FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K15_HUMAN (Mitogen-activated protein kinase kinase kinase 15 OS=Homo sapiens GN=MAP3K15 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.392e-19
Identity = 68/201 (33.83%), Postives = 100/201 (49.75%), Query Frame = 1
Query:   91 RKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS-DAGEPLLIPQVPSFQNLNPNGAVMEL 675
            R K+  +    +K + +QIL G+ YLH +   ++HRD+K DN+ VN + G +KI D G +  L G +    +  GT ++MAPE+ ++    Y    DI+S G  ++EM TS  P+ E   P     KV   K+         AEAR F+  C E +  KR    ELL + FL   + G+   I   PS     P G V+ L
Sbjct:  739 RSKWGPMKEPTIKFYTKQILEGLKYLHENQ--IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGVNPCTETFTGTLQYMAPEIIDQGPRGYGAPADIWSLGCTIIEMATSKPPFHELGEPQAAMFKVGMFKIHPEIPEALSAEARAFILSCFEPDPHKRATTAELLREGFLRQVNKGKKNRIAFKPS---EGPRGVVLAL 934          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: Y1199_DICDI (Probable serine/threonine-protein kinase DDB_G0282895 OS=Dictyostelium discoideum GN=DDB_G0282895 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.124e-19
Identity = 56/183 (30.60%), Postives = 91/183 (49.73%), Query Frame = 1
Query:   34 RRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLL 579
            + TF  +TE+   GTL E   K   + +  +  +A  + +G+AYLH  D   IHRD+K  NI V+ +    K+GD GL+ ++  +    +V GTP++ +PE L  E Y    D+YS+GM + E+ T D P+ E  +  ++ + V   KL               +  CL N  K+ P    ++
Sbjct: 1447 KSTFMIVTELMHKGTLLEVINKNKPLSLEDIIKYALSVAQGLAYLHSVD--FIHRDIKAANILVDKN-NNAKVGDFGLSRVIDNNFNMTAVAGTPKWESPECLMGEAYTSASDVYSYGMMLFELATGDEPFLEIQSIVELARSVCDKKLKPKISSSVPNFISSLIKDCLHNSPKKRPTMNQII 1626          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: MKCD_DICDI (Probable serine/threonine-protein kinase mkcD OS=Dictyostelium discoideum GN=mkcD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.025e-18
Identity = 61/183 (33.33%), Postives = 98/183 (53.55%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNEL-VDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDA-EARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            I E  + GTL+     +   + R +    R+IL+G+ YLH  +  + HRDLK  N+ VN   G+IK+ D GL       ++  +++G+P +++PE+   + + L  DI+SFG+C LEML    PY +    A ++    +  LP        + E R F+  CL+ + SKRL + +LL  PFL
Sbjct:  448 IMEFLSGGTLKNAASNFKFCE-RKIAYVCREILQGLDYLHKQN--IAHRDLKSANVMVNDK-GEIKLIDFGLCIDFSIEKEEINMLGSPSYISPEMINGNPHSLSTDIWSFGICALEMLLGKLPYHDSRLKAMVFVATNNLNLPLLLSTTTSSLEFRDFLTNCLQFDPSKRLTSSQLLQHPFL 626          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K3_HUMAN (Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.645e-18
Identity = 62/201 (30.85%), Postives = 96/201 (47.76%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLG----LAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPF 588
            +++Y    D   +T     E    G++++  K Y  +     + + RQIL G++YLH +   ++HRD+K  NI +    G +K+GD G    L  I        SV GTP +M+PE+   E Y    D++S G  V+EMLT   P++E    A I+K  T    P     I +   R F+ +      +R  A+ELL   F
Sbjct:  425 VQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN--MIVHRDIKGANI-LRDSAGNVKLGDFGASKRLQTICMSGTGMRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISE-HGRDFLRRIFVEARQRPSAEELLTHHF 621          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NRBP_DROME (Nuclear receptor-binding protein homolog OS=Drosophila melanogaster GN=Madm PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.893e-18
Identity = 65/211 (30.81%), Postives = 102/211 (48.34%), Query Frame = 1
Query:    1 IRFYASWIDV---DRRTFNFITEMFTSGTLREYRKKYTR----VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIG----DLGLAAILRG-SQQAHSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFL 591
            ++F+  W D    +R    FITE  +SG+L+++ K+  R    + + + + W  QIL  ++YLH   PP+IH +L CD+IF+  H G +KIG    D    ++ RG  ++     G   F APE    D     +DIY+FGMC LEM   +   S   + A     +    +      +++   R  + KCL    +  P A +LL  P L
Sbjct:  171 VKFHRYWTDTQQAERPRVVFITEYMSSGSLKQFLKRTKRNAKRLPLESWRRWCTQILSALSYLHSCSPPIIHGNLTCDSIFIQ-HNGLVKIGSVVPDAVHYSVRRGRERERERERGAHYFQAPEYGAADQLTAALDIYAFGMCALEMAALEIQPSNSESTA-----INEETIQRTIFSLENDLQRDLIRKCLNPQPQDRPSANDLLFHPLL 375          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K2_MOUSE (Mitogen-activated protein kinase kinase kinase 2 OS=Mus musculus GN=Map3k2 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.893e-18
Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLG----LAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFL 591
            +++Y    D   +T +   E+   G++++  K Y  +     + + RQIL G+ YLH +   ++HRD+K  NI +    G IK+GD G    L  I        SV GTP +M+PE+   E Y    DI+S    V+EMLT   P++E    A I+K  T    P     + D   R F+ +       R  A+ELL   F+
