FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: AAPK1_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 43/142 (30.28%), Postives = 74/142 (52.11%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDY--NELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG 471
            + E  + G L +Y  K  R+D +  +   +QIL G+ Y H H   V+HRDLK +N+ ++ H+   KI D GL+ ++   +   +  G+P + APE+          VDI+S G+ +  +L    P+ +   P  ++KK+  G
Sbjct:  103 VMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDG 240          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: AAPK1_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 43/142 (30.28%), Postives = 74/142 (52.11%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDY--NELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG 471
            + E  + G L +Y  K  R+D +  +   +QIL G+ Y H H   V+HRDLK +N+ ++ H+   KI D GL+ ++   +   +  G+P + APE+          VDI+S G+ +  +L    P+ +   P  ++KK+  G
Sbjct:  103 VMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDG 240          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 43/131 (32.82%), Postives = 73/131 (55.73%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQI------LRGIAYLH-GHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA--ILRGSQQAHSVI-GTPEFMAPELYEEDY-NELVDIYSFGMCVLEMLTS 411
            I E   +G L+E+         R + NW  ++       +G+ YLH G  PP++HRD+K  NI +N H  + K+ D GL+   ++ G     +V+ GTP ++ PE +  ++  E  D+YSFG+ +LE++T+
Sbjct:  650 IYEYMANGDLKEHMSGTRN---RFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHF-EAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITN 776          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STK10_MOUSE (Serine/threonine-protein kinase 10 OS=Mus musculus GN=Stk10 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  139 RQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI-LRGSQQAHSVIGTPEFMAPE------LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQ-DAEARRFVGKCLE-NVSKRLPAKELLLDPFLA 594
            RQ+L  + +LHG    +IHRDLK  N+ +    G I++ D G++A  L+  Q+  S IGTP +MAPE      + +  Y+   DI+S G+ ++EM   + P+ E  NP ++  K+     P      +   E R F+   L+ N   R  A +LL  PF++
Sbjct:  139 RQMLEALNFLHGKR--IIHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVLCETMKDAPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLQHPFVS 295          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STE11_YEAST (Serine/threonine-protein kinase STE11 OS=Saccharomyces cerevisiae GN=STE11 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 57/190 (30.00%), Postives = 94/190 (49.47%), Query Frame = 1
Query:   46 NFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLG----LAAILRGSQQAHSVIGTPEFMAPELYEEDYNEL-VDIYSFGMCVLEMLTSDYPYSECSNPAQIYK--KVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            N   E    G++      Y   +   + N+ RQIL G+AYLH  +  +IHRD+K  NI ++   G +KI D G    L+ + +   +  S+ G+  +M+PE+ ++       DI+S G  V+EM T  +P+ + S    I+K    T+ ++P        +E + F+ K  E +   R  A ELL  P+L
Sbjct:  530 NIFLEYVPGGSVSSMLNNYGPFEESLITNFTRQILIGVAYLHKKN--IIHRDIKGANILID-IKGCVKITDFGISKKLSPLNKKQNKRASLQGSVFWMSPEVVKQTATTAKADIWSTGCVVIEMFTGKHPFPDFSQMQAIFKIGTNTTPEIPS----WATSEGKNFLRKAFELDYQYRPSALELLQHPWL 712          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STE11_YEAS7 (Serine/threonine-protein kinase STE11 OS=Saccharomyces cerevisiae (strain YJM789) GN=STE11 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 57/190 (30.00%), Postives = 94/190 (49.47%), Query Frame = 1
Query:   46 NFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLG----LAAILRGSQQAHSVIGTPEFMAPELYEEDYNEL-VDIYSFGMCVLEMLTSDYPYSECSNPAQIYK--KVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            N   E    G++      Y   +   + N+ RQIL G+AYLH  +  +IHRD+K  NI ++   G +KI D G    L+ + +   +  S+ G+  +M+PE+ ++       DI+S G  V+EM T  +P+ + S    I+K    T+ ++P        +E + F+ K  E +   R  A ELL  P+L
