FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 50/193 (25.91%), Postives = 96/193 (49.74%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI---LRGSQQAHSVIGTPEFMAPELYEEDYNE--LVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEP 612
            + E  T G L +    + R+     + + +Q++  + Y H     V HRDLK +N+ ++ + G +K+ D GL+A+   ++     H+  GTP ++APE+ E+   +  + D++S G+ +  +L    P+ E SN   +YKK+++ +    F       A+R + + L+ N   R+   E+L D +       P
Sbjct:   89 VLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAVDYCHSRG--VYHRDLKPENLLLDSY-GNLKVSDFGLSALSQQIKDDGLLHTTCGTPNYVAPEVLEDQGYDGAMADLWSCGVILFVLLAGYLPF-EDSNLMTLYKKISNAEF--TFPPWTSFPAKRLLTRILDPNPMTRVTIPEILEDEWFKKGYKRP 275          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STE20_ASHGO (Serine/threonine-protein kinase STE20 OS=Ashbya gossypii GN=STE20 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 41/114 (35.96%), Postives = 68/114 (59.65%), Query Frame = 1
Query:  136 ARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG 471
            +R+ LRG+ +LH     VIHRD+K DNI ++   G IK+ D G  A +  +  +  +++GTP +MAPE+   ++Y   VDI+S G+ ++EM+  + PY   +    +Y   T+G
Sbjct:  783 SRETLRGLHFLHSKG--VIHRDIKSDNILLSMD-GNIKLTDFGFCAQINETNLKRTTMVGTPYWMAPEVVSRKEYGPKVDIWSLGIMIIEMIEGEPPYLNETPLRALYLIATNG 893          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PSK1_SCHPO (Serine/threonine-protein kinase psk1 OS=Schizosaccharomyces pombe GN=psk1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = 1
Query:  157 IAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL-ENVSKRLPA 564
            +A +H H   +++RDLK +N  ++   G I + D GL+ +        S +GT E+ APE L E+ Y+  VD +S G+ + ++LT   P++  +N  +I +K+T  K    F+   D  AR  + K L +N  +RL A
Sbjct:  201 LALIHLHKLGIVYRDLKPENCLLDAE-GHILLTDFGLSKVAENGADCRSFVGTEEYCAPEILLEQPYDHAVDWWSMGILIFDLLTGSPPFT-ANNHKRIMEKITRAKPNIPFYVTSD--ARDIINKFLKKNPKQRLGA 334          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PLK_DICDI (Probable serine/threonine-protein kinase PLK OS=Dictyostelium discoideum GN=PLK PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 49/209 (23.44%), Postives = 99/209 (47.37%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEED--YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGEPLLIP-----QVPSFQNLNPN 657
            + E+    T+ +  KK   +     K +  Q++  + YLH ++  +IHRDLK  N+F++    +IK+GD GL+  +   ++  ++ GTP ++APE+ +    ++  VD++S G+ +  +L    P+ E S+    Y+++   +       I     +  +   L  V ++ P    +L+    + +  P  +P       PS   +N N
Sbjct:  239 LLELCNQKTVMDIHKKRKYLMEYETKYYVYQVIMAVQYLHNNN--IIHRDLKLGNLFIDNM--RIKLGDFGLSTKVEHGERKKTICGTPNYIAPEILDNSNGHSYEVDVWSIGIILYTLLIGKPPF-ETSDVKHTYQRIKQNQYSFPDEPIISHYGKSLIISILNPVPEQRPNLTQILEHDFFTYSPIPKYLPVSSLTTAPSQSTINQN 442          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PLK3_MOUSE (Serine/threonine-protein kinase PLK3 OS=Mus musculus GN=Plk3 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 58/193 (30.05%), Postives = 91/193 (47.15%), Query Frame = 1
Query:  124 VKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVI-GTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYK--KVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLL--DPFLASDAGEPLLIPQVPSFQNLNPNGAVMELVPK 684
            V+ + RQIL G+ YLH     ++HRDLK  N F+  ++ ++K+GD GLAA L   +Q    I GTP ++APE L  + +    D++S G CV+  L    P  E ++  + Y+  K     LP +        AR+ +   L    +  P+ E +L  D F      + L +    +  +L P      L  K
Sbjct:  163 VRYYLRQILSGLKYLHQRG--ILHRDLKLGNFFITDNM-ELKVGDFGLAARLEPPEQRKKTICGTPNYVAPEVLLRQGHGPEADVWSLG-CVMYTLLCGSPPFETADLKETYRCIKQVHYTLPASL----SLPARQLLAAILRASPRDRPSIEQILRHDFFTKGYTPDRLPVSSCVTVPDLTPPNPARSLFAK 347          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KPCD_RAT (Protein kinase C delta type OS=Rattus norvegicus GN=Prkcd PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 42/127 (33.07%), Postives = 71/127 (55.91%), Query Frame = 1
