbjct:  105 DQENVYILLELCPNQSLHDLIKRRKRLTEIEVQCYTLQLICGLKYLHSRR--VIHRDLKLGNLLLNDKM-ELKICDFGLAAKLEFDGEKRKTVCGTPNYIAPEVIEGKGGHSYEVDTWSLGVIIYTLLVGRPPF-ETSDVKQTYKRIKACEYSFPDHVSVSDTAKNLVQKMLTLDPSKRPSLDEILQHPFLKNANNIPKFLP 302          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: TAOK1_RAT (Serine/threonine-protein kinase TAO1 OS=Rattus norvegicus GN=Taok1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 59/189 (31.22%), Postives = 97/189 (51.32%), Query Frame = 1
Query:   70 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELY----EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFLASDAGEPLLI 621
            S  L  ++K    V+I A+ + A   L+G+AYLH H   +IHRD+K  NI +    GQ+K+ D G A++   +  A+S +GTP +MAPE+     E  Y+  VD++S G+  +E+     P    +  + +Y  +   + P           R FV  CL+ + +  P ++ELL   F+  +  E +LI
Sbjct:  113 SDLLEVHKKPLQEVEIAAITHGA---LQGLAYLHSHT--MIHRDIKAGNILLT-EPGQVKLADFGSASM---ASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPETVLI 291          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: TAOK1_MOUSE (Serine/threonine-protein kinase TAO1 OS=Mus musculus GN=Taok1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 59/189 (31.22%), Postives = 97/189 (51.32%), Query Frame = 1
Query:   70 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELY----EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFLASDAGEPLLI 621
            S  L  ++K    V+I A+ + A   L+G+AYLH H   +IHRD+K  NI +    GQ+K+ D G A++   +  A+S +GTP +MAPE+     E  Y+  VD++S G+  +E+     P    +  + +Y  +   + P           R FV  CL+ + +  P ++ELL   F+  +  E +LI
Sbjct:  113 SDLLEVHKKPLQEVEIAAITHGA---LQGLAYLHSHT--MIHRDIKAGNILLT-EPGQVKLADFGSASM---ASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPETVLI 291          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK8_MOUSE (Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 60/199 (30.15%), Postives = 102/199 (51.26%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTR--VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDP 585
            I +Y ++++   +      E    GTL E+ +K     ++   + ++  QIL  + ++H H   ++HRDLK  NI ++ H   +KIGD G++ IL    +A++V+GTP +++PEL E + YN+  DI++ G CVL  L S     E +N   +  K+ SG       R    E R+ V   L    ++R P   ++  P
Sbjct:   64 IEYYENFLE--DKALMIAMEYAPGGTLAEFIQKRCNSLLEEETILHFFVQILLALHHVHTH--LILHRDLKTQNILLDKHRMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALG-CVLYELASLKRAFEAANLPALVLKIMSGTFAPISDR-YSPELRQLVLSLLSLEPAQRPPLSHIMAQP 256          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK8_HUMAN (Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 60/199 (30.15%), Postives = 102/199 (51.26%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTR--VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDP 585
            I +Y ++++   +      E    GTL E+ +K     ++   + ++  QIL  + ++H H   ++HRDLK  NI ++ H   +KIGD G++ IL    +A++V+GTP +++PEL E + YN+  DI++ G CVL  L S     E +N   +  K+ SG       R    E R+ V   L    ++R P   ++  P
Sbjct:   64 IEYYENFLE--DKALMIAMEYAPGGTLAEFIQKRCNSLLEEETILHFFVQILLALHHVHTH--LILHRDLKTQNILLDKHRMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALG-CVLYELASLKRAFEAANLPALVLKIMSGTFAPISDR-YSPELRQLVLSLLSLEPAQRPPLSHIMAQP 256          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK4_HUMAN (Serine/threonine-protein kinase Nek4 OS=Homo sapiens GN=NEK4 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 55/182 (30.22%), Postives = 91/182 (50.00%), Query Frame = 1
Query:  124 VKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPA-KELLLDPFLASDAGEPLLIPQVPSFQNLNPNG 660
            V  W  QI   + YLH  +  ++HRDLK  N+F+      IK+GDLG+A +L      A ++IGTP +M+PEL+  + YN   D+++ G CV EM T  + ++     + +Y ++  GKLP    R    E    +   L    +  P+ + +L  P++       L   ++ + +N   NG
Sbjct:  108 VVEWFVQIAMALQYLH--EKHILHRDLKTQNVFLT-RTNIIKVGDLGIARVLENHCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVY-RIIEGKLP-PMPRDYSPELAELIRTMLSKRPEERPSVRSILRQPYIKRQISFFLEATKIKTSKNNIKNG 284          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK2_ARATH (Serine/threonine-protein kinase Nek2 OS=Arabidopsis thaliana GN=NEK2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 64/208 (30.77%), Postives = 92/208 (44.23%), Query Frame = 1
Query:   73 GTLREYRKKYTRVDIRAVK--NWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFL----------ASDAGEPLLIPQVPSFQNLNPN 657
            G + E  KK   V     K   W  QIL  + YLH +   ++HRD+KC NIF+      I++GD GLA +L     A SV+GTP +M PEL  +  Y    DI+S G C+ EM T+  P  +  +   +  ++    +P    +   A          +N   R  A ELL  P L           +D G  +L  Q P  ++   N
Sbjct:   87 GDMAEAIKKTNGVHFTEEKLCKWLVQILLALEYLHANH--ILHRDVKCSNIFLTKDQ-DIRLGDFGLAKVLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCMYEM-TAMKPAFKAFDMQGLINRINRSIVPPLPAQYSAAFRGLVKSMLRKNPELRPSAAELLRQPLLQPYIQKIHLKVNDPGSNVLPAQWPESESARRN 290          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
NEK4_MOUSE6.098e-1531.45Serine/threonine-protein kinase Nek4 OS=Mus muscul... [more]
NEK5_ARATH7.964e-1531.53Serine/threonine-protein kinase Nek5 OS=Arabidopsi... [more]
DST2_DICDI7.964e-1527.80Serine/threonine-protein kinase dst2 OS=Dictyostel... [more]
CCR1_MAIZE7.964e-1530.69Probable serine/threonine-protein kinase CCRP1 OS=... [more]
TAOK1_RAT1.040e-1431.22Serine/threonine-protein kinase TAO1 OS=Rattus nor... [more]
TAOK1_MOUSE1.040e-1431.22Serine/threonine-protein kinase TAO1 OS=Mus muscul... [more]
NEK8_MOUSE1.040e-1430.15Serine/threonine-protein kinase Nek8 OS=Mus muscul... [more]
NEK8_HUMAN1.040e-1430.15Serine/threonine-protein kinase Nek8 OS=Homo sapie... [more]
NEK4_HUMAN1.040e-1430.22Serine/threonine-protein kinase Nek4 OS=Homo sapie... [more]
NEK2_ARATH1.040e-1430.77Serine/threonine-protein kinase Nek2 OS=Arabidopsi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
back to top