FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK4_RAT (Serine/threonine-protein kinase WNK4 OS=Rattus norvegicus GN=Wnk4 PE=2 SV=3)

HSP 1 Score: 216.468 bits (550), Expect = 1.215e-55
Identity = 103/205 (50.24%), Postives = 143/205 (69.76%), Query Frame = 1
Query:    1 IRFYASWIDVDRRT--FNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAG 606
            +RFY SW  V R       +TE+ TSGTL+ Y +++  +  R ++ W+RQILRG+ +LH   PP++HRDLKCDN+F+ G  G +KIGDLGLA + R S  A SVIGTPEFMAPE+YEE Y+E VD+Y+FGMC+LEM TS+YPYSEC N AQIY+KVTSG  P +F++++  E +  +  C+  + ++R   ++LL   F   + G
Sbjct:  231 VRFYDSWKSVLRGQVCIVLVTELMTSGTLKTYLRRFREMKPRVLQRWSRQILRGLHFLHSRVPPILHRDLKCDNVFITGPSGSVKIGDLGLATLKRASF-AKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGTKPNSFYKVKMPEVKEIIEGCIRTDKNERFTIQDLLTHAFFREERG 434          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WNK4_MOUSE (Serine/threonine-protein kinase WNK4 OS=Mus musculus GN=Wnk4 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.215e-55
Identity = 103/205 (50.24%), Postives = 143/205 (69.76%), Query Frame = 1
Query:    1 IRFYASWIDVDRRT--FNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAG 606
            +RFY SW  V R       +TE+ TSGTL+ Y +++  +  R ++ W+RQILRG+ +LH   PP++HRDLKCDN+F+ G  G +KIGDLGLA + R S  A SVIGTPEFMAPE+YEE Y+E VD+Y+FGMC+LEM TS+YPYSEC N AQIY+KVTSG  P +F++++  E +  +  C+  + ++R   ++LL   F   + G
Sbjct:  231 VRFYDSWKSVLRGQVCIVLVTELMTSGTLKTYLRRFREMKPRVLQRWSRQILRGLHFLHSRVPPILHRDLKCDNVFITGPSGSVKIGDLGLATLKRASF-AKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGTKPNSFYKVKMPEVKEIIEGCIRTDKNERFTIQDLLAHAFFREERG 434          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NRBP_MOUSE (Nuclear receptor-binding protein OS=Mus musculus GN=Nrbp1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24
Identity = 80/234 (34.19%), Postives = 116/234 (49.57%), Query Frame = 1
Query:    1 IRFYASWIDV--DRRTFNFITEMFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFLASDAGEPLLIPQ-VPSFQNLNPNGAVMEL 675
            ++F+  W DV  ++    FITE  +SG+L+++ KK    +  ++ +A K W  QIL  ++YLH  DPP+IH +L CD IF+  H G IKIG +    I    +          F APE  E  +    VDIYSFGMC LEM   +       N    Y  V    +  A   ++D+  R F+ KCL++   R P A+ELL  P L       LL    +   Q++ P  A+ E+
Sbjct:  130 VKFHKYWADVKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ-HNGLIKIGSVAPDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQ----GNGESSY--VPQEAISSAIQLLEDSLQREFIQKCLQSEPARRPTARELLFHPALFEVPSLKLLAAHCIVGHQHMIPENALEEI 356          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NRBP_PONAB (Nuclear receptor-binding protein OS=Pongo abelii GN=NRBP1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.213e-24
Identity = 79/234 (33.76%), Postives = 115/234 (49.15%), Query Frame = 1
Query:    1 IRFYASWIDV--DRRTFNFITEMFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFLASDAGEPLLIPQ-VPSFQNLNPNGAVMEL 675
            ++F+  W D+  ++    FITE  +SG+L+++ KK    +  ++ +A K W  QIL  ++YLH  DPP+IH +L CD IF+  H G IKIG +    I    +          F APE  E  +    VDIYSFGMC LEM   +       N    Y  V    +  A   ++D   R F+ KCL++   R P A+ELL  P L       LL    +   Q++ P  A+ E+
Sbjct:  130 VKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ-HNGLIKIGSVAPDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQ----GNGESSY--VPQEAISSAIQLLEDPLQREFIQKCLQSEPARRPTARELLFHPALFEVPSLKLLAAHCIVGHQHMIPENALEEI 356          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NRBP_MACFA (Nuclear receptor-binding protein OS=Macaca fascicularis GN=NRBP1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.213e-24
Identity = 79/234 (33.76%), Postives = 115/234 (49.15%), Query Frame = 1
Query:    1 IRFYASWIDV--DRRTFNFITEMFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFLASDAGEPLLIPQ-VPSFQNLNPNGAVMEL 675
            ++F+  W D+  ++    FITE  +SG+L+++ KK    +  ++ +A K W  QIL  ++YLH  DPP+IH +L CD IF+  H G IKIG +    I    +          F APE  E  +    VDIYSFGMC LEM   +       N    Y  V    +  A   ++D   R F+ KCL++   R P A+ELL  P L       LL    +   Q++ P  A+ E+
Sbjct:  130 VKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ-HNGLIKIGSVAPDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQ----GNGESSY--VPQEAISSAIQLLEDPLQREFIQKCLQSEPARRPTARELLFHPALFEVPSLKLLAAHCIVGHQHMIPENALEEI 356          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NRBP_HUMAN (Nuclear receptor-binding protein OS=Homo sapiens GN=NRBP1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.213e-24