Sbjct:  419 VQYYGCLRDPQEKTLSIFMELSPGGSIKDQLKAYGALTENVTRKYTRQILEGVHYLHSN--MIVHRDIKGANI-LRDSTGNIKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVACTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPKLPPHVSD-YTRDFLKRIFVEAKLRPSAEELLRHMFV 616          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M2K2_ARATH (Mitogen-activated protein kinase kinase 2 OS=Arabidopsis thaliana GN=MKK2 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.893e-18
Identity = 64/217 (29.49%), Postives = 105/217 (48.39%), Query Frame = 1
Query:   31 DRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYS------ECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL-------------ASDAGEPL 615
            D    + I E    G+L ++ K    +    +    RQ+L+G+ YLH HD  +IHRDLK  N+ +N H G++KI D G++ ++  +   A++ +GT  +M+PE +    Y    DI+S G+ VLE  T  +PY+        ++  ++ + +     P         E   F+  CL+ + + R  AKEL+  PFL              +DAG PL
Sbjct:  137 DNGAISLILEYMDGGSLADFLKSVKAIPDSYLSAIFRQVLQGLIYLH-HDRHIIHRDLKPSNLLIN-HRGEVKITDFGVSTVMTNTAGLANTFVGTYNYMSPERIVGNKYGNKSDIWSLGLVVLECATGKFPYAPPNQEETWTSVFELMEAIVDQPPPALPSGNFSPELSSFISTCLQKDPNSRSSAKELMEHPFLNKYDYSGINLASYFTDAGSPL 351          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: ZYG1_CAEEL (Probable serine/threonine-protein kinase zyg-1 OS=Caenorhabditis elegans GN=zyg-1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17
Identity = 57/211 (27.01%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQ---IKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEPLLI 621
            + FY  +++ D  T+  + E+   G+L+ Y +++  +D     +  RQ++  ++++H  +  VIHRDL   N+F+     +   +K+GD GLA  L   +   +++GTP F+AP++Y+++Y +  D+YS G  +  MLT+  P  +   P       T G  P          A R V + ++ +  KR+P  +++L  F+  +  E  +I
Sbjct:   69 VEFYEDFVE-DGYTY-IVMELCEGGSLQAYVREHGALDDATAVHVLRQLISAVSFMHRVN--VIHRDLSAGNVFIKDSKKKKMTVKLGDFGLATTLGRGETTCTIVGTPGFIAPQVYDQEYTQSADVYSLGAVLYTMLTARNPPPKGLPP-------TCGMSP---------NAARLVEQMMDTDAKKRIPLTQIVLSEFMYENTNENAVI 259          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17
Identity = 70/195 (35.90%), Postives = 100/195 (51.28%), Query Frame = 1
Query:   31 DRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTP--EFMAPELY-----EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            D        E+ T G+LR+  ++    D   V  + RQIL G+ YLH  D   IHR++KC N+ V+ + G +K+ D GLA ++       S+  TP   +MAPE+       + Y    DI+S G  VLEMLT   PYS+      +Y  + +GKLP     I   +AR F+  CL+ N  +R  A ELL  PF+
Sbjct: 1696 DESNLYIFLELVTQGSLRKLYQRNQLGD-SVVSLYTRQILDGLKYLH--DKGFIHRNIKCANVLVDAN-GTVKLADFGLAKVM-------SLWRTPYWNWMAPEVILNPKDYDGYGTPADIWSLGCTVLEMLTGQIPYSDLEIGTALY-NIGTGKLP-KIPDILSLDARDFILTCLKVNPEERPTAAELLNHPFV 1877          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAKB_DICDI (Serine/threonine-protein kinase pakB OS=Dictyostelium discoideum GN=pakB PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17
Identity = 65/196 (33.16%), Postives = 99/196 (50.51%), Query Frame = 1
Query:   58 EMFTSGTLREYRKKYTRVDI--RAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH-SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEPLLIPQV 630
            E    G L E  +++  V +    +     + L+G+AY+H      IHRD+K DNI + G  G +K+ D G AA L  S+Q   +++GTP +MAPEL   ++Y+  VDI+S G+  +EM  S+ PY        ++   T G            + + FV KCL+ +V  R  AK LL  PFL +      L+P +
Sbjct:  644 EFMGGGCLTEILEQFNSVKLVEAQIAYVCAETLKGLAYIHSQHR--IHRDIKSDNILL-GSDGSVKLADFGYAAQLTKSKQKRVTIVGTPYWMAPELIRGQNYDRKVDIWSLGIMAMEMAESEPPYMSFPPLRALFLITTKGIPDLKDQNKWSDDFKDFVKKCLDKDVENRPEAKVLLNHPFLKTACNSNGLVPAI 836          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
M3K15_HUMAN2.392e-1933.83Mitogen-activated protein kinase kinase kinase 15 ... [more]
Y1199_DICDI3.124e-1930.60Probable serine/threonine-protein kinase DDB_G0282... [more]
MKCD_DICDI2.025e-1833.33Probable serine/threonine-protein kinase mkcD OS=D... [more]
M3K3_HUMAN2.645e-1830.85Mitogen-activated protein kinase kinase kinase 3 O... [more]
NRBP_DROME5.893e-1830.81Nuclear receptor-binding protein homolog OS=Drosop... [more]
M3K2_MOUSE5.893e-1831.19Mitogen-activated protein kinase kinase kinase 2 O... [more]
M2K2_ARATH5.893e-1829.49Mitogen-activated protein kinase kinase 2 OS=Arabi... [more]
ZYG1_CAEEL1.005e-1727.01Probable serine/threonine-protein kinase zyg-1 OS=... [more]
WRK19_ARATH1.005e-1735.90Probable WRKY transcription factor 19 OS=Arabidops... [more]
PAKB_DICDI1.313e-1733.16Serine/threonine-protein kinase pakB OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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