FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KPCD_CANFA (Protein kinase C delta type OS=Canis familiaris GN=PRKCD PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 42/127 (33.07%), Postives = 71/127 (55.91%), Query Frame = 1
Query:   49 FITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI-LRGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSDYPY 423
            F+ E    G L  + +   R ++     +A +I+ G+ +LH     +I+RDLK DN+ ++   G IKI D G+    + G +QA +  GTP+++APE+ +   Y+  VD +SFG+ + EML    P+
Sbjct:  423 FVMEFLNGGDLMYHIQDKGRFELYRATFYAAEIVCGLQFLHNKG--IIYRDLKLDNVMLDQD-GHIKIADFGMCKENIFGEKQASTFCGTPDYIAPEILQGLKYSFSVDWWSFGVLLYEMLIGQSPF 546          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KPC1_CANAL (Protein kinase C-like 1 OS=Candida albicans GN=PKC1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 46/127 (36.22%), Postives = 69/127 (54.33%), Query Frame = 1
Query:   49 FITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVI-GTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPY 423
            F+ E  + G L  + +K  R   +  K +A ++L G+ Y H  D  +++RDLK DNI +    G IKIGD GL       +   S   GTPEFMAPE+   + Y+  VD ++FG+ + +ML    P+
Sbjct:  848 FVMEYISGGDLMWHIQK-NRFTAKRAKFYACEVLLGLKYFH--DNGIVYRDLKLDNILLTTK-GHIKIGDYGLCKEDMWHKSTTSTFCGTPEFMAPEIVAGKAYDRSVDWWAFGVLLFQMLLCQSPF 970          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KCC2D_XENLA (Calcium/calmodulin-dependent protein kinase type II delta chain OS=Xenopus laevis GN=camk2d PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 57/192 (29.69%), Postives = 100/192 (52.08%), Query Frame = 1
Query:   43 FNFIT--EMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL--GQIKIGDLGLAAILRGSQQA-HSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG--KLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            F+ +T  E+F     REY   Y+  D     +  +QIL  + + H +   ++HRDLK +N+ +   L    +K+ D GLA  ++G QQA     GTP +++PE+  +D Y + VD+++ G+ +L +L   YP     +  ++Y+++ +G    P         EA+  + K L  N +KR+ A E L  P++
Sbjct:   89 FDLVTGGELFEDIVAREY---YSEAD---ASHCIQQILESVNHCHLNG--IVHRDLKPENLLLASKLKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRINATEALRHPWI 271          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: CDC5_YEAST (Cell cycle serine/threonine-protein kinase CDC5/MSD2 OS=Saccharomyces cerevisiae GN=CDC5 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 46/141 (32.62%), Postives = 79/141 (56.03%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELY---EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKV 462
            + E+  +G+L E  K+   +    V+ +  QI   I Y+H     VIHRDLK  NIF + +   +KIGD GLAA+L   S++ +++ GTP ++APE+       ++  VDI+S G+ +  +L    P+ +  +   IY+++
Sbjct:  157 LLEICPNGSLMELLKRRKVLTEPEVRFFTTQICGAIKYMHSRR--VIHRDLKLGNIFFDSNY-NLKIGDFGLAAVLANESERKYTICGTPNYIAPEVLMGKHSGHSFEVDIWSLGVMLYALLIGKPPF-QARDVNTIYERI 293          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: YTYK2_DICDI (Probable tyrosine-protein kinase DDB_G0283397 OS=Dictyostelium discoideum GN=DDB_G0283397 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  136 ARQILRGIAYLHGH--DPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYS 426
            AR I  G+ YLH +  + P++HRDL   NI +N      KI D GL+  ++ G  +  + +G+  +MAPE ++ E+Y E VD+YSF + + E++T   PY+
Sbjct:  284 ARDIAEGMNYLHTNFKEGPIVHRDLTSSNILLNSSYTVAKINDFGLSKEMKPGPTEMTAAMGSLAWMAPECFKAENYTEKVDVYSFAIILWEIVTCRDPYN 384          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 1
Query:  151 RGIAYLH-GHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH---SVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTS 411
            +G+ YLH G  PP++HRD+K  NI ++ H  Q K+ D GL+       + H   +V GTP ++ PE Y  +  NE  D+YSFG+ +LE++TS
Sbjct:  681 QGLEYLHTGCKPPMVHRDVKTTNILLDEHF-QAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITS 771          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STK6_MOUSE (Serine/threonine-protein kinase 6 OS=Mus musculus GN=Aurka PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 53/206 (25.73%), Postives = 104/206 (50.49%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEP 612