Identity = 79/234 (33.76%), Postives = 115/234 (49.15%), Query Frame = 1
Query:    1 IRFYASWIDV--DRRTFNFITEMFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFLASDAGEPLLIPQ-VPSFQNLNPNGAVMEL 675
            ++F+  W D+  ++    FITE  +SG+L+++ KK    +  ++ +A K W  QIL  ++YLH  DPP+IH +L CD IF+  H G IKIG +    I    +          F APE  E  +    VDIYSFGMC LEM   +       N    Y  V    +  A   ++D   R F+ KCL++   R P A+ELL  P L       LL    +   Q++ P  A+ E+
Sbjct:  130 VKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ-HNGLIKIGSVAPDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQ----GNGESSY--VPQEAISSAIQLLEDPLQREFIQKCLQSEPARRPTARELLFHPALFEVPSLKLLAAHCIVGHQHMIPENALEEI 356          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K1_ARATH (Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.826e-20
Identity = 71/183 (38.80%), Postives = 99/183 (54.10%), Query Frame = 1
Query:   58 EMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE----EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            E+ T G+L +  ++Y   D   V  + RQIL G+ YLH  D   IHRD+KC NI V+ + G +K+ D GLA + + +    S  GTP +MAPE+      + Y    DI+S G  VLEM T   PYS+   P Q   ++  G LP     +   +AR F+ KCL+ N  +R  A ELL  PF+
Sbjct:  412 ELVTQGSLLKLYQRYQLRD-SVVSLYTRQILDGLKYLH--DKGFIHRDIKCANILVDAN-GAVKLADFGLAKVSKFND-IKSCKGTPFWMAPEVINRKDSDGYGSPADIWSLGCTVLEMCTGQIPYSDL-EPVQALFRIGRGTLPEVPDTL-SLDARLFILKCLKVNPEERPTAAELLNHPFV 587          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K5_MOUSE (Mitogen-activated protein kinase kinase kinase 5 OS=Mus musculus GN=Map3k5 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.403e-19
Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 1
Query:  133 WARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + +QIL G+ YLH  D  ++HRD+K DN+ +N + G +KI D G +  L G +    +  GT ++MAPE+ ++    Y +  DI+S G  ++EM T   P+ E   P     KV   K+         AEA+ F+ KC E +  KR  A +LL+D FL
Sbjct:  790 YTKQILEGLKYLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLIDEFL 945          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K5_HUMAN (Mitogen-activated protein kinase kinase kinase 5 OS=Homo sapiens GN=MAP3K5 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19
Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 1
Query:  133 WARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + +QIL G+ YLH  D  ++HRD+K DN+ +N + G +KI D G +  L G +    +  GT ++MAPE+ ++    Y +  DI+S G  ++EM T   P+ E   P     KV   K+         AEA+ F+ KC E +  KR  A +LL+D FL
Sbjct:  783 YTKQILEGLKYLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 938          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K15_MOUSE (Mitogen-activated protein kinase kinase kinase 15 OS=Mus musculus GN=Map3k15 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19
Identity = 60/172 (34.88%), Postives = 91/172 (52.91%), Query Frame = 1
Query:   91 RKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            R K+  +    +K + +QIL G+ YLH +   ++HRD+K DN+ VN + G +KI D G +  L G +    +  GT ++MAPE+ ++    Y    DI+S G  ++EM TS  P+ E   P     KV   K+         AEAR F+  C E +  KR+ A +LL + FL
Sbjct:  743 RSKWGPMKEPTIKFYTKQILEGLKYLHENQ--IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDQGPRGYGAPADIWSLGCTIIEMATSRPPFHELGEPQAAMFKVGMFKIHPEIPEALSAEARAFILSCFEPDPQKRVTAADLLQEGFL 912          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
WNK4_RAT1.215e-5550.24Serine/threonine-protein kinase WNK4 OS=Rattus nor... [more]
WNK4_MOUSE1.215e-5550.24Serine/threonine-protein kinase WNK4 OS=Mus muscul... [more]
NRBP_MOUSE1.891e-2434.19Nuclear receptor-binding protein OS=Mus musculus G... [more]
NRBP_PONAB4.213e-2433.76Nuclear receptor-binding protein OS=Pongo abelii G... [more]
NRBP_MACFA4.213e-2433.76Nuclear receptor-binding protein OS=Macaca fascicu... [more]
NRBP_HUMAN4.213e-2433.76Nuclear receptor-binding protein OS=Homo sapiens G... [more]
M3K1_ARATH2.826e-2038.80Mitogen-activated protein kinase kinase kinase 1 O... [more]
M3K5_MOUSE1.403e-1936.08Mitogen-activated protein kinase kinase kinase 5 O... [more]
M3K5_HUMAN1.832e-1936.08Mitogen-activated protein kinase kinase kinase 5 O... [more]
M3K15_MOUSE1.832e-1934.88Mitogen-activated protein kinase kinase kinase 15 ... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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