Sbjct:  530 NIFLEYVPGGSVSSMLNNYGPFEESLITNFTRQILIGVAYLHKKN--IIHRDIKGANILID-IKGCVKITDFGISKKLSPLNKKQNKRASLQGSVFWMSPEVVKQTATTAKADIWSTGCVVIEMFTGKHPFPDFSQMQAIFKIGTNTTPEIPS----WATSEGKNFLRKAFELDYQYRPSALELLQHPWL 712          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: ST32B_MOUSE (Serine/threonine-protein kinase 32B OS=Mus musculus GN=Stk32b PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 41/137 (29.93%), Postives = 71/137 (51.82%), Query Frame = 1
Query:   31 DRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSDYPY 423
            D      + ++   G LR + ++        VK +  ++   + YL  +   +IHRD+K DNI ++ H G + I D  +A +L+GS++A S+ GT  +MAPE+++        Y+  VD +S G+   E+L    PY
Sbjct:   92 DEEDMFMVVDLLLGGDLRYHLQQNVHFTEGTVKLYICELALALEYLQRYH--IIHRDIKPDNILLDEH-GHVHITDFNIATVLKGSEKASSMAGTKPYMAPEVFQVYVDGGPGYSYPVDWWSLGVTAYELLRGWRPY 225          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: SMKZ_MOUSE (Sperm motility kinase Z OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 52/153 (33.99%), Postives = 83/153 (54.25%), Query Frame = 1
Query:  142 QILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELY-EEDYN-ELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL-ENVSKRLPAKELLLDPFL 591
            Q+L  I Y HG    V+HRDLK DN+ V+ H G +KI D GL A     Q+   + G  +F+ PE++    Y+   VDI++ G+ +  M+T  +P+   S  ++I K+V  G+    ++  +D   R  +G  L  N  +R  A++LL  P+L
Sbjct:  129 QLLSAIGYCHGEG--VVHRDLKPDNVIVDEH-GNVKIVDFGLGARFMPGQKLERLCGAFQFIPPEIFLGLPYDGPKVDIWALGVLLYYMVTGIFPFVG-STLSEISKEVLQGRYEIPYNLSKD--LRSMIGLLLATNARQRPTAQDLLSHPWL 275          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK2_HUMAN (Serine/threonine-protein kinase Nek2 OS=Homo sapiens GN=NEK2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 63/211 (29.86%), Postives = 96/211 (45.50%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTR----VDIRAVKNWARQILRGIAYLH-----GHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL-RGSQQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASD 600
            +R+Y   ID    T   + E    G L     K T+    +D   V     Q+   +   H     GH   V+HRDLK  N+F++G    +K+GD GLA IL   +  A + +GTP +M+PE +    YNE  DI+S G C+L  L +  P     +  ++  K+  GK     +R  D E    + + L       P+ E +L+  L +D
Sbjct:   68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT--VLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG-CLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD-ELNEIITRMLNLKDYHRPSVEEILENPLIAD 273          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: LRK1_CAEEL (Leucine-rich repeat serine/threonine-protein kinase 1 OS=Caenorhabditis elegans GN=lrk-1 PE=1 SV=6)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = 1
Query:   46 NFITEMFTSGTLRE----YRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNI--------FVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELY----EEDYNELVDIYSFGMCVLEMLTSDYPY 423
            + + E+   G L +    +RK  T++ +  +K  A Q+ R + YLH     +I+RDLK +N+        F       +K+GD G++  +  S  A    GT  FMAPE+     EE+Y + VD +SFGM + E+LT  +P+
Sbjct: 1794 SLVVELAPLGALNQLLGSHRKAGTKLSLGVIKESAVQVARALEYLHSAH--IIYRDLKSENVLGWRFPAPFSPQTDVLLKLGDYGISRSVLPSGGAKGFGGTEGFMAPEIVRFNGEEEYTQKVDCFSFGMFLYELLTLKFPF 1933          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
AAPK1_MOUSE1.836e-1130.285'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_HUMAN1.836e-1130.285'-AMP-activated protein kinase catalytic subunit ... [more]
Y5182_ARATH2.398e-1132.82Probable LRR receptor-like serine/threonine-protei... [more]
STK10_MOUSE2.398e-1132.92Serine/threonine-protein kinase 10 OS=Mus musculus... [more]
STE11_YEAST2.398e-1130.00Serine/threonine-protein kinase STE11 OS=Saccharom... [more]
STE11_YEAS72.398e-1130.00Serine/threonine-protein kinase STE11 OS=Saccharom... [more]
ST32B_MOUSE2.398e-1129.93Serine/threonine-protein kinase 32B OS=Mus musculu... [more]
SMKZ_MOUSE2.398e-1133.99Sperm motility kinase Z OS=Mus musculus PE=2 SV=1[more]
NEK2_HUMAN2.398e-1129.86Serine/threonine-protein kinase Nek2 OS=Homo sapie... [more]
LRK1_CAEEL2.398e-1132.39Leucine-rich repeat serine/threonine-protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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