            +R Y  + D  R     I E    GT+    +K ++ D +    +  ++   ++Y H     VIHRD+K +N+ + G  G++KI D G +     S++  ++ GT +++ PE+ E   ++E VD++S G+   E L    P+ E     + Y++++  ++   F       AR  + + L+ N S+RL   E+L  P++ +++ +P
Sbjct:  185 LRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRT-TMCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-EAHTYQETYRRIS--RVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 381          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STE11_YEAS6 (Serine/threonine-protein kinase STE11 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=STE11 PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 57/190 (30.00%), Postives = 93/190 (48.95%), Query Frame = 1
Query:   46 NFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLG----LAAILRGSQQAHSVIGTPEFMAPELYEEDYNEL-VDIYSFGMCVLEMLTSDYPYSECSNPAQIYK--KVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            N   E    G++      Y   +   + N+ RQIL G+AYL  H   +IHRD+K  NI ++   G +KI D G    L+ + +   +  S+ G+  +M+PE+ ++       DI+S G  V+EM T  +P+ + S    I+K    T+ ++P        +E + F+ K  E +   R  A ELL  P+L
Sbjct:  530 NIFLEYVPGGSVSSMLNNYGPFEESLITNFTRQILIGVAYL--HKKKIIHRDIKGANILID-IKGCVKITDFGISKKLSPLNKKQNKRASLQGSVFWMSPEVVKQSATTAKADIWSTGCVVIEMFTGKHPFPDFSQMQAIFKIGTNTTPEIPS----WATSEGKNFLRKAFELDYQYRPGALELLQHPWL 712          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: RIPK2_HUMAN (Receptor-interacting serine/threonine-protein kinase 2 OS=Homo sapiens GN=RIPK2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 50/156 (32.05%), Postives = 74/156 (47.44%), Query Frame = 1
Query:   52 ITEMFTSGTLRE--YRK-KYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA-ILRGSQQAHSVIGTPE-----FMAPELYEEDYNELV----DIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLP 480
            +TE   +G+L E  +RK +Y  V          +I  G+ YLH   PP++H DLK  NI ++     +KI D GL+   +    Q+ S    PE     +M PE YE           DIYS+ +   E+L+   P+ + +NP QI   V+ G  P
Sbjct:   94 VTEYMPNGSLNELLHRKTEYPDVAWPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEF-HVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIIYMPPENYEPGQKSRASIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRP 248          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PMYT1_DROME (Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase OS=Drosophila melanogaster GN=Myt1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 49/198 (24.75%), Postives = 93/198 (46.97%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            IRF  +W   DR    ++       +L +Y  +  R+    + +    +LRG+  LH  D  +IH D+K DN+ +       K+ D GL   +  +   H+  G   +MAPE+ +  +++  DI+S G+ +LE+      Y +  +   ++ ++  G LP  F      E +  +   ++ + ++R  A++LL  P L
Sbjct:  163 IRFIRAWEQYDRL---YMQMELCRESLEQYLLRCQRIPEERIWHILLDLLRGLKSLH--DRNLIHLDIKLDNVLIGEDDETCKLADFGLVIDVDRANSHHATEGDSRYMAPEILQGHFSKAADIFSLGIAMLELAC----YMDLPSNGPLWHELRHGILPEEFINKISLELQSVIKSMMKPDPAQRPTAEQLLSHPKL 351          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
KPCD_CANFA2.398e-1133.07Protein kinase C delta type OS=Canis familiaris GN... [more]
KPC1_CANAL2.398e-1136.22Protein kinase C-like 1 OS=Candida albicans GN=PKC... [more]
KCC2D_XENLA2.398e-1129.69Calcium/calmodulin-dependent protein kinase type I... [more]
CDC5_YEAST2.398e-1132.62Cell cycle serine/threonine-protein kinase CDC5/MS... [more]
YTYK2_DICDI3.132e-1137.62Probable tyrosine-protein kinase DDB_G0283397 OS=D... [more]
Y2289_ARATH3.132e-1141.30Probable LRR receptor-like serine/threonine-protei... [more]
STK6_MOUSE3.132e-1125.73Serine/threonine-protein kinase 6 OS=Mus musculus ... [more]
STE11_YEAS63.132e-1130.00Serine/threonine-protein kinase STE11 OS=Saccharom... [more]
RIPK2_HUMAN3.132e-1132.05Receptor-interacting serine/threonine-protein kina... [more]
PMYT1_DROME3.132e-1124.75Membrane-associated tyrosine- and threonine-specif... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
back to top