Query:   49 FITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI-LRGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSDYPY 423
            F+ E    G L  + +   R ++     +A +I+ G+ +LHG    +I+RDLK DN+ ++   G IKI D G+    + G  +A +  GTP+++APE+ +   Y+  VD +SFG+ + EML    P+
Sbjct:  423 FVMEFLNGGDLMFHIQDKGRFELYRATFYAAEIICGLQFLHGKG--IIYRDLKLDNVMLDKD-GHIKIADFGMCKENIFGENRASTFCGTPDYIAPEILQGLKYSFSVDWWSFGVLLYEMLIGQSPF 546          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 52/196 (26.53%), Postives = 96/196 (48.98%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI---LRGSQQAHSVIGTPEFMAPELYEE-DYN-ELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKL--PGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEPL 615
            + E  T G L E      R+     + + +Q++  + Y H     V HRDLK +N+ ++   G +K+ D GL+A+   ++     H+  GTP ++APE+ E+  Y+    DI+S G+ +  +L    P+ E  N   +YKK++  +   P  F       A++ + + L+ N + R+   ++L DP+       P+
Sbjct:   96 VLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRG--VYHRDLKLENLLLDAS-GNLKVSDFGLSALTEQVKADGLLHTTCGTPNYVAPEVIEDRGYDGAAADIWSCGVILYVLLAGFLPF-EDDNIIALYKKISEAQFTCPSWF----STGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPV 283          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: AAPK1_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 43/142 (30.28%), Postives = 74/142 (52.11%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDY--NELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG 471
            + E  + G L +Y  K  R+D +  +   +QIL G+ Y H H   V+HRDLK +N+ ++ H+   KI D GL+ ++   +   +  G+P + APE+          VDI+S G+ +  +L    P+ +   P  ++KK+  G
Sbjct:  103 VMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDG 240          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 43/142 (30.28%), Postives = 74/142 (52.11%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDY--NELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG 471
            + E  + G L +Y  K  R+D +  +   +QIL G+ Y H H   V+HRDLK +N+ ++ H+   KI D GL+ ++   +   +  G+P + APE+          VDI+S G+ +  +L    P+ +   P  ++KK+  G
Sbjct:   98 VMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDG 235          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: AAPK1_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragments) OS=Sus scrofa GN=PRKAA1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 43/142 (30.28%), Postives = 74/142 (52.11%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDY--NELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG 471
            + E  + G L +Y  K  R+D +  +   +QIL G+ Y H H   V+HRDLK +N+ ++ H+   KI D GL+ ++   +   +  G+P + APE+          VDI+S G+ +  +L    P+ +   P  ++KK+  G
Sbjct:   53 VMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDG 190          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
CIPKW_ORYSJ1.406e-1125.91CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
STE20_ASHGO1.836e-1135.96Serine/threonine-protein kinase STE20 OS=Ashbya go... [more]
PSK1_SCHPO1.836e-1132.61Serine/threonine-protein kinase psk1 OS=Schizosacc... [more]
PLK_DICDI1.836e-1123.44Probable serine/threonine-protein kinase PLK OS=Di... [more]
PLK3_MOUSE1.836e-1130.05Serine/threonine-protein kinase PLK3 OS=Mus muscul... [more]
KPCD_RAT1.836e-1133.07Protein kinase C delta type OS=Rattus norvegicus G... [more]
CIPKV_ORYSJ1.836e-1126.53CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]
AAPK1_RAT1.836e-1130.285'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_PONAB1.836e-1130.285'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_PIG1.836e-1130.285'-AMP-activated protein kinase catalytic subunit ... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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